CircRNA Information

General Information
circRNA Basic Information
CircID chr2:241182668|241182816
Strand +
CircType exon
Host Gene ENSG00000115685.13;
Algorism CIRI2;
Sequence CTGACGAACGTGGCATCGATCTGCCGCACGGAGGGGAGGGCGAGCATGACCTTCCGCCGGTACTGGGGGTCCTTCTGCAAGGGGTTCCGCTCCAGGTACACTGTCTCCAGGCTCCTGGCTCCCTTCAGCTCGTCGAGGTCGCTCCAGCT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr2:241182668|241182816 hsa-miR-493-5p 0 0 1
chr2:241182668|241182816 hsa-miR-493-3p 0 0 1
chr2:241182668|241182816 hsa-miR-619-5p 0 0 1
chr2:241182668|241182816 hsa-miR-619-3p 0 0 1
chr2:241182668|241182816 hsa-miR-298 1 0 1
chr2:241182668|241182816 hsa-miR-665 1 1 1
chr2:241182668|241182816 hsa-miR-1249-5p 0 0 1
chr2:241182668|241182816 hsa-miR-1249-3p 0 0 1
chr2:241182668|241182816 hsa-miR-770-5p 0 1 1
chr2:241182668|241182816 hsa-miR-361-3p 0 0 1
chr2:241182668|241182816 hsa-miR-1254 0 0 1
chr2:241182668|241182816 hsa-miR-623 1 0 0
chr2:241182668|241182816 hsa-miR-1470 0 1 0
chr2:241182668|241182816 hsa-miR-1825 1 0 0
chr2:241182668|241182816 hsa-miR-2861 1 0 0
chr2:241182668|241182816 hsa-miR-4321 1 0 0
chr2:241182668|241182816 hsa-miR-4254 0 1 0
chr2:241182668|241182816 hsa-miR-4290 0 1 0
chr2:241182668|241182816 hsa-miR-3135b 1 1 0
chr2:241182668|241182816 hsa-miR-4479 1 0 0
chr2:241182668|241182816 hsa-miR-4634 1 0 0
chr2:241182668|241182816 hsa-miR-4656 1 1 0
chr2:241182668|241182816 hsa-miR-4730 1 0 0
chr2:241182668|241182816 hsa-miR-4739 1 0 0
chr2:241182668|241182816 hsa-miR-6090 1 0 0
chr2:241182668|241182816 hsa-miR-8089 1 1 0
chr2:241182668|241182816 hsa-miR-12121 0 1 0
chr2:241182668|241182816 hsa-miR-4731-5p 1 0 0
chr2:241182668|241182816 hsa-miR-4433a-3p 1 0 0
chr2:241182668|241182816 hsa-miR-6765-5p 1 0 0
chr2:241182668|241182816 hsa-miR-3150a-3p 1 0 0
chr2:241182668|241182816 hsa-miR-1236-5p 1 0 0
chr2:241182668|241182816 hsa-miR-1225-3p 1 0 0
chr2:241182668|241182816 hsa-miR-6807-5p 1 1 0
chr2:241182668|241182816 hsa-miR-4695-5p 1 0 0
chr2:241182668|241182816 hsa-miR-4722-5p 1 0 0
chr2:241182668|241182816 hsa-miR-505-5p 0 1 0
chr2:241182668|241182816 hsa-miR-6841-3p 0 1 0
chr2:241182668|241182816 hsa-miR-6726-3p 0 1 0
chr2:241182668|241182816 hsa-miR-3180-3p 1 0 0
chr2:241182668|241182816 hsa-miR-6827-5p 1 1 0
chr2:241182668|241182816 hsa-miR-6514-5p 1 0 0
chr2:241182668|241182816 hsa-miR-1909-5p 1 0 0
chr2:241182668|241182816 hsa-miR-6749-5p 1 0 0
chr2:241182668|241182816 hsa-miR-1184 1 0 0
chr2:241182668|241182816 hsa-miR-6864-5p 0 1 0
chr2:241182668|241182816 hsa-miR-490-3p 1 0 0
chr2:241182668|241182816 hsa-miR-6886-3p 0 1 0
chr2:241182668|241182816 hsa-miR-6859-3p 1 1 0
chr2:241182668|241182816 hsa-miR-188-5p 1 0 0
chr2:241182668|241182816 hsa-miR-6790-3p 0 1 0
chr2:241182668|241182816 hsa-miR-4763-3p 1 0 0
chr2:241182668|241182816 hsa-miR-6816-5p 1 0 0
chr2:241182668|241182816 hsa-miR-5001-5p 1 0 0
chr2:241182668|241182816 hsa-miR-6726-5p 1 1 0
chr2:241182668|241182816 hsa-miR-7107-5p 1 0 0
chr2:241182668|241182816 hsa-miR-6797-5p 1 0 0
chr2:241182668|241182816 hsa-miR-6875-5p 1 0 0
chr2:241182668|241182816 hsa-miR-328-5p 1 0 0
chr2:241182668|241182816 hsa-miR-449c-5p 0 1 0
chr2:241182668|241182816 hsa-miR-4726-5p 1 1 0
chr2:241182668|241182816 hsa-miR-675-5p 1 0 0
chr2:241182668|241182816 hsa-miR-6795-5p 1 0 0
chr2:241182668|241182816 hsa-miR-6848-5p 1 0 0
chr2:241182668|241182816 hsa-miR-939-5p 1 1 0
chr2:241182668|241182816 hsa-miR-3116 0 1 0
chr2:241182668|241182816 hsa-miR-3184-5p 1 0 0
chr2:241182668|241182816 hsa-miR-6791-5p 1 0 0
chr2:241182668|241182816 hsa-miR-6762-5p 1 0 0
chr2:241182668|241182816 hsa-miR-4676-5p 1 0 0
chr2:241182668|241182816 hsa-miR-4670-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr2:241182668|241182816
ORF Type ORF1
Protein Length 49
Nucleotide Length 147
Protein Sequence LTNVASICRTEGRASMTFRRYWGSFCKGFRSRYTVSRLLAPFSSSRSLQ
Nucleotide Sequence CTGACGAACGTGGCATCGATCTGCCGCACGGAGGGGAGGGCGAGCATGACCTTCCGCCGGTACTGGGGGTCCTTCTGCAAGGGGTTCCGCTCCAGGTACACTGTCTCCAGGCTCCTGGCTCCCTTCAGCTCGTCGAGGTCGCTCCAG

CircID chr2:241182668|241182816
ORF Type ORF2
Protein Length 43
Nucleotide Length 129
Protein Sequence MPHGGEGEHDLPPVLGVLLQGVPLQVHCLQAPGSLQLVEVAPA
Nucleotide Sequence CTGCCGCACGGAGGGGAGGGCGAGCATGACCTTCCGCCGGTACTGGGGGTCCTTCTGCAAGGGGTTCCGCTCCAGGTACACTGTCTCCAGGCTCCTGGCTCCCTTCAGCTCGTCGAGGTCGCTCCAGCT

CircID chr2:241182668|241182816
ORF Type ORF3
Protein Length 42
Nucleotide Length 126
Protein Sequence MKGARSLETVYLERNPLQKDPQYRRKVMLALPSVRQIDATFV
Nucleotide Sequence CTGAAGGGAGCCAGGAGCCTGGAGACAGTGTACCTGGAGCGGAACCCCTTGCAGAAGGACCCCCAGTACCGGCGGAAGGTCATGCTCGCCCTCCCCTCCGTGCGGCAGATCGATGCCACGTTCGTC

CircID chr2:241182668|241182816
ORF Type ORF4
Protein Length 49
Nucleotide Length 147
Protein Sequence LERPRRAEGSQEPGDSVPGAEPLAEGPPVPAEGHARPPLRAADRCHVRQ
Nucleotide Sequence CTGGAGCGACCTCGACGAGCTGAAGGGAGCCAGGAGCCTGGAGACAGTGTACCTGGAGCGGAACCCCTTGCAGAAGGACCCCCAGTACCGGCGGAAGGTCATGCTCGCCCTCCCCTCCGTGCGGCAGATCGATGCCACGTTCGTCAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites