CircRNA Information

General Information
circRNA Basic Information
CircID chr2:241229640|241229937
Strand -
CircType exon
Host Gene ENSG00000115677.15;
Algorism CIRI2;
Sequence CTGAGCCCCAAAGCTGGGAAATTCCTCAGAGCTGCTCATGTCAGGAGCCTGTGCAGAGAGAGGACACGGCTTCAGGAGGGGATGCTCCCCAACTCGCAAGCAGCTTCCGACGCAGTTGCCACCCTCAGGACACCAAGCCCGCCTGCCCGCCCACCCTCCCTGGGACCCAGGAGGGCAGAAGCCCGCATCTGACCTTCTCACTGCTGCTGGCGGTCCAGGGTGCGTCCCGCACCACAAAGCCTCTGGAAGGTGCCTTGGCCTCTTCGTGTGCTGGGGGTTTCATGTATACCTGCAGCGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr2:241229640|241229937 hsa-miR-15a-5p 0 0 1
chr2:241229640|241229937 hsa-miR-15a-3p 0 0 1
chr2:241229640|241229937 hsa-miR-15b-5p 0 0 1
chr2:241229640|241229937 hsa-miR-15b-3p 0 0 1
chr2:241229640|241229937 hsa-miR-195-5p 0 0 1
chr2:241229640|241229937 hsa-miR-195-3p 0 0 1
chr2:241229640|241229937 hsa-miR-424-5p 0 0 1
chr2:241229640|241229937 hsa-miR-424-3p 0 0 1
chr2:241229640|241229937 hsa-miR-484 0 0 1
chr2:241229640|241229937 hsa-miR-493-5p 0 0 1
chr2:241229640|241229937 hsa-miR-493-3p 0 0 1
chr2:241229640|241229937 hsa-miR-497-5p 0 0 1
chr2:241229640|241229937 hsa-miR-497-3p 0 0 1
chr2:241229640|241229937 hsa-miR-506-5p 0 0 1
chr2:241229640|241229937 hsa-miR-506-3p 0 0 1
chr2:241229640|241229937 hsa-miR-571 0 0 1
chr2:241229640|241229937 hsa-miR-646 0 0 1
chr2:241229640|241229937 hsa-miR-657 0 0 1
chr2:241229640|241229937 hsa-miR-675-5p 0 0 1
chr2:241229640|241229937 hsa-miR-675-3p 0 0 1
chr2:241229640|241229937 hsa-miR-541-5p 0 0 1
chr2:241229640|241229937 hsa-miR-541-3p 0 0 1
chr2:241229640|241229937 hsa-miR-939-5p 0 0 1
chr2:241229640|241229937 hsa-miR-939-3p 0 0 1
chr2:241229640|241229937 hsa-miR-1200 0 0 1
chr2:241229640|241229937 hsa-miR-1205 0 0 1
chr2:241229640|241229937 hsa-miR-1253 0 0 1
chr2:241229640|241229937 hsa-miR-1321 0 0 1
chr2:241229640|241229937 hsa-miR-324-5p 0 0 1
chr2:241229640|241229937 hsa-miR-654-5p 0 0 1
chr2:241229640|241229937 hsa-miR-525-5p 1 0 1
chr2:241229640|241229937 hsa-miR-361-3p 0 0 1
chr2:241229640|241229937 hsa-miR-324-3p 0 0 1
chr2:241229640|241229937 hsa-miR-520a-5p 0 0 1
chr2:241229640|241229937 hsa-miR-16 0 0 1
chr2:241229640|241229937 hsa-miR-124 0 0 1
chr2:241229640|241229937 hsa-miR-1300 0 0 1
chr2:241229640|241229937 hsa-miR-24 0 0 1
chr2:241229640|241229937 hsa-miR-608 1 0 0
chr2:241229640|241229937 hsa-miR-612 1 0 0
chr2:241229640|241229937 hsa-miR-637 1 0 0
chr2:241229640|241229937 hsa-miR-638 1 0 0
chr2:241229640|241229937 hsa-miR-663a 1 0 0
chr2:241229640|241229937 hsa-miR-665 1 0 0
chr2:241229640|241229937 hsa-miR-1202 1 0 0
chr2:241229640|241229937 hsa-miR-1268a 1 0 0
chr2:241229640|241229937 hsa-miR-3141 1 0 0
chr2:241229640|241229937 hsa-miR-3147 1 0 0
chr2:241229640|241229937 hsa-miR-3188 1 0 0
chr2:241229640|241229937 hsa-miR-4322 1 0 0
chr2:241229640|241229937 hsa-miR-4270 1 0 0
chr2:241229640|241229937 hsa-miR-4281 1 0 0
chr2:241229640|241229937 hsa-miR-3937 1 0 0
chr2:241229640|241229937 hsa-miR-1268b 1 0 0
chr2:241229640|241229937 hsa-miR-4449 1 0 0
chr2:241229640|241229937 hsa-miR-4488 1 0 0
chr2:241229640|241229937 hsa-miR-4498 1 0 0
chr2:241229640|241229937 hsa-miR-4651 1 0 0
chr2:241229640|241229937 hsa-miR-4669 1 0 0
chr2:241229640|241229937 hsa-miR-4689 1 0 0
chr2:241229640|241229937 hsa-miR-4706 1 0 0
chr2:241229640|241229937 hsa-miR-4739 1 0 0
chr2:241229640|241229937 hsa-miR-4767 1 0 0
chr2:241229640|241229937 hsa-miR-6085 1 0 0
chr2:241229640|241229937 hsa-miR-6086 1 0 0
chr2:241229640|241229937 hsa-miR-6860 1 0 0
chr2:241229640|241229937 hsa-miR-7974 1 0 0
chr2:241229640|241229937 hsa-miR-12119 1 0 0
chr2:241229640|241229937 hsa-miR-187-3p 1 0 0
chr2:241229640|241229937 hsa-miR-4747-3p 1 0 0
chr2:241229640|241229937 hsa-miR-6765-5p 1 0 0
chr2:241229640|241229937 hsa-miR-27a-5p 1 0 0
chr2:241229640|241229937 hsa-miR-6799-5p 1 0 0
chr2:241229640|241229937 hsa-miR-8071 1 0 0
chr2:241229640|241229937 hsa-miR-6804-5p 1 0 0
chr2:241229640|241229937 hsa-miR-6089 1 0 0
chr2:241229640|241229937 hsa-miR-4722-5p 1 0 0
chr2:241229640|241229937 hsa-miR-1301-3p 1 0 0
chr2:241229640|241229937 hsa-miR-593-5p 1 0 0
chr2:241229640|241229937 hsa-miR-6759-5p 1 0 0
chr2:241229640|241229937 hsa-miR-6721-5p 1 0 0
chr2:241229640|241229937 hsa-miR-3605-5p 1 0 0
chr2:241229640|241229937 hsa-miR-6748-5p 1 0 0
chr2:241229640|241229937 hsa-miR-6793-5p 1 0 0
chr2:241229640|241229937 hsa-miR-4697-3p 1 0 0
chr2:241229640|241229937 hsa-miR-6732-5p 1 0 0
chr2:241229640|241229937 hsa-miR-23a-5p 1 0 0
chr2:241229640|241229937 hsa-miR-6798-5p 1 0 0
chr2:241229640|241229937 hsa-miR-6782-5p 1 0 0
chr2:241229640|241229937 hsa-miR-1226-5p 1 0 0
chr2:241229640|241229937 hsa-miR-1908-3p 1 0 0
chr2:241229640|241229937 hsa-miR-6784-5p 1 0 0
chr2:241229640|241229937 hsa-miR-1908-5p 1 0 0
chr2:241229640|241229937 hsa-miR-1228-5p 1 0 0
chr2:241229640|241229937 hsa-miR-6771-5p 1 0 0
chr2:241229640|241229937 hsa-miR-4690-5p 1 0 0
chr2:241229640|241229937 hsa-miR-6749-5p 1 0 0
chr2:241229640|241229937 hsa-miR-4787-5p 1 0 0
chr2:241229640|241229937 hsa-miR-149-3p 1 0 0
chr2:241229640|241229937 hsa-miR-3162-5p 1 0 0
chr2:241229640|241229937 hsa-miR-7112-5p 1 0 0
chr2:241229640|241229937 hsa-miR-526b-5p 1 0 0
chr2:241229640|241229937 hsa-miR-3180-5p 1 0 0
chr2:241229640|241229937 hsa-miR-4750-5p 1 0 0
chr2:241229640|241229937 hsa-miR-4649-3p 1 0 0
chr2:241229640|241229937 hsa-miR-1207-5p 1 0 0
chr2:241229640|241229937 hsa-miR-1233-5p 1 0 0
chr2:241229640|241229937 hsa-miR-4763-3p 1 0 0
chr2:241229640|241229937 hsa-miR-6769b-5p 1 0 0
chr2:241229640|241229937 hsa-miR-6778-5p 1 0 0
chr2:241229640|241229937 hsa-miR-6787-5p 1 0 0
chr2:241229640|241229937 hsa-miR-6816-5p 1 0 0
chr2:241229640|241229937 hsa-miR-6743-5p 1 0 0
chr2:241229640|241229937 hsa-miR-6752-5p 1 0 0
chr2:241229640|241229937 hsa-miR-6756-5p 1 0 0
chr2:241229640|241229937 hsa-miR-6803-5p 1 0 0
chr2:241229640|241229937 hsa-miR-6819-5p 1 0 0
chr2:241229640|241229937 hsa-miR-6842-5p 1 0 0
chr2:241229640|241229937 hsa-miR-7110-5p 1 0 0
chr2:241229640|241229937 hsa-miR-10401-5p 1 0 0
chr2:241229640|241229937 hsa-miR-6722-3p 1 0 0
chr2:241229640|241229937 hsa-miR-6751-5p 1 0 0
chr2:241229640|241229937 hsa-miR-6779-5p 1 0 0
chr2:241229640|241229937 hsa-miR-6879-5p 1 0 0
chr2:241229640|241229937 hsa-miR-1915-3p 1 0 0
chr2:241229640|241229937 hsa-miR-3620-5p 1 0 0
chr2:241229640|241229937 hsa-miR-4728-5p 1 0 0
chr2:241229640|241229937 hsa-miR-10396b-5p 1 0 0
chr2:241229640|241229937 hsa-miR-1237-5p 1 0 0
chr2:241229640|241229937 hsa-miR-1909-3p 1 0 0
chr2:241229640|241229937 hsa-miR-328-5p 1 0 0
chr2:241229640|241229937 hsa-miR-4685-5p 1 0 0
chr2:241229640|241229937 hsa-miR-6848-5p 1 0 0
chr2:241229640|241229937 hsa-miR-6858-5p 1 0 0
chr2:241229640|241229937 hsa-miR-6883-5p 1 0 0
chr2:241229640|241229937 hsa-miR-3187-5p 1 0 0
chr2:241229640|241229937 hsa-miR-6885-5p 1 0 0
chr2:241229640|241229937 hsa-miR-10394-3p 1 0 0
chr2:241229640|241229937 hsa-miR-3198 1 0 0
chr2:241229640|241229937 hsa-miR-3940-5p 1 0 0
chr2:241229640|241229937 hsa-miR-6758-5p 1 0 0
chr2:241229640|241229937 hsa-miR-6785-5p 1 0 0
chr2:241229640|241229937 hsa-miR-6791-5p 1 0 0
chr2:241229640|241229937 hsa-miR-6762-5p 1 0 0
chr2:241229640|241229937 hsa-miR-10400-3p 1 0 0
chr2:241229640|241229937 hsa-miR-6838-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr2:241229640|241229937
ORF Type ORF1
Protein Length 63
Nucleotide Length 192
Protein Sequence LSPKAGKFLRAAHVRSLCRERTRLQEGMLPNSQAASDAVATLRTPSPPARPPSLGPRRAEARI
Nucleotide Sequence CTGAGCCCCAAAGCTGGGAAATTCCTCAGAGCTGCTCATGTCAGGAGCCTGTGCAGAGAGAGGACACGGCTTCAGGAGGGGATGCTCCCCAACTCGCAAGCAGCTTCCGACGCAGTTGCCACCCTCAGGACACCAAGCCCGCCTGCCCGCCCACCCTCCCTGGGACCCAGGAGGGCAGAAGCCCGCATCTGA

CircID chr2:241229640|241229937
ORF Type ORF2
Protein Length 95
Nucleotide Length 285
Protein Sequence MGNSSELLMSGACAERGHGFRRGCSPTRKQLPTQLPPSGHQARLPAHPPWDPGGQKPASDLLTAAGGPGCVPHHKASGRCLGLFVCWGFHVYLQR
Nucleotide Sequence CTGGGAAATTCCTCAGAGCTGCTCATGTCAGGAGCCTGTGCAGAGAGAGGACACGGCTTCAGGAGGGGATGCTCCCCAACTCGCAAGCAGCTTCCGACGCAGTTGCCACCCTCAGGACACCAAGCCCGCCTGCCCGCCCACCCTCCCTGGGACCCAGGAGGGCAGAAGCCCGCATCTGACCTTCTCACTGCTGCTGGCGGTCCAGGGTGCGTCCCGCACCACAAAGCCTCTGGAAGGTGCCTTGGCCTCTTCGTGTGCTGGGGGTTTCATGTATACCTGCAGCGC

CircID chr2:241229640|241229937
ORF Type ORF3
Protein Length 36
Nucleotide Length 108
Protein Sequence MTFSLLLAVQGASRTTKPLEGALASSCAGGFMYTCS
Nucleotide Sequence CTGACCTTCTCACTGCTGCTGGCGGTCCAGGGTGCGTCCCGCACCACAAAGCCTCTGGAAGGTGCCTTGGCCTCTTCGTGTGCTGGGGGTTTCATGTATACCTGCAGC

CircID chr2:241229640|241229937
ORF Type ORF4
Protein Length 56
Nucleotide Length 171
Protein Sequence MQVYMKPPAHEEAKAPSRGFVVRDAPWTASSSEKVRCGLLPSWVPGRVGGQAGLVS
Nucleotide Sequence CTGCAGGTATACATGAAACCCCCAGCACACGAAGAGGCCAAGGCACCTTCCAGAGGCTTTGTGGTGCGGGACGCACCCTGGACCGCCAGCAGCAGTGAGAAGGTCAGATGCGGGCTTCTGCCCTCCTGGGTCCCAGGGAGGGTGGGCGGGCAGGCGGGCTTGGTGTCCTGA

CircID chr2:241229640|241229937
ORF Type ORF5
Protein Length 79
Nucleotide Length 237
Protein Sequence MWCGTHPGPPAAVRRSDAGFCPPGSQGGWAGRRAWCPEGGNCVGSCLRVGEHPLLKPCPLSAQAPDMSSSEEFPSFGAQ
Nucleotide Sequence TTGTGGTGCGGGACGCACCCTGGACCGCCAGCAGCAGTGAGAAGGTCAGATGCGGGCTTCTGCCCTCCTGGGTCCCAGGGAGGGTGGGCGGGCAGGCGGGCTTGGTGTCCTGAGGGTGGCAACTGCGTCGGAAGCTGCTTGCGAGTTGGGGAGCATCCCCTCCTGAAGCCGTGTCCTCTCTCTGCACAGGCTCCTGACATGAGCAGCTCTGAGGAATTTCCCAGCTTTGGGGCTCAG

CircID chr2:241229640|241229937
ORF Type ORF6
Protein Length 38
Nucleotide Length 117
Protein Sequence MRASALLGPREGGRAGGLGVLRVATASEAACELGSIPS
Nucleotide Sequence ATGCGGGCTTCTGCCCTCCTGGGTCCCAGGGAGGGTGGGCGGGCAGGCGGGCTTGGTGTCCTGAGGGTGGCAACTGCGTCGGAAGCTGCTTGCGAGTTGGGGAGCATCCCCTCCTGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites