CircRNA Information

General Information
circRNA Basic Information
CircID chr2:27087014|27087256
Strand -
CircType exon
Host Gene ENSG00000138030.11;
Algorism CIRI2;
Sequence CGGGGACCAAGACCTCTGGGTTGGCTTTCCTAGACCCGCTCGGGTCTTCGGGTGTCGCGAGGAAGGGCCCTGCTCCTTTCGTTCCCTGCACCCCTGGCCGCTGCAGGTGGCTCCCTGGAGGAGGAGCTCCCACGCGGAGGAGGAGCCAGGGCAGCTGGGAGCGGGGACACCATCCTCCTGGATAAGAGGCAGAGGCCGGGAGGAACCCCGTCAGCCGGGCGGGCAGGAAGCTCTGGGAGTAGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr2:27087014|27087256 hsa-miR-22-5p 0 0 1
chr2:27087014|27087256 hsa-miR-22-3p 0 0 1
chr2:27087014|27087256 hsa-miR-149-5p 0 0 1
chr2:27087014|27087256 hsa-miR-149-3p 0 0 1
chr2:27087014|27087256 hsa-miR-133b 0 1 1
chr2:27087014|27087256 hsa-miR-601 0 1 1
chr2:27087014|27087256 hsa-miR-874-5p 0 0 1
chr2:27087014|27087256 hsa-miR-874-3p 0 0 1
chr2:27087014|27087256 hsa-miR-665 0 1 1
chr2:27087014|27087256 hsa-miR-920 0 0 1
chr2:27087014|27087256 hsa-miR-1238-5p 0 0 1
chr2:27087014|27087256 hsa-miR-1238-3p 0 0 1
chr2:27087014|27087256 hsa-miR-1292-5p 0 0 1
chr2:27087014|27087256 hsa-miR-1292-3p 0 0 1
chr2:27087014|27087256 hsa-miR-146b-3p 0 0 1
chr2:27087014|27087256 hsa-miR-1184 0 1 1
chr2:27087014|27087256 hsa-miR-342-5p 0 0 1
chr2:27087014|27087256 hsa-miR-516a-3p 0 0 1
chr2:27087014|27087256 hsa-miR-133a 0 0 1
chr2:27087014|27087256 hsa-miR-326 1 0 0
chr2:27087014|27087256 hsa-miR-346 1 0 0
chr2:27087014|27087256 hsa-miR-551a 1 0 0
chr2:27087014|27087256 hsa-miR-572 1 0 0
chr2:27087014|27087256 hsa-miR-596 1 0 0
chr2:27087014|27087256 hsa-miR-611 0 1 0
chr2:27087014|27087256 hsa-miR-892b 0 1 0
chr2:27087014|27087256 hsa-miR-940 1 0 0
chr2:27087014|27087256 hsa-miR-1913 1 0 0
chr2:27087014|27087256 hsa-miR-1976 0 1 0
chr2:27087014|27087256 hsa-miR-718 1 0 0
chr2:27087014|27087256 hsa-miR-4268 0 1 0
chr2:27087014|27087256 hsa-miR-4270 0 1 0
chr2:27087014|27087256 hsa-miR-3615 1 0 0
chr2:27087014|27087256 hsa-miR-3960 1 0 0
chr2:27087014|27087256 hsa-miR-4706 0 1 0
chr2:27087014|27087256 hsa-miR-4751 0 1 0
chr2:27087014|27087256 hsa-miR-5193 0 1 0
chr2:27087014|27087256 hsa-miR-6081 1 1 0
chr2:27087014|27087256 hsa-miR-6090 1 0 0
chr2:27087014|27087256 hsa-miR-6749-3p 1 1 0
chr2:27087014|27087256 hsa-miR-18a-3p 0 1 0
chr2:27087014|27087256 hsa-miR-6836-3p 1 0 0
chr2:27087014|27087256 hsa-miR-6894-5p 0 1 0
chr2:27087014|27087256 hsa-miR-6510-5p 0 1 0
chr2:27087014|27087256 hsa-miR-6089 1 0 0
chr2:27087014|27087256 hsa-miR-1301-3p 1 0 0
chr2:27087014|27087256 hsa-miR-6875-3p 1 0 0
chr2:27087014|27087256 hsa-miR-23b-5p 0 1 0
chr2:27087014|27087256 hsa-miR-6787-3p 1 1 0
chr2:27087014|27087256 hsa-miR-6716-5p 1 0 0
chr2:27087014|27087256 hsa-miR-6827-5p 0 1 0
chr2:27087014|27087256 hsa-miR-6782-5p 1 1 0
chr2:27087014|27087256 hsa-miR-6765-3p 1 0 0
chr2:27087014|27087256 hsa-miR-6821-5p 1 0 0
chr2:27087014|27087256 hsa-miR-6882-3p 1 0 0
chr2:27087014|27087256 hsa-miR-6853-5p 0 1 0
chr2:27087014|27087256 hsa-miR-4763-5p 1 0 0
chr2:27087014|27087256 hsa-miR-6763-3p 1 0 0
chr2:27087014|27087256 hsa-miR-7108-3p 0 1 0
chr2:27087014|27087256 hsa-miR-4707-3p 1 1 0
chr2:27087014|27087256 hsa-miR-4786-3p 1 0 0
chr2:27087014|27087256 hsa-miR-5001-3p 1 1 0
chr2:27087014|27087256 hsa-miR-7113-3p 1 0 0
chr2:27087014|27087256 hsa-miR-4671-5p 0 1 0
chr2:27087014|27087256 hsa-miR-4783-5p 1 0 0
chr2:27087014|27087256 hsa-miR-7111-3p 1 0 0
chr2:27087014|27087256 hsa-miR-7112-5p 1 0 0
chr2:27087014|27087256 hsa-miR-7160-3p 0 1 0
chr2:27087014|27087256 hsa-miR-1236-3p 1 0 0
chr2:27087014|27087256 hsa-miR-3158-3p 0 1 0
chr2:27087014|27087256 hsa-miR-6752-3p 1 0 0
chr2:27087014|27087256 hsa-miR-7113-5p 0 1 0
chr2:27087014|27087256 hsa-miR-5189-3p 0 1 0
chr2:27087014|27087256 hsa-miR-6779-3p 0 1 0
chr2:27087014|27087256 hsa-miR-133a-3p 0 1 0
chr2:27087014|27087256 hsa-miR-4763-3p 1 0 0
chr2:27087014|27087256 hsa-miR-6752-5p 1 0 0
chr2:27087014|27087256 hsa-miR-7110-5p 1 1 0
chr2:27087014|27087256 hsa-miR-6836-5p 1 1 0
chr2:27087014|27087256 hsa-miR-328-5p 1 0 0
chr2:27087014|27087256 hsa-miR-4745-3p 1 0 0
chr2:27087014|27087256 hsa-miR-6777-5p 1 1 0
chr2:27087014|27087256 hsa-miR-6856-5p 1 0 0
chr2:27087014|27087256 hsa-miR-6822-5p 0 1 0
chr2:27087014|27087256 hsa-miR-6792-3p 1 1 0
chr2:27087014|27087256 hsa-miR-6805-3p 0 1 0
chr2:27087014|27087256 hsa-miR-6810-3p 1 0 0
chr2:27087014|27087256 hsa-miR-3059-5p 1 0 0
chr2:27087014|27087256 hsa-miR-330-5p 1 0 0
chr2:27087014|27087256 hsa-miR-6744-3p 0 1 0
chr2:27087014|27087256 hsa-miR-4691-5p 1 1 0
chr2:27087014|27087256 hsa-miR-6781-3p 0 1 0
chr2:27087014|27087256 hsa-miR-6733-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr2:27087014|27087256
ORF Type ORF1
Protein Length 58
Nucleotide Length 174
Protein Sequence MLLSFPAPLAAAGGSLEEELPRGGGARAAGSGDTILLDKRQRPGGTPSAGRAGSSGSS
Nucleotide Sequence CTGCTCCTTTCGTTCCCTGCACCCCTGGCCGCTGCAGGTGGCTCCCTGGAGGAGGAGCTCCCACGCGGAGGAGGAGCCAGGGCAGCTGGGAGCGGGGACACCATCCTCCTGGATAAGAGGCAGAGGCCGGGAGGAACCCCGTCAGCCGGGCGGGCAGGAAGCTCTGGGAGTAGC

CircID chr2:27087014|27087256
ORF Type ORF2
Protein Length 52
Nucleotide Length 156
Protein Sequence MHPWPLQVAPWRRSSHAEEEPGQLGAGTPSSWIRGRGREEPRQPGGQEALGV
Nucleotide Sequence CTGCACCCCTGGCCGCTGCAGGTGGCTCCCTGGAGGAGGAGCTCCCACGCGGAGGAGGAGCCAGGGCAGCTGGGAGCGGGGACACCATCCTCCTGGATAAGAGGCAGAGGCCGGGAGGAACCCCGTCAGCCGGGCGGGCAGGAAGCTCTGGGAGTA

CircID chr2:27087014|27087256
ORF Type ORF3
Protein Length 54
Nucleotide Length 165
Protein Sequence MAFLDPLGSSGVARKGPAPFVPCTPGRCRWLPGGGAPTRRRSQGSWERGHHPPG
Nucleotide Sequence TTGGCTTTCCTAGACCCGCTCGGGTCTTCGGGTGTCGCGAGGAAGGGCCCTGCTCCTTTCGTTCCCTGCACCCCTGGCCGCTGCAGGTGGCTCCCTGGAGGAGGAGCTCCCACGCGGAGGAGGAGCCAGGGCAGCTGGGAGCGGGGACACCATCCTCCTGGATAA

CircID chr2:27087014|27087256
ORF Type ORF4
Protein Length 64
Nucleotide Length 192
Protein Sequence MPLIQEDGVPAPSCPGSSSAWELLLQGATCSGQGCRERKEQGPSSRHPKTRAGLGKPTQRSWSP
Nucleotide Sequence CTGCCTCTTATCCAGGAGGATGGTGTCCCCGCTCCCAGCTGCCCTGGCTCCTCCTCCGCGTGGGAGCTCCTCCTCCAGGGAGCCACCTGCAGCGGCCAGGGGTGCAGGGAACGAAAGGAGCAGGGCCCTTCCTCGCGACACCCGAAGACCCGAGCGGGTCTAGGAAAGCCAACCCAGAGGTCTTGGTCCCCG

CircID chr2:27087014|27087256
ORF Type ORF5
Protein Length 47
Nucleotide Length 144
Protein Sequence MVSPLPAALAPPPRGSSSSREPPAAARGAGNERSRALPRDTRRPERV
Nucleotide Sequence ATGGTGTCCCCGCTCCCAGCTGCCCTGGCTCCTCCTCCGCGTGGGAGCTCCTCCTCCAGGGAGCCACCTGCAGCGGCCAGGGGTGCAGGGAACGAAAGGAGCAGGGCCCTTCCTCGCGACACCCGAAGACCCGAGCGGGTCTAG

CircID chr2:27087014|27087256
ORF Type ORF6
Protein Length 75
Nucleotide Length 225
Protein Sequence MPARLTGFLPASASYPGGWCPRSQLPWLLLRVGAPPPGSHLQRPGVQGTKGAGPFLATPEDPSGSRKANPEVLVP
Nucleotide Sequence CTGCCCGCCCGGCTGACGGGGTTCCTCCCGGCCTCTGCCTCTTATCCAGGAGGATGGTGTCCCCGCTCCCAGCTGCCCTGGCTCCTCCTCCGCGTGGGAGCTCCTCCTCCAGGGAGCCACCTGCAGCGGCCAGGGGTGCAGGGAACGAAAGGAGCAGGGCCCTTCCTCGCGACACCCGAAGACCCGAGCGGGTCTAGGAAAGCCAACCCAGAGGTCTTGGTCCCC

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites