CircRNA Information

General Information
circRNA Basic Information
CircID chr2:241229879|241230233
Strand +
CircType exon
Host Gene ENSG00000115677.15;
Algorism CIRI2;
Sequence CCCAACTGCGTCACTGTGACGGGGCTCCCAGAGAATGTGGAGGAAGCCATCGACCACATCCTCAATCTGGAGGAGGAATACGTGAGTCTCTGTGGGCCTTGGAGCCCTGAGGCGCCCTGGCACGTCCACCGGCCTGAGGCCCAGCCAGGAGCTTCAGGGGACAAGGTGGCACTTGTGTTTCCAGAGGCAGGCGAGGTGCAGGGGTGAGCAGGCGGGCGGGATGCTGGGGGTGCTGGGCAGACTGACCCTGTCTTCCTGTCTTCTGCCTGCAGCTAGCTGACGTGGTGGACAGTGAGGCGCTGCAGGTATACATGAAACCCCCAGCACACGAAGAGGCCAAGGCACCTTCCAGAGG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr2:241229879|241230233 hsa-miR-18a-5p 0 0 1
chr2:241229879|241230233 hsa-miR-18a-3p 0 0 1
chr2:241229879|241230233 hsa-miR-22-5p 0 0 1
chr2:241229879|241230233 hsa-miR-22-3p 0 0 1
chr2:241229879|241230233 hsa-miR-27a-5p 0 0 1
chr2:241229879|241230233 hsa-miR-27a-3p 0 0 1
chr2:241229879|241230233 hsa-miR-27b-5p 0 0 1
chr2:241229879|241230233 hsa-miR-27b-3p 0 0 1
chr2:241229879|241230233 hsa-miR-326 -8 1 1
chr2:241229879|241230233 hsa-miR-135b-5p 0 0 1
chr2:241229879|241230233 hsa-miR-135b-3p 0 0 1
chr2:241229879|241230233 hsa-miR-346 -20 1 1
chr2:241229879|241230233 hsa-miR-18b-5p 0 0 1
chr2:241229879|241230233 hsa-miR-18b-3p 0 0 1
chr2:241229879|241230233 hsa-miR-622 -8 1 1
chr2:241229879|241230233 hsa-miR-637 -15 1 1
chr2:241229879|241230233 hsa-miR-298 -11 1 1
chr2:241229879|241230233 hsa-miR-920 -9 0 1
chr2:241229879|241230233 hsa-miR-1178-5p 0 0 1
chr2:241229879|241230233 hsa-miR-1178-3p 0 0 1
chr2:241229879|241230233 hsa-miR-1227-5p 0 0 1
chr2:241229879|241230233 hsa-miR-1227-3p 0 0 1
chr2:241229879|241230233 hsa-miR-1205 -2 0 1
chr2:241229879|241230233 hsa-miR-1208 -9 0 1
chr2:241229879|241230233 hsa-miR-1299 -9 0 1
chr2:241229879|241230233 hsa-miR-1265 -9 1 1
chr2:241229879|241230233 hsa-miR-1266-5p 0 0 1
chr2:241229879|241230233 hsa-miR-1266-3p 0 0 1
chr2:241229879|241230233 hsa-miR-127-5p -2 0 1
chr2:241229879|241230233 hsa-miR-1225-3p -7 0 1
chr2:241229879|241230233 hsa-miR-1224-5p -7 0 1
chr2:241229879|241230233 hsa-miR-324-5p -7 0 1
chr2:241229879|241230233 hsa-miR-1184 -6 1 1
chr2:241229879|241230233 hsa-miR-566 0 0 1
chr2:241229879|241230233 hsa-miR-361-3p -3 0 1
chr2:241229879|241230233 hsa-miR-875-5p -3 0 1
chr2:241229879|241230233 hsa-miR-331-3p -5 0 1
chr2:241229879|241230233 hsa-miR-767-3p -12 1 1
chr2:241229879|241230233 hsa-miR-875-3p -8 1 1
chr2:241229879|241230233 hsa-miR-338-3p -4 0 1
chr2:241229879|241230233 hsa-miR-324-3p 0 0 1
chr2:241229879|241230233 hsa-miR-330-5p -14 1 1
chr2:241229879|241230233 hsa-miR-516a-3p -2 0 1
chr2:241229879|241230233 hsa-miR-128 0 0 1
chr2:241229879|241230233 hsa-miR-7 0 0 1
chr2:241229879|241230233 hsa-miR-135a 0 0 1
chr2:241229879|241230233 hsa-miR-1185 0 0 1
chr2:241229879|241230233 hsa-miR-764 -14 1 0
chr2:241229879|241230233 hsa-miR-4421 -13 1 0
chr2:241229879|241230233 hsa-miR-4505 -9 1 0
chr2:241229879|241230233 hsa-miR-4734 -7 1 0
chr2:241229879|241230233 hsa-miR-5787 -11 1 0
chr2:241229879|241230233 hsa-miR-9899 -16 1 0
chr2:241229879|241230233 hsa-miR-9985 0 1 0
chr2:241229879|241230233 hsa-miR-12122 0 1 0
chr2:241229879|241230233 hsa-miR-128-3p -1 1 0
chr2:241229879|241230233 hsa-miR-223-3p -15 1 0
chr2:241229879|241230233 hsa-miR-4731-5p -15 1 0
chr2:241229879|241230233 hsa-miR-6747-3p -12 1 0
chr2:241229879|241230233 hsa-miR-212-5p -5 1 0
chr2:241229879|241230233 hsa-miR-3192-5p -8 1 0
chr2:241229879|241230233 hsa-miR-6842-3p -4 1 0
chr2:241229879|241230233 hsa-miR-6806-5p -13 1 0
chr2:241229879|241230233 hsa-miR-5006-5p -3 1 0
chr2:241229879|241230233 hsa-miR-5088-5p -4 1 0
chr2:241229879|241230233 hsa-miR-4763-5p -18 1 0
chr2:241229879|241230233 hsa-miR-7108-3p -12 1 0
chr2:241229879|241230233 hsa-miR-4715-3p -6 1 0
chr2:241229879|241230233 hsa-miR-6749-5p -4 1 0
chr2:241229879|241230233 hsa-miR-6878-3p -8 1 0
chr2:241229879|241230233 hsa-miR-1304-3p -11 1 0
chr2:241229879|241230233 hsa-miR-887-5p -12 1 0
chr2:241229879|241230233 hsa-miR-3922-5p -5 1 0
chr2:241229879|241230233 hsa-miR-6871-3p -11 1 0
chr2:241229879|241230233 hsa-miR-6513-3p -15 1 0
chr2:241229879|241230233 hsa-miR-668-5p -6 1 0
chr2:241229879|241230233 hsa-miR-6760-3p -4 1 0
chr2:241229879|241230233 hsa-miR-518c-5p -11 1 0
chr2:241229879|241230233 hsa-miR-4524a-3p -5 1 0
chr2:241229879|241230233 hsa-miR-6802-3p -7 1 0
chr2:241229879|241230233 hsa-miR-1229-3p 0 1 0
chr2:241229879|241230233 hsa-miR-4524b-3p -7 1 0
chr2:241229879|241230233 hsa-miR-4485-5p -6 1 0
chr2:241229879|241230233 hsa-miR-6751-5p -7 1 0
chr2:241229879|241230233 hsa-miR-6808-5p -10 1 0
chr2:241229879|241230233 hsa-miR-4685-5p -6 1 0
chr2:241229879|241230233 hsa-miR-1910-3p -7 1 0
chr2:241229879|241230233 hsa-miR-6511a-5p -8 1 0
chr2:241229879|241230233 hsa-miR-6511b-5p -11 1 0
chr2:241229879|241230233 hsa-miR-4747-5p 0 1 0
chr2:241229879|241230233 hsa-miR-302c-3p -5 1 0
chr2:241229879|241230233 hsa-miR-2682-3p -9 1 0
chr2:241229879|241230233 hsa-miR-4731-3p -5 1 0
chr2:241229879|241230233 hsa-miR-6784-3p -10 1 0
chr2:241229879|241230233 hsa-miR-6792-3p -10 1 0
chr2:241229879|241230233 hsa-miR-6862-3p -10 1 0
chr2:241229879|241230233 hsa-miR-6801-3p -8 1 0
chr2:241229879|241230233 hsa-miR-6810-3p -11 1 0
chr2:241229879|241230233 hsa-miR-3928-5p -6 1 0
chr2:241229879|241230233 hsa-miR-6837-5p -11 1 0
chr2:241229879|241230233 hsa-miR-6744-3p -12 1 0
chr2:241229879|241230233 hsa-miR-4691-5p -10 1 0
chr2:241229879|241230233 hsa-miR-3144-3p -4 1 0
chr2:241229879|241230233 hsa-miR-6504-5p -9 1 0
chr2:241229879|241230233 hsa-miR-6516-3p -7 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr2:241229879|241230233
ORF Type ORF1
Protein Length 46
Nucleotide Length 141
Protein Sequence MEEEYVSLCGPWSPEAPWHVHRPEAQPGASGDKVALVFPEAGEVQG
Nucleotide Sequence CTGGAGGAGGAATACGTGAGTCTCTGTGGGCCTTGGAGCCCTGAGGCGCCCTGGCACGTCCACCGGCCTGAGGCCCAGCCAGGAGCTTCAGGGGACAAGGTGGCACTTGTGTTTCCAGAGGCAGGCGAGGTGCAGGGGTGA
CircID chr2:241229879|241230233
ORF Type ORF2
Protein Length 57
Nucleotide Length 174
Protein Sequence MRRPGTSTGLRPSQELQGTRWHLCFQRQARCRGEQAGGMLGVLGRLTLSSCLLPAAS
Nucleotide Sequence CTGAGGCGCCCTGGCACGTCCACCGGCCTGAGGCCCAGCCAGGAGCTTCAGGGGACAAGGTGGCACTTGTGTTTCCAGAGGCAGGCGAGGTGCAGGGGTGAGCAGGCGGGCGGGATGCTGGGGGTGCTGGGCAGACTGACCCTGTCTTCCTGTCTTCTGCCTGCAGCTAGCTGA
CircID chr2:241229879|241230233
ORF Type ORF3
Protein Length 34
Nucleotide Length 105
Protein Sequence MRHCDGAPRECGGSHRPHPQSGGGIRESLWALEP
Nucleotide Sequence CTGCGTCACTGTGACGGGGCTCCCAGAGAATGTGGAGGAAGCCATCGACCACATCCTCAATCTGGAGGAGGAATACGTGAGTCTCTGTGGGCCTTGGAGCCCTGA
CircID chr2:241229879|241230233
ORF Type ORF4
Protein Length 29
Nucleotide Length 87
Protein Sequence MQLADVVDSEALQVYMKPPAHEEAKAPSR
Nucleotide Sequence CTGCAGCTAGCTGACGTGGTGGACAGTGAGGCGCTGCAGGTATACATGAAACCCCCAGCACACGAAGAGGCCAAGGCACCTTCCAGA
CircID chr2:241229879|241230233
ORF Type ORF5
Protein Length 96
Nucleotide Length 291
Protein Sequence MEGALASSCAGGFMYTCSASLSTTSASCRQKTGRQGQSAQHPQHPARLLTPAPRLPLETQVPPCPLKLLAGPQAGGRARAPQGSKAHRDSRIPPPD
Nucleotide Sequence CTGGAAGGTGCCTTGGCCTCTTCGTGTGCTGGGGGTTTCATGTATACCTGCAGCGCCTCACTGTCCACCACGTCAGCTAGCTGCAGGCAGAAGACAGGAAGACAGGGTCAGTCTGCCCAGCACCCCCAGCATCCCGCCCGCCTGCTCACCCCTGCACCTCGCCTGCCTCTGGAAACACAAGTGCCACCTTGTCCCCTGAAGCTCCTGGCTGGGCCTCAGGCCGGTGGACGTGCCAGGGCGCCTCAGGGCTCCAAGGCCCACAGAGACTCACGTATTCCTCCTCCAGATTGA
CircID chr2:241229879|241230233
ORF Type ORF6
Protein Length 56
Nucleotide Length 171
Protein Sequence MGVSCIPAAPHCPPRQLAAGRRQEDRVSLPSTPSIPPACSPLHLACLWKHKCHLVP
Nucleotide Sequence CTGGGGGTTTCATGTATACCTGCAGCGCCTCACTGTCCACCACGTCAGCTAGCTGCAGGCAGAAGACAGGAAGACAGGGTCAGTCTGCCCAGCACCCCCAGCATCCCGCCCGCCTGCTCACCCCTGCACCTCGCCTGCCTCTGGAAACACAAGTGCCACCTTGTCCCCTGA
CircID chr2:241229879|241230233
ORF Type ORF7
Protein Length 48
Nucleotide Length 144
Protein Sequence MGLRPVDVPGRLRAPRPTETHVFLLQIEDVVDGFLHILWEPRHSDAVG
Nucleotide Sequence CTGGGCCTCAGGCCGGTGGACGTGCCAGGGCGCCTCAGGGCTCCAAGGCCCACAGAGACTCACGTATTCCTCCTCCAGATTGAGGATGTGGTCGATGGCTTCCTCCACATTCTCTGGGAGCCCCGTCACAGTGACGCAGTTGGG
CircID chr2:241229879|241230233
ORF Type ORF8
Protein Length 90
Nucleotide Length 270
Protein Sequence MQAEDRKTGSVCPAPPASRPPAHPCTSPASGNTSATLSPEAPGWASGRWTCQGASGLQGPQRLTYSSSRLRMWSMASSTFSGSPVTVTQL
Nucleotide Sequence CTGCAGGCAGAAGACAGGAAGACAGGGTCAGTCTGCCCAGCACCCCCAGCATCCCGCCCGCCTGCTCACCCCTGCACCTCGCCTGCCTCTGGAAACACAAGTGCCACCTTGTCCCCTGAAGCTCCTGGCTGGGCCTCAGGCCGGTGGACGTGCCAGGGCGCCTCAGGGCTCCAAGGCCCACAGAGACTCACGTATTCCTCCTCCAGATTGAGGATGTGGTCGATGGCTTCCTCCACATTCTCTGGGAGCCCCGTCACAGTGACGCAGTTG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab