CircNet

General Information

circRNA Basic Information

CircID	chr2:25759482\|25771540
Strand	-
CircType	exon
Host Gene	ENSG00000143970.16;
Algorism	CIRI2;find_circ;DCC;
Sequence	TATCGTCGTCCTCCCCGCAGTCAGGCTGCCCATCACCCACCATTCCAGCAGGTAAAGTCATTTCTCCATCACAGAAGCACAGCAAGAAGGCACTAAAGCAGGCGCTAAAGCAGCAACAGCAGAAGAAGCAGCAGCAGCAATGCAGGCCAAGCATATCCATCTCCTCCAACCAGCATCTCTCACTAAAGACTGTCAAAGCAGCCAGTGACTCTGTACCTGCCAAACCTGCAACATGGGAAGGAAAGCAATCTGATGGACAGACAGGCAGCCCTCAAAACTCAAACTCCAGCTTTTCTTCCTCAGTTAAAGTGGAAAATACTTTACTAGGCTTGGGGAAGAAGTCATTCCAGAGATCTGAGAGACTCCATACCAGACAAATGAAAAGAACTAAATGTGCTGACATTGACGTTGAGACACCGGACTCCATTCTGGTTAATACAAATCTGCGAGCACTGATCAACAAGCACACATTTTCAGTCCTTCCTGGAGATTGCCAGCAACGACTGCTTTTACTACTCCCAGAGGTAGATCGACAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr2:25759482\|25771540	hsa-miR-298	1	1	1
chr2:25759482\|25771540	hsa-miR-3665	1	1	1
chr2:25759482\|25771540	hsa-miR-3937	1	1	1
chr2:25759482\|25771540	hsa-miR-4530	1	1	1
chr2:25759482\|25771540	hsa-miR-1972	1	1	1
chr2:25759482\|25771540	hsa-miR-6720-5p	1	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr2:25759482\|25771540
ORF Type	ORF1
Protein Length	178
Nucleotide Length	534
Protein Sequence	SSSSPQSGCPSPTIPAGKVISPSQKHSKKALKQALKQQQQKKQQQQCRPSISISSNQHLSLKTVKAASDSVPAKPATWEGKQSDGQTGSPQNSNSSFSSSVKVENTLLGLGKKSFQRSERLHTRQMKRTKCADIDVETPDSILVNTNLRALINKHTFSVLPGDCQQRLLLLLPEVDRQ
Nucleotide Sequence	TCGTCGTCCTCCCCGCAGTCAGGCTGCCCATCACCCACCATTCCAGCAGGTAAAGTCATTTCTCCATCACAGAAGCACAGCAAGAAGGCACTAAAGCAGGCGCTAAAGCAGCAACAGCAGAAGAAGCAGCAGCAGCAATGCAGGCCAAGCATATCCATCTCCTCCAACCAGCATCTCTCACTAAAGACTGTCAAAGCAGCCAGTGACTCTGTACCTGCCAAACCTGCAACATGGGAAGGAAAGCAATCTGATGGACAGACAGGCAGCCCTCAAAACTCAAACTCCAGCTTTTCTTCCTCAGTTAAAGTGGAAAATACTTTACTAGGCTTGGGGAAGAAGTCATTCCAGAGATCTGAGAGACTCCATACCAGACAAATGAAAAGAACTAAATGTGCTGACATTGACGTTGAGACACCGGACTCCATTCTGGTTAATACAAATCTGCGAGCACTGATCAACAAGCACACATTTTCAGTCCTTCCTGGAGATTGCCAGCAACGACTGCTTTTACTACTCCCAGAGGTAGATCGACAG

CircID	chr2:25759482\|25771540
ORF Type	ORF2
Protein Length	53
Nucleotide Length	159
Protein Sequence	MDMLGLHCCCCFFCCCCFSACFSAFLLCFCDGEMTLPAGMVGDGQPDCGEDDD
Nucleotide Sequence	ATGGATATGCTTGGCCTGCATTGCTGCTGCTGCTTCTTCTGCTGTTGCTGCTTTAGCGCCTGCTTTAGTGCCTTCTTGCTGTGCTTCTGTGATGGAGAAATGACTTTACCTGCTGGAATGGTGGGTGATGGGCAGCCTGACTGCGGGGAGGACGACGAT

CircID	chr2:25759482\|25771540
ORF Type	ORF3
Protein Length	52
Nucleotide Length	156
Protein Sequence	MESGVSTSMSAHLVLFICLVWSLSDLWNDFFPKPSKVFSTLTEEEKLEFEF*
Nucleotide Sequence	ATGGAGTCCGGTGTCTCAACGTCAATGTCAGCACATTTAGTTCTTTTCATTTGTCTGGTATGGAGTCTCTCAGATCTCTGGAATGACTTCTTCCCCAAGCCTAGTAAAGTATTTTCCACTTTAACTGAGGAAGAAAAGCTGGAGTTTGAGTTTTGA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr2:25759482\|25771540	ELAVL1	0	1	4
chr2:25759482\|25771540	SF3B4	1	0	0
chr2:25759482\|25771540	YTHDF3	0	1	0
chr2:25759482\|25771540	PRPF8	0	1	3
chr2:25759482\|25771540	UPF1	0	1	0
chr2:25759482\|25771540	NUDT21	0	2	0
chr2:25759482\|25771540	RBM15B	0	1	0
chr2:25759482\|25771540	FUS	1	1	0
chr2:25759482\|25771540	EIF3H	0	1	0
chr2:25759482\|25771540	QKI	1	0	0
chr2:25759482\|25771540	SRSF1	0	0	3
chr2:25759482\|25771540	NOP58	0	1	6
chr2:25759482\|25771540	SRSF3	0	0	1
chr2:25759482\|25771540	U2AF1	2	0	4
chr2:25759482\|25771540	EIF3A	0	1	0
chr2:25759482\|25771540	ADAR	0	1	0
chr2:25759482\|25771540	U2AF2	8	0	6
chr2:25759482\|25771540	DDX54	0	0	8
chr2:25759482\|25771540	GRWD1	0	0	1
chr2:25759482\|25771540	HNRNPL	1	0	0
chr2:25759482\|25771540	SF3A3	4	0	1
chr2:25759482\|25771540	PTBP1	1	0	2
chr2:25759482\|25771540	TRA2A	0	0	2
chr2:25759482\|25771540	DDX3X	0	21	0
chr2:25759482\|25771540	SMNDC1	1	0	1
chr2:25759482\|25771540	ACIN1	0	0	4
chr2:25759482\|25771540	LIN28B	0	2	0
chr2:25759482\|25771540	IGF2BP1	0	0	8
chr2:25759482\|25771540	IGF2BP3	0	0	5
chr2:25759482\|25771540	IGF2BP2	2	0	16
chr2:25759482\|25771540	FTO	0	1	0
chr2:25759482\|25771540	TARDBP	1	0	0
chr2:25759482\|25771540	BUD13	1	0	4
chr2:25759482\|25771540	RBM47	0	1	3
chr2:25759482\|25771540	EIF4G2	0	0	1
chr2:25759482\|25771540	CSTF2T	0	0	2
chr2:25759482\|25771540	AGO2	0	0	7
chr2:25759482\|25771540	ATXN2	0	1	0
chr2:25759482\|25771540	EIF4A3	2	1	8
chr2:25759482\|25771540	FBL	1	0	3

CircRNA Information