CircRNA Information

General Information
circRNA Basic Information
CircID chr2:238451211|238451359
Strand +
CircType exon
Host Gene ENSG00000065802.10;
Algorism CIRI2;
Sequence CTAGTATATCTAAGAGATCTTGAAATCAAAGCAACATAAAAAAGAGAGACTCGCCTGCAATCCAGGCACTGAGCAACGACATGTCAAGGCAACAGAAATCCCCCTCCTGCCCCCACTCACTTCTCCATCCCACTGTCTGCTGAGAATTT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr2:238451211|238451359 hsa-miR-148a-5p 0 0 1
chr2:238451211|238451359 hsa-miR-148a-3p 0 0 1
chr2:238451211|238451359 hsa-miR-214-5p 0 0 1
chr2:238451211|238451359 hsa-miR-214-3p 0 0 1
chr2:238451211|238451359 hsa-miR-152-5p 0 0 1
chr2:238451211|238451359 hsa-miR-152-3p 0 0 1
chr2:238451211|238451359 hsa-miR-148b-5p 0 0 1
chr2:238451211|238451359 hsa-miR-148b-3p 0 0 1
chr2:238451211|238451359 hsa-miR-489-5p 0 0 1
chr2:238451211|238451359 hsa-miR-489-3p 0 0 1
chr2:238451211|238451359 hsa-miR-498-5p 0 0 1
chr2:238451211|238451359 hsa-miR-498-3p 0 0 1
chr2:238451211|238451359 hsa-miR-519e-5p 0 0 1
chr2:238451211|238451359 hsa-miR-519e-3p 0 0 1
chr2:238451211|238451359 hsa-miR-661 0 0 1
chr2:238451211|238451359 hsa-miR-922 0 0 1
chr2:238451211|238451359 hsa-miR-1178-5p 0 0 1
chr2:238451211|238451359 hsa-miR-1178-3p 0 0 1
chr2:238451211|238451359 hsa-miR-1267 0 0 1
chr2:238451211|238451359 hsa-miR-1324 0 0 1
chr2:238451211|238451359 hsa-miR-486-3p 0 0 1
chr2:238451211|238451359 hsa-miR-515-3p 0 0 1
chr2:238451211|238451359 hsa-miR-876-5p 0 0 1
chr2:238451211|238451359 hsa-miR-550 0 0 1
chr2:238451211|238451359 hsa-miR-1254 0 0 1
chr2:238451211|238451359 hsa-miR-184 1 0 0
chr2:238451211|238451359 hsa-miR-608 1 0 0
chr2:238451211|238451359 hsa-miR-637 1 0 0
chr2:238451211|238451359 hsa-miR-765 1 0 0
chr2:238451211|238451359 hsa-miR-3132 1 0 0
chr2:238451211|238451359 hsa-miR-3141 1 0 0
chr2:238451211|238451359 hsa-miR-1193 1 0 0
chr2:238451211|238451359 hsa-miR-3196 1 0 0
chr2:238451211|238451359 hsa-miR-4271 1 0 0
chr2:238451211|238451359 hsa-miR-3652 1 0 0
chr2:238451211|238451359 hsa-miR-4447 1 0 0
chr2:238451211|238451359 hsa-miR-4466 1 0 0
chr2:238451211|238451359 hsa-miR-4488 1 0 0
chr2:238451211|238451359 hsa-miR-4507 1 0 0
chr2:238451211|238451359 hsa-miR-4516 1 1 0
chr2:238451211|238451359 hsa-miR-4533 1 0 0
chr2:238451211|238451359 hsa-miR-4534 1 1 0
chr2:238451211|238451359 hsa-miR-1587 1 0 0
chr2:238451211|238451359 hsa-miR-4651 1 0 0
chr2:238451211|238451359 hsa-miR-4654 1 1 0
chr2:238451211|238451359 hsa-miR-4657 1 0 0
chr2:238451211|238451359 hsa-miR-4688 1 0 0
chr2:238451211|238451359 hsa-miR-4710 1 0 0
chr2:238451211|238451359 hsa-miR-4739 1 0 0
chr2:238451211|238451359 hsa-miR-5093 1 0 0
chr2:238451211|238451359 hsa-miR-5572 1 0 0
chr2:238451211|238451359 hsa-miR-5703 1 0 0
chr2:238451211|238451359 hsa-miR-5787 1 0 0
chr2:238451211|238451359 hsa-miR-6127 1 0 0
chr2:238451211|238451359 hsa-miR-6745 1 0 0
chr2:238451211|238451359 hsa-miR-12114 1 0 0
chr2:238451211|238451359 hsa-miR-12118 1 0 0
chr2:238451211|238451359 hsa-miR-4433b-3p 1 0 0
chr2:238451211|238451359 hsa-miR-4433a-3p 1 0 0
chr2:238451211|238451359 hsa-miR-7106-5p 1 0 0
chr2:238451211|238451359 hsa-miR-6728-5p 1 1 0
chr2:238451211|238451359 hsa-miR-5187-5p 1 0 0
chr2:238451211|238451359 hsa-miR-1227-5p 1 0 0
chr2:238451211|238451359 hsa-miR-6757-5p 1 0 0
chr2:238451211|238451359 hsa-miR-6880-5p 1 0 0
chr2:238451211|238451359 hsa-miR-4695-5p 1 0 0
chr2:238451211|238451359 hsa-miR-4722-5p 1 1 0
chr2:238451211|238451359 hsa-miR-6890-5p 1 0 0
chr2:238451211|238451359 hsa-miR-6727-5p 1 0 0
chr2:238451211|238451359 hsa-miR-6759-5p 1 0 0
chr2:238451211|238451359 hsa-miR-6721-5p 0 1 0
chr2:238451211|238451359 hsa-miR-197-5p 1 0 0
chr2:238451211|238451359 hsa-miR-6742-5p 1 0 0
chr2:238451211|238451359 hsa-miR-3180-3p 1 0 0
chr2:238451211|238451359 hsa-miR-6748-5p 1 0 0
chr2:238451211|238451359 hsa-miR-6796-5p 1 0 0
chr2:238451211|238451359 hsa-miR-6798-5p 1 0 0
chr2:238451211|238451359 hsa-miR-6760-5p 1 0 0
chr2:238451211|238451359 hsa-miR-6782-5p 1 0 0
chr2:238451211|238451359 hsa-miR-6786-5p 1 0 0
chr2:238451211|238451359 hsa-miR-7109-5p 1 0 0
chr2:238451211|238451359 hsa-miR-1229-5p 1 0 0
chr2:238451211|238451359 hsa-miR-885-3p 1 0 0
chr2:238451211|238451359 hsa-miR-4764-5p 1 0 0
chr2:238451211|238451359 hsa-miR-1228-5p 1 0 0
chr2:238451211|238451359 hsa-miR-6847-5p 1 0 0
chr2:238451211|238451359 hsa-miR-149-3p 1 0 0
chr2:238451211|238451359 hsa-miR-194-3p 1 0 0
chr2:238451211|238451359 hsa-miR-4638-5p 1 0 0
chr2:238451211|238451359 hsa-miR-4727-3p 1 0 0
chr2:238451211|238451359 hsa-miR-6767-5p 1 0 0
chr2:238451211|238451359 hsa-miR-6733-3p 0 1 0
chr2:238451211|238451359 hsa-miR-1233-5p 1 0 0
chr2:238451211|238451359 hsa-miR-4763-3p 1 0 0
chr2:238451211|238451359 hsa-miR-6778-5p 1 0 0
chr2:238451211|238451359 hsa-miR-6787-5p 1 0 0
chr2:238451211|238451359 hsa-miR-6812-5p 1 0 0
chr2:238451211|238451359 hsa-miR-6816-5p 1 0 0
chr2:238451211|238451359 hsa-miR-6870-5p 1 0 0
chr2:238451211|238451359 hsa-miR-5001-5p 1 0 0
chr2:238451211|238451359 hsa-miR-6737-5p 1 0 0
chr2:238451211|238451359 hsa-miR-6743-5p 1 0 0
chr2:238451211|238451359 hsa-miR-6756-5p 1 1 0
chr2:238451211|238451359 hsa-miR-6803-5p 1 0 0
chr2:238451211|238451359 hsa-miR-6819-5p 1 0 0
chr2:238451211|238451359 hsa-miR-11181-3p 1 0 0
chr2:238451211|238451359 hsa-miR-1249-5p 1 0 0
chr2:238451211|238451359 hsa-miR-6751-5p 1 0 0
chr2:238451211|238451359 hsa-miR-6780a-5p 1 0 0
chr2:238451211|238451359 hsa-miR-6879-5p 1 0 0
chr2:238451211|238451359 hsa-miR-7111-5p 1 0 0
chr2:238451211|238451359 hsa-miR-3620-5p 1 0 0
chr2:238451211|238451359 hsa-miR-6780b-5p 1 0 0
chr2:238451211|238451359 hsa-miR-1237-5p 1 0 0
chr2:238451211|238451359 hsa-miR-1909-3p 1 0 0
chr2:238451211|238451359 hsa-miR-328-5p 1 1 0
chr2:238451211|238451359 hsa-miR-4745-5p 1 1 0
chr2:238451211|238451359 hsa-miR-6846-5p 1 0 0
chr2:238451211|238451359 hsa-miR-6848-5p 1 0 0
chr2:238451211|238451359 hsa-miR-4697-5p 1 0 0
chr2:238451211|238451359 hsa-miR-1238-5p 0 1 0
chr2:238451211|238451359 hsa-miR-4758-5p 1 1 0
chr2:238451211|238451359 hsa-miR-4769-5p 1 1 0
chr2:238451211|238451359 hsa-miR-6511b-5p 1 0 0
chr2:238451211|238451359 hsa-miR-3940-5p 1 0 0
chr2:238451211|238451359 hsa-miR-1271-3p 0 1 0
chr2:238451211|238451359 hsa-miR-6736-5p 1 0 0
chr2:238451211|238451359 hsa-miR-6891-5p 1 0 0
chr2:238451211|238451359 hsa-miR-6766-5p 1 0 0
chr2:238451211|238451359 hsa-miR-6790-5p 1 0 0
chr2:238451211|238451359 hsa-miR-33b-3p 0 1 0
chr2:238451211|238451359 hsa-miR-3619-5p 1 0 0
chr2:238451211|238451359 hsa-miR-6839-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr2:238451211|238451359
ORF Type ORF1
Protein Length 43
Nucleotide Length 129
Protein Sequence MKSKQHKKERLACNPGTEQRHVKATEIPLLPPLTSPSHCLLRI
Nucleotide Sequence TTGAAATCAAAGCAACATAAAAAAGAGAGACTCGCCTGCAATCCAGGCACTGAGCAACGACATGTCAAGGCAACAGAAATCCCCCTCCTGCCCCCACTCACTTCTCCATCCCACTGTCTGCTGAGAATT
CircID chr2:238451211|238451359
ORF Type ORF2
Protein Length 25
Nucleotide Length 78
Protein Sequence MTCRCSVPGLQASLSFLCCFDFKIS
Nucleotide Sequence TTGACATGTCGTTGCTCAGTGCCTGGATTGCAGGCGAGTCTCTCTTTTTTATGTTGCTTTGATTTCAAGATCTCTTAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab