CircRNA Information

General Information
circRNA Basic Information
CircID chr2:26775137|26775482
Strand -
CircType exon
Host Gene ENSG00000213699.7;
Algorism CIRI2;
Sequence CCCCAGCAGCCCTTCAACCCTCTTCTTTTCCTGCCCCCAGCGCTCTGTGACATGACAGGGACCAGCCTCATGTATGTGGGTGAGTAACCAGGCCAGGCTGAGAAGGGCTCAGGGGAAGCTGTGGCTGAAGGGGCTACTGGTGAAACAGCCCTATCCCACCCACCTCCACTTCATCCCACCATTCCCCCAGACTTCACACGCACAGGCACACAGGCAGGACTGATCGAGCGCTTACTATGAGCTTGGCATGTCTATCACCAAAGACCCCTTAGTGACAGATGGCCTTCGCCTTGGGAAGCTAACTGTAATTTGTTTCTCCTTTCCTAGCTCTGAACATGACCAGTGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr2:26775137|26775482 hsa-miR-197-5p 0 0 1
chr2:26775137|26775482 hsa-miR-197-3p 0 0 1
chr2:26775137|26775482 hsa-miR-210-5p 0 0 1
chr2:26775137|26775482 hsa-miR-210-3p 0 0 1
chr2:26775137|26775482 hsa-miR-518e-5p 0 0 1
chr2:26775137|26775482 hsa-miR-518e-3p 0 0 1
chr2:26775137|26775482 hsa-miR-573 0 0 1
chr2:26775137|26775482 hsa-miR-625-5p 0 0 1
chr2:26775137|26775482 hsa-miR-625-3p 0 0 1
chr2:26775137|26775482 hsa-miR-637 1 1 1
chr2:26775137|26775482 hsa-miR-668-5p 0 0 1
chr2:26775137|26775482 hsa-miR-668-3p 0 0 1
chr2:26775137|26775482 hsa-miR-541-5p 0 0 1
chr2:26775137|26775482 hsa-miR-541-3p 0 0 1
chr2:26775137|26775482 hsa-miR-1226-5p 0 0 1
chr2:26775137|26775482 hsa-miR-1226-3p 0 0 1
chr2:26775137|26775482 hsa-miR-1293 0 0 1
chr2:26775137|26775482 hsa-miR-1275 1 0 1
chr2:26775137|26775482 hsa-miR-1225-3p 0 0 1
chr2:26775137|26775482 hsa-miR-486-3p 0 0 1
chr2:26775137|26775482 hsa-miR-296-3p 0 1 1
chr2:26775137|26775482 hsa-miR-485-5p 0 1 1
chr2:26775137|26775482 hsa-miR-193a-5p 0 1 1
chr2:26775137|26775482 hsa-miR-339-5p 0 1 1
chr2:26775137|26775482 hsa-miR-654-5p 0 0 1
chr2:26775137|26775482 hsa-miR-409-5p 0 0 1
chr2:26775137|26775482 hsa-miR-331-3p 0 1 1
chr2:26775137|26775482 hsa-miR-582-5p 0 0 1
chr2:26775137|26775482 hsa-miR-125a-5p 0 1 1
chr2:26775137|26775482 hsa-miR-455-3p 0 0 1
chr2:26775137|26775482 hsa-miR-1274a 0 0 1
chr2:26775137|26775482 hsa-miR-1233 0 0 1
chr2:26775137|26775482 hsa-miR-125b 0 0 1
chr2:26775137|26775482 hsa-miR-550 0 0 1
chr2:26775137|26775482 hsa-miR-1274b 0 0 1
chr2:26775137|26775482 hsa-miR-9 0 0 1
chr2:26775137|26775482 hsa-miR-129-3p 0 0 1
chr2:26775137|26775482 hsa-miR-608 1 0 0
chr2:26775137|26775482 hsa-miR-661 1 0 0
chr2:26775137|26775482 hsa-miR-658 1 0 0
chr2:26775137|26775482 hsa-miR-762 1 0 0
chr2:26775137|26775482 hsa-miR-760 1 0 0
chr2:26775137|26775482 hsa-miR-297 1 0 0
chr2:26775137|26775482 hsa-miR-1200 0 1 0
chr2:26775137|26775482 hsa-miR-1268a 1 0 0
chr2:26775137|26775482 hsa-miR-2110 1 0 0
chr2:26775137|26775482 hsa-miR-3141 1 0 0
chr2:26775137|26775482 hsa-miR-3154 1 1 0
chr2:26775137|26775482 hsa-miR-3176 0 1 0
chr2:26775137|26775482 hsa-miR-3185 1 0 0
chr2:26775137|26775482 hsa-miR-4298 1 0 0
chr2:26775137|26775482 hsa-miR-4260 1 0 0
chr2:26775137|26775482 hsa-miR-3659 1 0 0
chr2:26775137|26775482 hsa-miR-3911 1 1 0
chr2:26775137|26775482 hsa-miR-3936 0 1 0
chr2:26775137|26775482 hsa-miR-1268b 1 0 0
chr2:26775137|26775482 hsa-miR-4428 1 0 0
chr2:26775137|26775482 hsa-miR-4447 1 0 0
chr2:26775137|26775482 hsa-miR-4462 1 0 0
chr2:26775137|26775482 hsa-miR-4488 1 0 0
chr2:26775137|26775482 hsa-miR-4507 1 0 0
chr2:26775137|26775482 hsa-miR-4516 1 0 0
chr2:26775137|26775482 hsa-miR-4525 1 0 0
chr2:26775137|26775482 hsa-miR-4540 1 1 0
chr2:26775137|26775482 hsa-miR-4651 1 1 0
chr2:26775137|26775482 hsa-miR-4654 1 1 0
chr2:26775137|26775482 hsa-miR-4658 1 0 0
chr2:26775137|26775482 hsa-miR-4675 0 1 0
chr2:26775137|26775482 hsa-miR-4688 1 0 0
chr2:26775137|26775482 hsa-miR-4689 1 0 0
chr2:26775137|26775482 hsa-miR-4734 1 0 0
chr2:26775137|26775482 hsa-miR-4736 1 0 0
chr2:26775137|26775482 hsa-miR-5090 1 0 0
chr2:26775137|26775482 hsa-miR-5191 1 0 0
chr2:26775137|26775482 hsa-miR-5698 1 0 0
chr2:26775137|26775482 hsa-miR-5787 1 0 0
chr2:26775137|26775482 hsa-miR-6088 1 0 0
chr2:26775137|26775482 hsa-miR-6124 1 1 0
chr2:26775137|26775482 hsa-miR-6127 1 0 0
chr2:26775137|26775482 hsa-miR-6131 0 1 0
chr2:26775137|26775482 hsa-miR-6134 0 1 0
chr2:26775137|26775482 hsa-miR-7974 1 0 0
chr2:26775137|26775482 hsa-miR-8089 1 0 0
chr2:26775137|26775482 hsa-miR-12114 0 1 0
chr2:26775137|26775482 hsa-miR-12115 1 1 0
chr2:26775137|26775482 hsa-miR-12122 1 1 0
chr2:26775137|26775482 hsa-miR-150-3p 1 0 0
chr2:26775137|26775482 hsa-miR-4433b-3p 1 0 0
chr2:26775137|26775482 hsa-miR-4731-5p 1 1 0
chr2:26775137|26775482 hsa-miR-6809-5p 1 0 0
chr2:26775137|26775482 hsa-miR-215-3p 0 1 0
chr2:26775137|26775482 hsa-miR-6799-5p 1 0 0
chr2:26775137|26775482 hsa-miR-5187-5p 1 1 0
chr2:26775137|26775482 hsa-miR-6515-5p 1 0 0
chr2:26775137|26775482 hsa-miR-6089 1 0 0
chr2:26775137|26775482 hsa-miR-6873-5p 1 0 0
chr2:26775137|26775482 hsa-miR-6880-5p 1 0 0
chr2:26775137|26775482 hsa-miR-6867-5p 1 0 0
chr2:26775137|26775482 hsa-miR-6744-5p 1 0 0
chr2:26775137|26775482 hsa-miR-4709-3p 1 0 0
chr2:26775137|26775482 hsa-miR-4722-5p 1 0 0
chr2:26775137|26775482 hsa-miR-6890-5p 1 0 0
chr2:26775137|26775482 hsa-miR-6727-5p 1 0 0
chr2:26775137|26775482 hsa-miR-6759-5p 1 0 0
chr2:26775137|26775482 hsa-miR-8069 1 0 0
chr2:26775137|26775482 hsa-miR-6776-5p 1 0 0
chr2:26775137|26775482 hsa-miR-6742-5p 1 0 0
chr2:26775137|26775482 hsa-miR-6716-5p 1 1 0
chr2:26775137|26775482 hsa-miR-6748-5p 1 1 0
chr2:26775137|26775482 hsa-miR-6772-5p 1 0 0
chr2:26775137|26775482 hsa-miR-6793-5p 1 0 0
chr2:26775137|26775482 hsa-miR-6796-5p 1 0 0
chr2:26775137|26775482 hsa-miR-6829-5p 0 1 0
chr2:26775137|26775482 hsa-miR-6732-5p 1 0 0
chr2:26775137|26775482 hsa-miR-6881-5p 1 0 0
chr2:26775137|26775482 hsa-miR-6782-5p 1 0 0
chr2:26775137|26775482 hsa-miR-6821-5p 1 0 0
chr2:26775137|26775482 hsa-miR-6810-5p 1 0 0
chr2:26775137|26775482 hsa-miR-7855-5p 1 0 0
chr2:26775137|26775482 hsa-miR-6735-3p 1 0 0
chr2:26775137|26775482 hsa-miR-6786-5p 1 0 0
chr2:26775137|26775482 hsa-miR-6835-5p 1 0 0
chr2:26775137|26775482 hsa-miR-7109-5p 1 0 0
chr2:26775137|26775482 hsa-miR-3944-3p 1 0 0
chr2:26775137|26775482 hsa-miR-1229-5p 1 0 0
chr2:26775137|26775482 hsa-miR-4640-5p 1 0 0
chr2:26775137|26775482 hsa-miR-3127-5p 1 1 0
chr2:26775137|26775482 hsa-miR-6823-5p 1 0 0
chr2:26775137|26775482 hsa-miR-877-5p 1 0 0
chr2:26775137|26775482 hsa-miR-3202 1 1 0
chr2:26775137|26775482 hsa-miR-4787-5p 1 0 0
chr2:26775137|26775482 hsa-miR-149-3p 1 0 0
chr2:26775137|26775482 hsa-miR-550b-2-5p 1 1 0
chr2:26775137|26775482 hsa-miR-6781-5p 1 0 0
chr2:26775137|26775482 hsa-miR-6811-3p 1 1 0
chr2:26775137|26775482 hsa-miR-1910-5p 1 1 0
chr2:26775137|26775482 hsa-miR-6886-3p 0 1 0
chr2:26775137|26775482 hsa-miR-5088-3p 0 1 0
chr2:26775137|26775482 hsa-miR-449b-3p 0 1 0
chr2:26775137|26775482 hsa-miR-6838-3p 0 1 0
chr2:26775137|26775482 hsa-miR-10400-5p 1 0 0
chr2:26775137|26775482 hsa-miR-1207-5p 1 0 0
chr2:26775137|26775482 hsa-miR-1233-5p 1 0 0
chr2:26775137|26775482 hsa-miR-4763-3p 1 0 0
chr2:26775137|26775482 hsa-miR-6769b-5p 1 1 0
chr2:26775137|26775482 hsa-miR-6778-5p 1 0 0
chr2:26775137|26775482 hsa-miR-6812-5p 1 1 0
chr2:26775137|26775482 hsa-miR-6816-5p 1 0 0
chr2:26775137|26775482 hsa-miR-6870-5p 1 0 0
chr2:26775137|26775482 hsa-miR-6726-5p 1 0 0
chr2:26775137|26775482 hsa-miR-6743-5p 1 0 0
chr2:26775137|26775482 hsa-miR-6752-5p 1 0 0
chr2:26775137|26775482 hsa-miR-6756-5p 1 1 0
chr2:26775137|26775482 hsa-miR-6769a-5p 1 1 0
chr2:26775137|26775482 hsa-miR-6803-5p 1 1 0
chr2:26775137|26775482 hsa-miR-6842-5p 1 0 0
chr2:26775137|26775482 hsa-miR-6851-5p 1 0 0
chr2:26775137|26775482 hsa-miR-7110-5p 1 0 0
chr2:26775137|26775482 hsa-miR-10401-5p 1 0 0
chr2:26775137|26775482 hsa-miR-6751-5p 1 0 0
chr2:26775137|26775482 hsa-miR-6763-5p 1 0 0
chr2:26775137|26775482 hsa-miR-6779-5p 1 0 0
chr2:26775137|26775482 hsa-miR-6797-5p 1 0 0
chr2:26775137|26775482 hsa-miR-6879-5p 1 1 0
chr2:26775137|26775482 hsa-miR-7111-5p 1 0 0
chr2:26775137|26775482 hsa-miR-3127-3p 0 1 0
chr2:26775137|26775482 hsa-miR-320a-5p 0 1 0
chr2:26775137|26775482 hsa-miR-1915-3p 1 0 0
chr2:26775137|26775482 hsa-miR-3620-5p 1 0 0
chr2:26775137|26775482 hsa-miR-5196-5p 1 0 0
chr2:26775137|26775482 hsa-miR-10526-3p 1 0 0
chr2:26775137|26775482 hsa-miR-1237-5p 1 0 0
chr2:26775137|26775482 hsa-miR-328-5p 1 0 0
chr2:26775137|26775482 hsa-miR-4685-5p 1 0 0
chr2:26775137|26775482 hsa-miR-6795-5p 1 0 0
chr2:26775137|26775482 hsa-miR-6846-5p 1 0 0
chr2:26775137|26775482 hsa-miR-6848-5p 1 0 0
chr2:26775137|26775482 hsa-miR-6858-5p 1 0 0
chr2:26775137|26775482 hsa-miR-6887-5p 1 0 0
chr2:26775137|26775482 hsa-miR-4436b-3p 1 0 0
chr2:26775137|26775482 hsa-miR-6885-5p 1 0 0
chr2:26775137|26775482 hsa-miR-4758-5p 1 0 0
chr2:26775137|26775482 hsa-miR-4769-5p 1 1 0
chr2:26775137|26775482 hsa-miR-3198 1 1 0
chr2:26775137|26775482 hsa-miR-3940-5p 1 0 0
chr2:26775137|26775482 hsa-miR-30c-1-3p 1 1 0
chr2:26775137|26775482 hsa-miR-6758-5p 1 0 0
chr2:26775137|26775482 hsa-miR-1271-3p 0 1 0
chr2:26775137|26775482 hsa-miR-6855-5p 1 0 0
chr2:26775137|26775482 hsa-miR-3173-3p 1 0 0
chr2:26775137|26775482 hsa-miR-6891-5p 1 0 0
chr2:26775137|26775482 hsa-miR-6766-5p 0 1 0
chr2:26775137|26775482 hsa-miR-4667-5p 1 0 0
chr2:26775137|26775482 hsa-miR-6790-5p 1 0 0
chr2:26775137|26775482 hsa-miR-2682-3p 0 1 0
chr2:26775137|26775482 hsa-miR-6791-5p 1 0 0
chr2:26775137|26775482 hsa-miR-550a-3-5p 0 1 0
chr2:26775137|26775482 hsa-miR-550a-5p 0 1 0
chr2:26775137|26775482 hsa-miR-6862-3p 0 1 0
chr2:26775137|26775482 hsa-miR-320a-3p 1 0 0
chr2:26775137|26775482 hsa-miR-6751-3p 0 1 0
chr2:26775137|26775482 hsa-miR-6781-3p 0 1 0
chr2:26775137|26775482 hsa-miR-4676-3p 0 1 0
chr2:26775137|26775482 hsa-miR-3922-3p 0 1 0
chr2:26775137|26775482 hsa-miR-514b-5p 0 1 0
chr2:26775137|26775482 hsa-miR-125b-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr2:26775137|26775482
ORF Type ORF1
Protein Length 49
Nucleotide Length 150
Protein Sequence MWVSNQARLRRAQGKLWLKGLLVKQPYPTHLHFIPPFPQTSHAQAHRQD
Nucleotide Sequence ATGTGGGTGAGTAACCAGGCCAGGCTGAGAAGGGCTCAGGGGAAGCTGTGGCTGAAGGGGCTACTGGTGAAACAGCCCTATCCCACCCACCTCCACTTCATCCCACCATTCCCCCAGACTTCACACGCACAGGCACACAGGCAGGACTGA
CircID chr2:26775137|26775482
ORF Type ORF2
Protein Length 33
Nucleotide Length 99
Protein Sequence MSITKDPLVTDGLRLGKLTVICFSFPSSEHDQC
Nucleotide Sequence ATGTCTATCACCAAAGACCCCTTAGTGACAGATGGCCTTCGCCTTGGGAAGCTAACTGTAATTTGTTTCTCCTTTCCTAGCTCTGAACATGACCAGTGC
CircID chr2:26775137|26775482
ORF Type ORF3
Protein Length 32
Nucleotide Length 96
Protein Sequence MAWLLTHIHEAGPCHVTERWGQEKKRVEGLLG
Nucleotide Sequence CTGGCCTGGTTACTCACCCACATACATGAGGCTGGTCCCTGTCATGTCACAGAGCGCTGGGGGCAGGAAAAGAAGAGGGTTGAAGGGCTGCTGGGG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab