CircRNA Information

General Information
circRNA Basic Information
CircID chr2:241993931|241994124
Strand +
CircType exon
Host Gene
Algorism CIRI2;
Sequence ATCCATTCATCCAGAACACTCCACTCCTGGTGTCTGACCAAATTCCCCATCCTCACTCTTCCTGTCTGATCCCGCTGCCCTGCCCTCAACAAGAAACCTGTGCCTCGACATCTCCTCCTGGTCATTTTCTGTCCCCCAACTGTGCTCATCGGCACAAGTCAGCCGCCTTTGCTCTATTCAGAGTTGAGTGTGAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr2:241993931|241994124 hsa-miR-122-5p 0 0 1
chr2:241993931|241994124 hsa-miR-122-3p 0 0 1
chr2:241993931|241994124 hsa-miR-383-5p 0 0 1
chr2:241993931|241994124 hsa-miR-383-3p 0 0 1
chr2:241993931|241994124 hsa-miR-133b 0 0 1
chr2:241993931|241994124 hsa-miR-578 0 0 1
chr2:241993931|241994124 hsa-miR-625-5p 0 0 1
chr2:241993931|241994124 hsa-miR-625-3p 0 0 1
chr2:241993931|241994124 hsa-miR-653-5p 0 0 1
chr2:241993931|241994124 hsa-miR-653-3p 0 0 1
chr2:241993931|241994124 hsa-miR-765 1 1 1
chr2:241993931|241994124 hsa-miR-665 1 1 1
chr2:241993931|241994124 hsa-miR-1299 0 0 1
chr2:241993931|241994124 hsa-miR-1255a 0 0 1
chr2:241993931|241994124 hsa-miR-1275 0 0 1
chr2:241993931|241994124 hsa-miR-1324 0 0 1
chr2:241993931|241994124 hsa-miR-885-3p 1 1 1
chr2:241993931|241994124 hsa-miR-1207-5p 1 1 1
chr2:241993931|241994124 hsa-miR-1255b 0 0 1
chr2:241993931|241994124 hsa-miR-516b 0 0 1
chr2:241993931|241994124 hsa-miR-133a 0 0 1
chr2:241993931|241994124 hsa-miR-1185 0 0 1
chr2:241993931|241994124 hsa-miR-184 1 1 0
chr2:241993931|241994124 hsa-miR-637 1 0 0
chr2:241993931|241994124 hsa-miR-638 1 0 0
chr2:241993931|241994124 hsa-miR-663a 1 0 0
chr2:241993931|241994124 hsa-miR-762 1 0 0
chr2:241993931|241994124 hsa-miR-921 1 0 0
chr2:241993931|241994124 hsa-miR-1268a 1 0 0
chr2:241993931|241994124 hsa-miR-3132 1 0 0
chr2:241993931|241994124 hsa-miR-3138 1 0 0
chr2:241993931|241994124 hsa-miR-3141 1 0 0
chr2:241993931|241994124 hsa-miR-3147 1 0 0
chr2:241993931|241994124 hsa-miR-3154 1 0 0
chr2:241993931|241994124 hsa-miR-3175 1 0 0
chr2:241993931|241994124 hsa-miR-3178 1 0 0
chr2:241993931|241994124 hsa-miR-3197 1 0 0
chr2:241993931|241994124 hsa-miR-4298 1 0 0
chr2:241993931|241994124 hsa-miR-4270 1 0 0
chr2:241993931|241994124 hsa-miR-4271 1 0 0
chr2:241993931|241994124 hsa-miR-3662 0 1 0
chr2:241993931|241994124 hsa-miR-3937 1 0 0
chr2:241993931|241994124 hsa-miR-1268b 1 0 0
chr2:241993931|241994124 hsa-miR-4427 0 1 0
chr2:241993931|241994124 hsa-miR-4462 1 0 0
chr2:241993931|241994124 hsa-miR-4488 1 0 0
chr2:241993931|241994124 hsa-miR-4492 1 0 0
chr2:241993931|241994124 hsa-miR-4505 1 0 0
chr2:241993931|241994124 hsa-miR-2392 0 1 0
chr2:241993931|241994124 hsa-miR-4514 1 0 0
chr2:241993931|241994124 hsa-miR-3960 1 0 0
chr2:241993931|241994124 hsa-miR-4654 1 0 0
chr2:241993931|241994124 hsa-miR-4673 1 0 0
chr2:241993931|241994124 hsa-miR-4688 1 0 0
chr2:241993931|241994124 hsa-miR-4689 1 0 0
chr2:241993931|241994124 hsa-miR-4710 1 0 0
chr2:241993931|241994124 hsa-miR-4721 1 0 0
chr2:241993931|241994124 hsa-miR-4739 1 0 0
chr2:241993931|241994124 hsa-miR-4784 0 1 0
chr2:241993931|241994124 hsa-miR-5090 1 0 0
chr2:241993931|241994124 hsa-miR-5192 1 0 0
chr2:241993931|241994124 hsa-miR-5698 1 0 0
chr2:241993931|241994124 hsa-miR-5703 1 0 0
chr2:241993931|241994124 hsa-miR-5787 1 0 0
chr2:241993931|241994124 hsa-miR-6086 1 0 0
chr2:241993931|241994124 hsa-miR-6088 1 0 0
chr2:241993931|241994124 hsa-miR-6132 1 1 0
chr2:241993931|241994124 hsa-miR-6165 1 0 0
chr2:241993931|241994124 hsa-miR-8056 1 0 0
chr2:241993931|241994124 hsa-miR-8072 1 0 0
chr2:241993931|241994124 hsa-miR-8085 1 0 0
chr2:241993931|241994124 hsa-miR-12114 1 0 0
chr2:241993931|241994124 hsa-miR-12118 1 0 0
chr2:241993931|241994124 hsa-miR-150-3p 1 0 0
chr2:241993931|241994124 hsa-miR-4433b-3p 1 1 0
chr2:241993931|241994124 hsa-miR-6734-5p 1 0 0
chr2:241993931|241994124 hsa-miR-1287-5p 1 0 0
chr2:241993931|241994124 hsa-miR-4433a-3p 1 1 0
chr2:241993931|241994124 hsa-miR-3150a-3p 1 0 0
chr2:241993931|241994124 hsa-miR-6861-5p 1 0 0
chr2:241993931|241994124 hsa-miR-7106-5p 1 0 0
chr2:241993931|241994124 hsa-miR-6894-5p 1 1 0
chr2:241993931|241994124 hsa-miR-6857-5p 1 0 0
chr2:241993931|241994124 hsa-miR-6799-5p 1 0 0
chr2:241993931|241994124 hsa-miR-6728-5p 1 0 0
chr2:241993931|241994124 hsa-miR-1236-5p 1 0 0
chr2:241993931|241994124 hsa-miR-1227-5p 1 0 0
chr2:241993931|241994124 hsa-miR-4786-5p 1 0 0
chr2:241993931|241994124 hsa-miR-6089 1 0 0
chr2:241993931|241994124 hsa-miR-6757-5p 1 0 0
chr2:241993931|241994124 hsa-miR-4695-5p 1 0 0
chr2:241993931|241994124 hsa-miR-4722-5p 1 0 0
chr2:241993931|241994124 hsa-miR-6730-5p 1 0 0
chr2:241993931|241994124 hsa-miR-6727-5p 1 0 0
chr2:241993931|241994124 hsa-miR-6721-5p 1 0 0
chr2:241993931|241994124 hsa-miR-197-5p 1 0 0
chr2:241993931|241994124 hsa-miR-7845-5p 1 0 0
chr2:241993931|241994124 hsa-miR-3151-5p 1 1 0
chr2:241993931|241994124 hsa-miR-1292-5p 1 0 0
chr2:241993931|241994124 hsa-miR-503-5p 1 0 0
chr2:241993931|241994124 hsa-miR-6793-5p 1 0 0
chr2:241993931|241994124 hsa-miR-6798-5p 1 0 0
chr2:241993931|241994124 hsa-miR-3126-5p 1 0 0
chr2:241993931|241994124 hsa-miR-486-3p 1 0 0
chr2:241993931|241994124 hsa-miR-6881-5p 1 0 0
chr2:241993931|241994124 hsa-miR-6782-5p 1 0 0
chr2:241993931|241994124 hsa-miR-3150b-3p 1 1 0
chr2:241993931|241994124 hsa-miR-6888-5p 1 1 0
chr2:241993931|241994124 hsa-miR-6810-5p 1 0 0
chr2:241993931|241994124 hsa-miR-3934-3p 1 0 0
chr2:241993931|241994124 hsa-miR-7109-5p 1 0 0
chr2:241993931|241994124 hsa-miR-1226-5p 1 1 0
chr2:241993931|241994124 hsa-miR-1229-5p 1 0 0
chr2:241993931|241994124 hsa-miR-4640-5p 1 0 0
chr2:241993931|241994124 hsa-miR-6753-5p 1 0 0
chr2:241993931|241994124 hsa-miR-1908-5p 1 0 0
chr2:241993931|241994124 hsa-miR-1228-5p 1 0 0
chr2:241993931|241994124 hsa-miR-296-3p 1 0 0
chr2:241993931|241994124 hsa-miR-92b-5p 1 0 0
chr2:241993931|241994124 hsa-miR-4732-5p 1 0 0
chr2:241993931|241994124 hsa-miR-4713-3p 1 0 0
chr2:241993931|241994124 hsa-miR-6834-5p 1 0 0
chr2:241993931|241994124 hsa-miR-4743-5p 1 0 0
chr2:241993931|241994124 hsa-miR-4446-3p 1 0 0
chr2:241993931|241994124 hsa-miR-6886-5p 1 0 0
chr2:241993931|241994124 hsa-miR-5010-5p 1 0 0
chr2:241993931|241994124 hsa-miR-7112-5p 1 1 0
chr2:241993931|241994124 hsa-miR-6869-5p 1 0 0
chr2:241993931|241994124 hsa-miR-423-5p 1 0 0
chr2:241993931|241994124 hsa-miR-3191-3p 1 0 0
chr2:241993931|241994124 hsa-miR-744-5p 1 0 0
chr2:241993931|241994124 hsa-miR-6801-5p 1 1 0
chr2:241993931|241994124 hsa-miR-483-5p 1 0 0
chr2:241993931|241994124 hsa-miR-5004-5p 1 0 0
chr2:241993931|241994124 hsa-miR-4520-3p 1 0 0
chr2:241993931|241994124 hsa-miR-10400-5p 1 0 0
chr2:241993931|241994124 hsa-miR-4763-3p 1 0 0
chr2:241993931|241994124 hsa-miR-6870-5p 1 0 0
chr2:241993931|241994124 hsa-miR-6893-5p 1 0 0
chr2:241993931|241994124 hsa-miR-6775-5p 1 0 0
chr2:241993931|241994124 hsa-miR-1343-5p 1 0 0
chr2:241993931|241994124 hsa-miR-6743-5p 1 0 0
chr2:241993931|241994124 hsa-miR-6754-5p 1 0 0
chr2:241993931|241994124 hsa-miR-6756-5p 1 0 0
chr2:241993931|241994124 hsa-miR-6803-5p 1 0 0
chr2:241993931|241994124 hsa-miR-6851-5p 1 0 0
chr2:241993931|241994124 hsa-miR-11181-3p 1 0 0
chr2:241993931|241994124 hsa-miR-6722-3p 1 0 0
chr2:241993931|241994124 hsa-miR-6751-5p 1 0 0
chr2:241993931|241994124 hsa-miR-6797-5p 1 0 0
chr2:241993931|241994124 hsa-miR-6808-5p 1 1 0
chr2:241993931|241994124 hsa-miR-6879-5p 1 1 0
chr2:241993931|241994124 hsa-miR-7111-5p 1 0 0
chr2:241993931|241994124 hsa-miR-5189-5p 1 0 0
chr2:241993931|241994124 hsa-miR-5196-5p 1 0 0
chr2:241993931|241994124 hsa-miR-6780b-5p 1 0 0
chr2:241993931|241994124 hsa-miR-6836-5p 1 1 0
chr2:241993931|241994124 hsa-miR-10396a-5p 1 0 0
chr2:241993931|241994124 hsa-miR-10396b-5p 1 0 0
chr2:241993931|241994124 hsa-miR-328-5p 1 1 0
chr2:241993931|241994124 hsa-miR-4632-5p 1 1 0
chr2:241993931|241994124 hsa-miR-4649-5p 1 0 0
chr2:241993931|241994124 hsa-miR-4725-3p 1 0 0
chr2:241993931|241994124 hsa-miR-4726-5p 1 0 0
chr2:241993931|241994124 hsa-miR-4745-5p 1 0 0
chr2:241993931|241994124 hsa-miR-4749-5p 1 0 0
chr2:241993931|241994124 hsa-miR-6735-5p 1 1 0
chr2:241993931|241994124 hsa-miR-6777-5p 1 0 0
chr2:241993931|241994124 hsa-miR-6794-5p 1 0 0
chr2:241993931|241994124 hsa-miR-6795-5p 1 0 0
chr2:241993931|241994124 hsa-miR-6846-5p 1 0 0
chr2:241993931|241994124 hsa-miR-6848-5p 1 0 0
chr2:241993931|241994124 hsa-miR-6858-5p 1 0 0
chr2:241993931|241994124 hsa-miR-6887-5p 1 0 0
chr2:241993931|241994124 hsa-miR-3187-5p 1 0 0
chr2:241993931|241994124 hsa-miR-4436b-3p 1 1 0
chr2:241993931|241994124 hsa-miR-4723-5p 1 0 0
chr2:241993931|241994124 hsa-miR-6831-5p 1 0 0
chr2:241993931|241994124 hsa-miR-939-5p 1 0 0
chr2:241993931|241994124 hsa-miR-4758-5p 1 0 0
chr2:241993931|241994124 hsa-miR-4769-5p 1 0 0
chr2:241993931|241994124 hsa-miR-6511a-5p 1 0 0
chr2:241993931|241994124 hsa-miR-3198 1 0 0
chr2:241993931|241994124 hsa-miR-6856-5p 1 0 0
chr2:241993931|241994124 hsa-miR-7843-5p 0 1 0
chr2:241993931|241994124 hsa-miR-4665-5p 1 1 0
chr2:241993931|241994124 hsa-miR-6736-5p 1 0 0
chr2:241993931|241994124 hsa-miR-3679-5p 1 0 0
chr2:241993931|241994124 hsa-miR-6785-5p 1 0 0
chr2:241993931|241994124 hsa-miR-769-3p 1 0 0
chr2:241993931|241994124 hsa-miR-9851-3p 0 1 0
chr2:241993931|241994124 hsa-miR-2682-5p 1 0 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr2:241993931|241994124
ORF Type ORF1
Protein Length 25
Nucleotide Length 75
Protein Sequence MVIFCPPTVLIGTSQPPLLYSELSV
Nucleotide Sequence CTGGTCATTTTCTGTCCCCCAACTGTGCTCATCGGCACAAGTCAGCCGCCTTTGCTCTATTCAGAGTTGAGTGTG
CircID chr2:241993931|241994124
ORF Type ORF2
Protein Length 41
Nucleotide Length 126
Protein Sequence MSDPAALPSTRNLCLDISSWSFSVPQLCSSAQVSRLCSIQS
Nucleotide Sequence CTGTCTGATCCCGCTGCCCTGCCCTCAACAAGAAACCTGTGCCTCGACATCTCCTCCTGGTCATTTTCTGTCCCCCAACTGTGCTCATCGGCACAAGTCAGCCGCCTTTGCTCTATTCAGAGTTGA
CircID chr2:241993931|241994124
ORF Type ORF3
Protein Length 56
Nucleotide Length 168
Protein Sequence MVSDQIPHPHSSCLIPLPCPQQETCASTSPPGHFLSPNCAHRHKSAAFALFRVECD
Nucleotide Sequence CTGGTGTCTGACCAAATTCCCCATCCTCACTCTTCCTGTCTGATCCCGCTGCCCTGCCCTCAACAAGAAACCTGTGCCTCGACATCTCCTCCTGGTCATTTTCTGTCCCCCAACTGTGCTCATCGGCACAAGTCAGCCGCCTTTGCTCTATTCAGAGTTGAGTGTGAC
CircID chr2:241993931|241994124
ORF Type ORF4
Protein Length 49
Nucleotide Length 147
Protein Sequence MSTVGGQKMTRRRCRGTGFLLRAGQRDQTGRVRMGNLVRHQEWSVLDEW
Nucleotide Sequence ATGAGCACAGTTGGGGGACAGAAAATGACCAGGAGGAGATGTCGAGGCACAGGTTTCTTGTTGAGGGCAGGGCAGCGGGATCAGACAGGAAGAGTGAGGATGGGGAATTTGGTCAGACACCAGGAGTGGAGTGTTCTGGATGAATGG
CircID chr2:241993931|241994124
ORF Type ORF5
Protein Length 51
Nucleotide Length 156
Protein Sequence MTCADEHSWGTENDQEEMSRHRFLVEGRAAGSDRKSEDGEFGQTPGVECSG
Nucleotide Sequence CTGACTTGTGCCGATGAGCACAGTTGGGGGACAGAAAATGACCAGGAGGAGATGTCGAGGCACAGGTTTCTTGTTGAGGGCAGGGCAGCGGGATCAGACAGGAAGAGTGAGGATGGGGAATTTGGTCAGACACCAGGAGTGGAGTGTTCTGGATGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab