CircRNA Information

General Information
circRNA Basic Information
CircID chr2:24768079|24768302
Strand +
CircType exon
Host Gene ENSG00000084676.14;
Algorism CIRI2;
Sequence CAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGACGTCAGCAAACACCTGAACCTGTTGCACCTGCTGGAACACAAATAAAAGATGTGTTTAGACAGAAGGGTCTGCCCCCCCGGCTTATGAGTGGGTACTACTTGAAGTGGAAACTCACTAGAGCATTCCTCTAGTCTGTAGTCACCACAGAGAAGAACTCTTCTGTCTTCTTGTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr2:24768079|24768302 hsa-miR-26b-5p 0 0 1
chr2:24768079|24768302 hsa-miR-26b-3p 0 0 1
chr2:24768079|24768302 hsa-miR-214-5p 0 0 1
chr2:24768079|24768302 hsa-miR-214-3p 0 0 1
chr2:24768079|24768302 hsa-miR-599 0 0 1
chr2:24768079|24768302 hsa-miR-877-5p 0 0 1
chr2:24768079|24768302 hsa-miR-877-3p 0 0 1
chr2:24768079|24768302 hsa-miR-921 0 0 1
chr2:24768079|24768302 hsa-miR-942-5p 0 0 1
chr2:24768079|24768302 hsa-miR-942-3p 0 0 1
chr2:24768079|24768302 hsa-miR-1237-5p 0 0 1
chr2:24768079|24768302 hsa-miR-1237-3p 0 0 1
chr2:24768079|24768302 hsa-miR-1297 0 0 1
chr2:24768079|24768302 hsa-miR-1825 0 0 1
chr2:24768079|24768302 hsa-miR-125a-3p 0 0 1
chr2:24768079|24768302 hsa-miR-486-3p 0 0 1
chr2:24768079|24768302 hsa-miR-199a-5p 0 1 1
chr2:24768079|24768302 hsa-miR-628-5p 0 0 1
chr2:24768079|24768302 hsa-miR-199b-5p 0 1 1
chr2:24768079|24768302 hsa-miR-338-3p 0 0 1
chr2:24768079|24768302 hsa-miR-26a 0 0 1
chr2:24768079|24768302 hsa-miR-663 0 0 1
chr2:24768079|24768302 hsa-miR-663a 1 0 0
chr2:24768079|24768302 hsa-miR-3125 0 1 0
chr2:24768079|24768302 hsa-miR-3138 1 0 0
chr2:24768079|24768302 hsa-miR-3916 0 1 0
chr2:24768079|24768302 hsa-miR-4465 0 1 0
chr2:24768079|24768302 hsa-miR-5697 0 1 0
chr2:24768079|24768302 hsa-miR-8075 1 0 0
chr2:24768079|24768302 hsa-miR-9718 1 0 0
chr2:24768079|24768302 hsa-miR-134-5p 0 1 0
chr2:24768079|24768302 hsa-miR-6089 1 0 0
chr2:24768079|24768302 hsa-miR-7160-5p 1 0 0
chr2:24768079|24768302 hsa-miR-491-5p 0 1 0
chr2:24768079|24768302 hsa-miR-7109-5p 1 1 0
chr2:24768079|24768302 hsa-miR-4783-3p 1 0 0
chr2:24768079|24768302 hsa-miR-1908-5p 0 1 0
chr2:24768079|24768302 hsa-miR-659-5p 0 1 0
chr2:24768079|24768302 hsa-miR-5088-3p 0 1 0
chr2:24768079|24768302 hsa-miR-520g-5p 0 1 0
chr2:24768079|24768302 hsa-miR-6839-3p 0 1 0
chr2:24768079|24768302 hsa-miR-10396b-5p 1 0 0
chr2:24768079|24768302 hsa-miR-328-5p 0 1 0
chr2:24768079|24768302 hsa-miR-6790-5p 1 0 0
chr2:24768079|24768302 hsa-miR-3619-5p 0 1 0
chr2:24768079|24768302 hsa-miR-26a-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr2:24768079|24768302
ORF Type ORF1
Protein Length 47
Nucleotide Length 144
Protein Sequence MYTGRQQTPEPVAPAGTQIKDVFRQKGLPPRLMSGYYLKWKLTRAFL
Nucleotide Sequence CTGTACACTGGACGTCAGCAAACACCTGAACCTGTTGCACCTGCTGGAACACAAATAAAAGATGTGTTTAGACAGAAGGGTCTGCCCCCCCGGCTTATGAGTGGGTACTACTTGAAGTGGAAACTCACTAGAGCATTCCTCTAG

CircID chr2:24768079|24768302
ORF Type ORF2
Protein Length 30
Nucleotide Length 93
Protein Sequence MVQVRVPAYQIHCTLDVSKHLNLLHLLEHK
Nucleotide Sequence CTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGACGTCAGCAAACACCTGAACCTGTTGCACCTGCTGGAACACAAATAA

CircID chr2:24768079|24768302
ORF Type ORF3
Protein Length 25
Nucleotide Length 78
Protein Sequence MSKHIFYLCSSRCNRFRCLLTSSVQ
Nucleotide Sequence CTGTCTAAACACATCTTTTATTTGTGTTCCAGCAGGTGCAACAGGTTCAGGTGTTTGCTGACGTCCAGTGTACAGTGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites