CircRNA Information

General Information
circRNA Basic Information
CircID chr2:240965492|240965665
Strand +
CircType exon
Host Gene ENSG00000226321.5;
Algorism CIRI2;
Sequence CTCTGCCAACTTCCTCTGCAATCCCAGGACCTGTAGGAGGGATGTTGGGGTGCGCCCGTGGGAGACAGTGAGGAAGTGGGGTGGGCCTCCTCCCTCTGCTCCCCGACGCCCAGCTCCTTCCCTTCTGACCACAGGCAGCCCTCCCACCTCCTTCCGGGCACCCTCGTGCTTGGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr2:240965492|240965665 hsa-miR-150-5p 0 0 1
chr2:240965492|240965665 hsa-miR-150-3p 0 0 1
chr2:240965492|240965665 hsa-miR-552-5p 0 0 1
chr2:240965492|240965665 hsa-miR-552-3p 0 0 1
chr2:240965492|240965665 hsa-miR-585-5p 0 0 1
chr2:240965492|240965665 hsa-miR-585-3p 0 0 1
chr2:240965492|240965665 hsa-miR-662 0 0 1
chr2:240965492|240965665 hsa-miR-765 0 0 1
chr2:240965492|240965665 hsa-miR-708-5p 0 0 1
chr2:240965492|240965665 hsa-miR-708-3p 0 0 1
chr2:240965492|240965665 hsa-miR-939-5p 0 0 1
chr2:240965492|240965665 hsa-miR-939-3p 0 0 1
chr2:240965492|240965665 hsa-miR-1208 0 0 1
chr2:240965492|240965665 hsa-miR-1321 0 0 1
chr2:240965492|240965665 hsa-miR-532-3p 0 0 1
chr2:240965492|240965665 hsa-miR-542-5p 0 0 1
chr2:240965492|240965665 hsa-miR-28-5p 0 0 1
chr2:240965492|240965665 hsa-miR-1268 0 0 1
chr2:240965492|240965665 hsa-miR-658 0 1 0
chr2:240965492|240965665 hsa-miR-762 1 0 0
chr2:240965492|240965665 hsa-miR-3125 0 1 0
chr2:240965492|240965665 hsa-miR-3138 1 0 0
chr2:240965492|240965665 hsa-miR-3147 1 0 0
chr2:240965492|240965665 hsa-miR-3154 1 1 0
chr2:240965492|240965665 hsa-miR-4326 0 1 0
chr2:240965492|240965665 hsa-miR-3916 0 1 0
chr2:240965492|240965665 hsa-miR-4421 1 0 0
chr2:240965492|240965665 hsa-miR-4468 0 1 0
chr2:240965492|240965665 hsa-miR-4487 0 1 0
chr2:240965492|240965665 hsa-miR-4510 0 1 0
chr2:240965492|240965665 hsa-miR-4533 1 1 0
chr2:240965492|240965665 hsa-miR-4656 1 0 0
chr2:240965492|240965665 hsa-miR-4669 1 1 0
chr2:240965492|240965665 hsa-miR-4706 1 0 0
chr2:240965492|240965665 hsa-miR-4721 0 1 0
chr2:240965492|240965665 hsa-miR-4739 1 1 0
chr2:240965492|240965665 hsa-miR-4741 1 0 0
chr2:240965492|240965665 hsa-miR-5572 1 0 0
chr2:240965492|240965665 hsa-miR-5787 1 1 0
chr2:240965492|240965665 hsa-miR-6081 0 1 0
chr2:240965492|240965665 hsa-miR-6090 1 0 0
chr2:240965492|240965665 hsa-miR-6125 1 1 0
chr2:240965492|240965665 hsa-miR-6127 1 1 0
chr2:240965492|240965665 hsa-miR-6129 1 1 0
chr2:240965492|240965665 hsa-miR-6133 0 1 0
chr2:240965492|240965665 hsa-miR-6134 0 1 0
chr2:240965492|240965665 hsa-miR-7515 0 1 0
chr2:240965492|240965665 hsa-miR-9900 0 1 0
chr2:240965492|240965665 hsa-miR-12118 0 1 0
chr2:240965492|240965665 hsa-miR-7106-5p 0 1 0
chr2:240965492|240965665 hsa-miR-6799-5p 1 1 0
chr2:240965492|240965665 hsa-miR-6804-5p 0 1 0
chr2:240965492|240965665 hsa-miR-6746-5p 1 0 0
chr2:240965492|240965665 hsa-miR-6727-5p 1 0 0
chr2:240965492|240965665 hsa-miR-3180-3p 1 0 0
chr2:240965492|240965665 hsa-miR-6772-5p 1 0 0
chr2:240965492|240965665 hsa-miR-6829-5p 1 1 0
chr2:240965492|240965665 hsa-miR-6732-5p 1 1 0
chr2:240965492|240965665 hsa-miR-2467-3p 0 1 0
chr2:240965492|240965665 hsa-miR-4713-5p 0 1 0
chr2:240965492|240965665 hsa-miR-6786-5p 1 0 0
chr2:240965492|240965665 hsa-miR-6852-5p 0 1 0
chr2:240965492|240965665 hsa-miR-6740-5p 1 0 0
chr2:240965492|240965665 hsa-miR-6847-5p 0 1 0
chr2:240965492|240965665 hsa-miR-4787-5p 1 0 0
chr2:240965492|240965665 hsa-miR-4667-3p 0 1 0
chr2:240965492|240965665 hsa-miR-4446-3p 0 1 0
chr2:240965492|240965665 hsa-miR-149-3p 1 1 0
chr2:240965492|240965665 hsa-miR-1304-3p 0 1 0
chr2:240965492|240965665 hsa-miR-6824-5p 1 0 0
chr2:240965492|240965665 hsa-miR-1238-3p 0 1 0
chr2:240965492|240965665 hsa-miR-6793-3p 0 1 0
chr2:240965492|240965665 hsa-miR-670-3p 0 1 0
chr2:240965492|240965665 hsa-miR-6801-5p 0 1 0
chr2:240965492|240965665 hsa-miR-6760-3p 0 1 0
chr2:240965492|240965665 hsa-miR-6722-5p 0 1 0
chr2:240965492|240965665 hsa-miR-1207-5p 1 0 0
chr2:240965492|240965665 hsa-miR-4763-3p 1 0 0
chr2:240965492|240965665 hsa-miR-6778-5p 0 1 0
chr2:240965492|240965665 hsa-miR-1343-5p 1 0 0
chr2:240965492|240965665 hsa-miR-6726-5p 1 0 0
chr2:240965492|240965665 hsa-miR-6743-5p 1 0 0
chr2:240965492|240965665 hsa-miR-6752-5p 1 0 0
chr2:240965492|240965665 hsa-miR-6756-5p 1 0 0
chr2:240965492|240965665 hsa-miR-6803-5p 1 0 0
chr2:240965492|240965665 hsa-miR-6819-5p 1 0 0
chr2:240965492|240965665 hsa-miR-1249-5p 1 1 0
chr2:240965492|240965665 hsa-miR-6751-5p 1 0 0
chr2:240965492|240965665 hsa-miR-6763-5p 1 0 0
chr2:240965492|240965665 hsa-miR-6779-5p 1 1 0
chr2:240965492|240965665 hsa-miR-6780a-5p 0 1 0
chr2:240965492|240965665 hsa-miR-6797-5p 1 1 0
chr2:240965492|240965665 hsa-miR-5196-5p 1 1 0
chr2:240965492|240965665 hsa-miR-6780b-5p 0 1 0
chr2:240965492|240965665 hsa-miR-10396b-5p 1 0 0
chr2:240965492|240965665 hsa-miR-1909-3p 0 1 0
chr2:240965492|240965665 hsa-miR-328-5p 1 1 0
chr2:240965492|240965665 hsa-miR-4632-5p 1 0 0
chr2:240965492|240965665 hsa-miR-4725-3p 1 0 0
chr2:240965492|240965665 hsa-miR-6777-5p 1 1 0
chr2:240965492|240965665 hsa-miR-6846-5p 1 1 0
chr2:240965492|240965665 hsa-miR-6848-5p 1 0 0
chr2:240965492|240965665 hsa-miR-6883-5p 1 1 0
chr2:240965492|240965665 hsa-miR-6889-5p 1 1 0
chr2:240965492|240965665 hsa-miR-4747-5p 0 1 0
chr2:240965492|240965665 hsa-miR-6891-5p 0 1 0
chr2:240965492|240965665 hsa-miR-6785-5p 1 1 0
chr2:240965492|240965665 hsa-miR-4667-5p 1 0 0
chr2:240965492|240965665 hsa-miR-4756-5p 0 1 0
chr2:240965492|240965665 hsa-miR-10394-5p 0 1 0
chr2:240965492|240965665 hsa-miR-619-5p 0 1 0
chr2:240965492|240965665 hsa-miR-4676-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr2:240965492|240965665
ORF Type ORF1
Protein Length 46
Nucleotide Length 138
Protein Sequence MPVVRREGAGRRGAEGGGPPHFLTVSHGRTPTSLLQVLGLQRKLAE
Nucleotide Sequence CTGCCTGTGGTCAGAAGGGAAGGAGCTGGGCGTCGGGGAGCAGAGGGAGGAGGCCCACCCCACTTCCTCACTGTCTCCCACGGGCGCACCCCAACATCCCTCCTACAGGTCCTGGGATTGCAGAGGAAGTTGGCAGAG
CircID chr2:240965492|240965665
ORF Type ORF2
Protein Length 44
Nucleotide Length 132
Protein Sequence MWSEGKELGVGEQREEAHPTSSLSPTGAPQHPSYRSWDCRGSWQ
Nucleotide Sequence CTGTGGTCAGAAGGGAAGGAGCTGGGCGTCGGGGAGCAGAGGGAGGAGGCCCACCCCACTTCCTCACTGTCTCCCACGGGCGCACCCCAACATCCCTCCTACAGGTCCTGGGATTGCAGAGGAAGTTGGCAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab