CircRNA Information

General Information
circRNA Basic Information
CircID chr2:240578082|240578247
Strand -
CircType exon
Host Gene ENSG00000142327.10;
Algorism CIRI2;
Sequence CTGGCCTCCCCACTCCCAGCTCTCTTGCACTGCAGGCCCTGGGGCCAGCCCGCACACACCATGCCTCCTGTCTCAACACTGACAGCTGTGCCTAGCCCCGGATGCCAGCACCTGCCAGGTGCCGCCCCGGGGCAAGGGCCCCAGCAGCCCTATGGTGACCGCCACA
circRNA Expression in different cancers

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circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr2:240578082|240578247 hsa-miR-148a-5p 0 0 1
chr2:240578082|240578247 hsa-miR-148a-3p 0 0 1
chr2:240578082|240578247 hsa-miR-223-5p 0 0 1
chr2:240578082|240578247 hsa-miR-223-3p 0 0 1
chr2:240578082|240578247 hsa-miR-130a-5p 0 0 1
chr2:240578082|240578247 hsa-miR-130a-3p 0 0 1
chr2:240578082|240578247 hsa-miR-152-5p 0 0 1
chr2:240578082|240578247 hsa-miR-152-3p 0 0 1
chr2:240578082|240578247 hsa-miR-301a-5p 0 0 1
chr2:240578082|240578247 hsa-miR-301a-3p 0 0 1
chr2:240578082|240578247 hsa-miR-130b-5p 0 0 1
chr2:240578082|240578247 hsa-miR-130b-3p 0 0 1
chr2:240578082|240578247 hsa-miR-148b-5p 0 0 1
chr2:240578082|240578247 hsa-miR-148b-3p 0 0 1
chr2:240578082|240578247 hsa-miR-650 0 0 1
chr2:240578082|240578247 hsa-miR-454-5p 0 0 1
chr2:240578082|240578247 hsa-miR-454-3p 0 0 1
chr2:240578082|240578247 hsa-miR-147b-5p 0 0 1
chr2:240578082|240578247 hsa-miR-147b-3p 0 0 1
chr2:240578082|240578247 hsa-miR-301b-5p 0 0 1
chr2:240578082|240578247 hsa-miR-301b-3p 0 0 1
chr2:240578082|240578247 hsa-miR-939-5p 0 0 1
chr2:240578082|240578247 hsa-miR-939-3p 0 0 1
chr2:240578082|240578247 hsa-miR-491-5p 0 0 1
chr2:240578082|240578247 hsa-miR-1207-5p 0 0 1
chr2:240578082|240578247 hsa-miR-564 1 0 0
chr2:240578082|240578247 hsa-miR-608 1 0 0
chr2:240578082|240578247 hsa-miR-637 1 0 0
chr2:240578082|240578247 hsa-miR-762 1 1 0
chr2:240578082|240578247 hsa-miR-665 1 0 0
chr2:240578082|240578247 hsa-miR-2861 0 1 0
chr2:240578082|240578247 hsa-miR-3122 0 1 0
chr2:240578082|240578247 hsa-miR-3141 1 0 0
chr2:240578082|240578247 hsa-miR-3196 0 1 0
chr2:240578082|240578247 hsa-miR-4298 1 0 0
chr2:240578082|240578247 hsa-miR-3612 0 1 0
chr2:240578082|240578247 hsa-miR-3621 1 0 0
chr2:240578082|240578247 hsa-miR-3665 0 1 0
chr2:240578082|240578247 hsa-miR-3666 1 1 0
chr2:240578082|240578247 hsa-miR-3918 0 1 0
chr2:240578082|240578247 hsa-miR-4429 1 0 0
chr2:240578082|240578247 hsa-miR-4449 0 1 0
chr2:240578082|240578247 hsa-miR-4492 0 1 0
chr2:240578082|240578247 hsa-miR-4498 1 1 0
chr2:240578082|240578247 hsa-miR-4508 0 1 0
chr2:240578082|240578247 hsa-miR-4512 0 1 0
chr2:240578082|240578247 hsa-miR-4519 1 0 0
chr2:240578082|240578247 hsa-miR-1587 1 0 0
chr2:240578082|240578247 hsa-miR-4651 1 1 0
chr2:240578082|240578247 hsa-miR-4656 1 0 0
chr2:240578082|240578247 hsa-miR-4734 1 1 0
chr2:240578082|240578247 hsa-miR-4739 1 0 0
chr2:240578082|240578247 hsa-miR-4741 1 0 0
chr2:240578082|240578247 hsa-miR-4767 1 0 0
chr2:240578082|240578247 hsa-miR-6069 0 1 0
chr2:240578082|240578247 hsa-miR-6133 1 0 0
chr2:240578082|240578247 hsa-miR-6165 1 0 0
chr2:240578082|240578247 hsa-miR-6860 0 1 0
chr2:240578082|240578247 hsa-miR-8073 0 1 0
chr2:240578082|240578247 hsa-miR-17-3p 0 1 0
chr2:240578082|240578247 hsa-miR-504-3p 1 0 0
chr2:240578082|240578247 hsa-miR-4433a-3p 1 0 0
chr2:240578082|240578247 hsa-miR-6089 1 0 0
chr2:240578082|240578247 hsa-miR-6757-5p 1 0 0
chr2:240578082|240578247 hsa-miR-7847-3p 1 0 0
chr2:240578082|240578247 hsa-miR-4695-5p 1 1 0
chr2:240578082|240578247 hsa-miR-4722-5p 1 0 0
chr2:240578082|240578247 hsa-miR-874-5p 0 1 0
chr2:240578082|240578247 hsa-miR-6762-3p 0 1 0
chr2:240578082|240578247 hsa-miR-6727-5p 0 1 0
chr2:240578082|240578247 hsa-miR-6806-5p 1 0 0
chr2:240578082|240578247 hsa-miR-7845-5p 1 0 0
chr2:240578082|240578247 hsa-miR-1915-5p 0 1 0
chr2:240578082|240578247 hsa-miR-3180-3p 0 1 0
chr2:240578082|240578247 hsa-miR-6829-5p 0 1 0
chr2:240578082|240578247 hsa-miR-6798-5p 1 0 0
chr2:240578082|240578247 hsa-miR-486-3p 1 0 0
chr2:240578082|240578247 hsa-miR-6782-5p 1 0 0
chr2:240578082|240578247 hsa-miR-4793-3p 1 0 0
chr2:240578082|240578247 hsa-miR-6765-3p 0 1 0
chr2:240578082|240578247 hsa-miR-6810-5p 1 0 0
chr2:240578082|240578247 hsa-miR-1908-3p 1 0 0
chr2:240578082|240578247 hsa-miR-6784-5p 0 1 0
chr2:240578082|240578247 hsa-miR-4640-5p 1 0 0
chr2:240578082|240578247 hsa-miR-6771-5p 1 0 0
chr2:240578082|240578247 hsa-miR-4732-5p 1 0 0
chr2:240578082|240578247 hsa-miR-6749-5p 1 0 0
chr2:240578082|240578247 hsa-miR-4446-3p 1 1 0
chr2:240578082|240578247 hsa-miR-937-5p 1 0 0
chr2:240578082|240578247 hsa-miR-3925-5p 1 0 0
chr2:240578082|240578247 hsa-miR-6720-3p 0 1 0
chr2:240578082|240578247 hsa-miR-331-5p 1 0 0
chr2:240578082|240578247 hsa-miR-4746-3p 1 0 0
chr2:240578082|240578247 hsa-miR-4524a-3p 0 1 0
chr2:240578082|240578247 hsa-miR-4524b-3p 0 1 0
chr2:240578082|240578247 hsa-miR-10400-5p 1 0 0
chr2:240578082|240578247 hsa-miR-4763-3p 1 0 0
chr2:240578082|240578247 hsa-miR-6816-5p 0 1 0
chr2:240578082|240578247 hsa-miR-6775-5p 1 0 0
chr2:240578082|240578247 hsa-miR-5001-5p 1 1 0
chr2:240578082|240578247 hsa-miR-6726-5p 1 0 0
chr2:240578082|240578247 hsa-miR-6743-5p 1 0 0
chr2:240578082|240578247 hsa-miR-6752-5p 0 1 0
chr2:240578082|240578247 hsa-miR-6803-5p 0 1 0
chr2:240578082|240578247 hsa-miR-6851-5p 1 0 0
chr2:240578082|240578247 hsa-miR-6879-5p 1 0 0
chr2:240578082|240578247 hsa-miR-3620-5p 1 0 0
chr2:240578082|240578247 hsa-miR-4685-5p 1 1 0
chr2:240578082|240578247 hsa-miR-4745-5p 1 1 0
chr2:240578082|240578247 hsa-miR-6831-5p 1 0 0
chr2:240578082|240578247 hsa-miR-1266-5p 0 1 0
chr2:240578082|240578247 hsa-miR-6511a-5p 1 0 0
chr2:240578082|240578247 hsa-miR-10396a-3p 0 1 0
chr2:240578082|240578247 hsa-miR-10396b-3p 0 1 0
chr2:240578082|240578247 hsa-miR-6856-5p 1 0 0
chr2:240578082|240578247 hsa-miR-9851-5p 1 1 0
chr2:240578082|240578247 hsa-miR-320a-3p 1 0 0
chr2:240578082|240578247 hsa-miR-320b 1 0 0
chr2:240578082|240578247 hsa-miR-6837-5p 0 1 0
chr2:240578082|240578247 hsa-miR-3619-5p 1 0 0
chr2:240578082|240578247 hsa-miR-6764-5p 0 1 0
chr2:240578082|240578247 hsa-miR-5588-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr2:240578082|240578247
ORF Type ORF1
Protein Length 55
Nucleotide Length 165
Protein Sequence LASPLPALLHCRPWGQPAHTMPPVSTLTAVPSPGCQHLPGAAPGQGPQQPYGDRH
Nucleotide Sequence CTGGCCTCCCCACTCCCAGCTCTCTTGCACTGCAGGCCCTGGGGCCAGCCCGCACACACCATGCCTCCTGTCTCAACACTGACAGCTGTGCCTAGCCCCGGATGCCAGCACCTGCCAGGTGCCGCCCCGGGGCAAGGGCCCCAGCAGCCCTATGGTGACCGCCAC
CircID chr2:240578082|240578247
ORF Type ORF2
Protein Length 27
Nucleotide Length 81
Protein Sequence MCLAPDASTCQVPPRGKGPSSPMVTAT
Nucleotide Sequence CTGTGCCTAGCCCCGGATGCCAGCACCTGCCAGGTGCCGCCCCGGGGCAAGGGCCCCAGCAGCCCTATGGTGACCGCCACA
CircID chr2:240578082|240578247
ORF Type ORF3
Protein Length 28
Nucleotide Length 84
Protein Sequence MSVLRQEAWCVRAGPRACSARELGVGRP
Nucleotide Sequence CTGTCAGTGTTGAGACAGGAGGCATGGTGTGTGCGGGCTGGCCCCAGGGCCTGCAGTGCAAGAGAGCTGGGAGTGGGGAGGCCA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab