CircRNA Information

General Information
circRNA Basic Information
CircID chr2:27376496|27376831
Strand -
CircType exon
Host Gene ENSG00000115234.9;
Algorism CIRI2;
Sequence CCGGGAGTCTATGGTCAAACTCTCAGTGAGTTCCAGCGTTGGTGAGGTTGCTGTTTGTTGGGGGATCTTGCACGCCCAAGATCTCTGACCCCACCCTGCCTTTGTTACAGAGTAAGCTGAGTGCCGTGAGCTTGCGGGGAATTGGCAGTCCCAGCACAGATGCCAGTGCCAGTGATGTCCACGGCAATTTCGCCTTCGAGGGCATTGGAGATGAGGATCTGTAATCTCCACTGCTTGGATGTCTGCCCTCTACCCCAGAGGAATTTACAGAAACTTGCCCTGTGCCTGTGTCCCCCATGCTAGGGGCGGAGGGGTCTTTTCCTTCTTCTTTCCTAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr2:27376496|27376831 hsa-miR-326 0 0 1
chr2:27376496|27376831 hsa-miR-495-5p 0 0 1
chr2:27376496|27376831 hsa-miR-495-3p 0 0 1
chr2:27376496|27376831 hsa-miR-585-5p 0 0 1
chr2:27376496|27376831 hsa-miR-585-3p 0 0 1
chr2:27376496|27376831 hsa-miR-591 0 0 1
chr2:27376496|27376831 hsa-miR-620 0 0 1
chr2:27376496|27376831 hsa-miR-625-5p 0 0 1
chr2:27376496|27376831 hsa-miR-625-3p 0 0 1
chr2:27376496|27376831 hsa-miR-635 0 0 1
chr2:27376496|27376831 hsa-miR-637 0 0 1
chr2:27376496|27376831 hsa-miR-940 0 0 1
chr2:27376496|27376831 hsa-miR-1270 0 0 1
chr2:27376496|27376831 hsa-miR-1275 0 0 1
chr2:27376496|27376831 hsa-miR-1288-5p 0 0 1
chr2:27376496|27376831 hsa-miR-1288-3p 0 0 1
chr2:27376496|27376831 hsa-miR-1252-5p 0 0 1
chr2:27376496|27376831 hsa-miR-1252-3p 0 0 1
chr2:27376496|27376831 hsa-miR-512-5p 0 0 1
chr2:27376496|27376831 hsa-miR-615-5p 0 0 1
chr2:27376496|27376831 hsa-miR-361-3p 0 0 1
chr2:27376496|27376831 hsa-miR-1207-5p 0 1 1
chr2:27376496|27376831 hsa-miR-330-5p 0 0 1
chr2:27376496|27376831 hsa-miR-515-5p 0 0 1
chr2:27376496|27376831 hsa-miR-220c 0 0 1
chr2:27376496|27376831 hsa-miR-1268 0 0 1
chr2:27376496|27376831 hsa-miR-194 0 0 1
chr2:27376496|27376831 hsa-miR-499-3p 0 0 1
chr2:27376496|27376831 hsa-miR-365 0 0 1
chr2:27376496|27376831 hsa-miR-608 1 1 0
chr2:27376496|27376831 hsa-miR-1470 0 1 0
chr2:27376496|27376831 hsa-miR-3132 0 1 0
chr2:27376496|27376831 hsa-miR-3185 0 1 0
chr2:27376496|27376831 hsa-miR-4298 1 0 0
chr2:27376496|27376831 hsa-miR-4269 1 1 0
chr2:27376496|27376831 hsa-miR-3916 0 1 0
chr2:27376496|27376831 hsa-miR-4440 0 1 0
chr2:27376496|27376831 hsa-miR-4476 1 0 0
chr2:27376496|27376831 hsa-miR-4644 0 1 0
chr2:27376496|27376831 hsa-miR-4651 1 0 0
chr2:27376496|27376831 hsa-miR-4692 0 1 0
chr2:27376496|27376831 hsa-miR-4739 0 1 0
chr2:27376496|27376831 hsa-miR-5572 0 1 0
chr2:27376496|27376831 hsa-miR-6072 0 1 0
chr2:27376496|27376831 hsa-miR-8089 1 0 0
chr2:27376496|27376831 hsa-miR-150-3p 1 0 0
chr2:27376496|27376831 hsa-miR-7155-5p 1 1 0
chr2:27376496|27376831 hsa-miR-192-3p 0 1 0
chr2:27376496|27376831 hsa-miR-3622a-5p 1 0 0
chr2:27376496|27376831 hsa-miR-6089 1 0 0
chr2:27376496|27376831 hsa-miR-6890-5p 1 0 0
chr2:27376496|27376831 hsa-miR-3622b-5p 1 0 0
chr2:27376496|27376831 hsa-miR-197-5p 1 1 0
chr2:27376496|27376831 hsa-miR-7845-5p 1 0 0
chr2:27376496|27376831 hsa-miR-6768-5p 1 1 0
chr2:27376496|27376831 hsa-miR-6796-5p 0 1 0
chr2:27376496|27376831 hsa-miR-3190-3p 1 0 0
chr2:27376496|27376831 hsa-miR-6782-5p 1 0 0
chr2:27376496|27376831 hsa-miR-6786-5p 1 0 0
chr2:27376496|27376831 hsa-miR-7161-3p 0 1 0
chr2:27376496|27376831 hsa-miR-6821-3p 1 1 0
chr2:27376496|27376831 hsa-miR-3616-3p 0 1 0
chr2:27376496|27376831 hsa-miR-6781-5p 1 0 0
chr2:27376496|27376831 hsa-miR-3065-5p 1 1 0
chr2:27376496|27376831 hsa-miR-6846-3p 0 1 0
chr2:27376496|27376831 hsa-miR-4763-3p 1 1 0
chr2:27376496|27376831 hsa-miR-6812-5p 1 0 0
chr2:27376496|27376831 hsa-miR-6893-5p 0 1 0
chr2:27376496|27376831 hsa-miR-6775-5p 1 0 0
chr2:27376496|27376831 hsa-miR-6737-5p 1 0 0
chr2:27376496|27376831 hsa-miR-6743-5p 1 0 0
chr2:27376496|27376831 hsa-miR-6756-5p 1 1 0
chr2:27376496|27376831 hsa-miR-6803-5p 1 0 0
chr2:27376496|27376831 hsa-miR-6819-5p 1 1 0
chr2:27376496|27376831 hsa-miR-6774-5p 0 1 0
chr2:27376496|27376831 hsa-miR-6808-5p 0 1 0
chr2:27376496|27376831 hsa-miR-6879-5p 0 1 0
chr2:27376496|27376831 hsa-miR-7111-5p 1 0 0
chr2:27376496|27376831 hsa-miR-4728-5p 1 0 0
chr2:27376496|27376831 hsa-miR-328-5p 1 0 0
chr2:27376496|27376831 hsa-miR-4632-5p 0 1 0
chr2:27376496|27376831 hsa-miR-6735-5p 0 1 0
chr2:27376496|27376831 hsa-miR-6794-5p 1 0 0
chr2:27376496|27376831 hsa-miR-6795-5p 1 0 0
chr2:27376496|27376831 hsa-miR-4436b-3p 0 1 0
chr2:27376496|27376831 hsa-miR-6885-5p 1 1 0
chr2:27376496|27376831 hsa-miR-3199 0 1 0
chr2:27376496|27376831 hsa-miR-6739-5p 0 1 0
chr2:27376496|27376831 hsa-miR-4665-5p 1 1 0
chr2:27376496|27376831 hsa-miR-6855-5p 1 0 0
chr2:27376496|27376831 hsa-miR-6766-5p 0 1 0
chr2:27376496|27376831 hsa-miR-4667-5p 1 0 0
chr2:27376496|27376831 hsa-miR-6791-5p 1 0 0
chr2:27376496|27376831 hsa-miR-9851-5p 1 0 0
chr2:27376496|27376831 hsa-miR-6529-5p 0 1 0
chr2:27376496|27376831 hsa-miR-6891-3p 0 1 0
chr2:27376496|27376831 hsa-miR-6715b-5p 0 1 0
chr2:27376496|27376831 hsa-miR-5588-5p 0 1 0
chr2:27376496|27376831 hsa-miR-499a-3p 0 1 0
chr2:27376496|27376831 hsa-miR-5582-5p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr2:27376496|27376831
ORF Type ORF1
Protein Length 53
Nucleotide Length 162
Protein Sequence MAVPAQMPVPVMSTAISPSRALEMRICNLHCLDVCPLPQRNLQKLALCLCPPC
Nucleotide Sequence TTGGCAGTCCCAGCACAGATGCCAGTGCCAGTGATGTCCACGGCAATTTCGCCTTCGAGGGCATTGGAGATGAGGATCTGTAATCTCCACTGCTTGGATGTCTGCCCTCTACCCCAGAGGAATTTACAGAAACTTGCCCTGTGCCTGTGTCCCCCATGCTAG
CircID chr2:27376496|27376831
ORF Type ORF2
Protein Length 25
Nucleotide Length 78
Protein Sequence MVKLSVSSSVGEVAVCWGILHAQDL
Nucleotide Sequence ATGGTCAAACTCTCAGTGAGTTCCAGCGTTGGTGAGGTTGCTGTTTGTTGGGGGATCTTGCACGCCCAAGATCTCTGA
CircID chr2:27376496|27376831
ORF Type ORF3
Protein Length 32
Nucleotide Length 96
Protein Sequence MSALYPRGIYRNLPCACVPHARGGGVFSFFFP
Nucleotide Sequence ATGTCTGCCCTCTACCCCAGAGGAATTTACAGAAACTTGCCCTGTGCCTGTGTCCCCCATGCTAGGGGCGGAGGGGTCTTTTCCTTCTTCTTTCCT
CircID chr2:27376496|27376831
ORF Type ORF4
Protein Length 61
Nucleotide Length 186
Protein Sequence MVRLLFVGGSCTPKISDPTLPLLQSKLSAVSLRGIGSPSTDASASDVHGNFAFEGIGDEDL
Nucleotide Sequence TTGGTGAGGTTGCTGTTTGTTGGGGGATCTTGCACGCCCAAGATCTCTGACCCCACCCTGCCTTTGTTACAGAGTAAGCTGAGTGCCGTGAGCTTGCGGGGAATTGGCAGTCCCAGCACAGATGCCAGTGCCAGTGATGTCCACGGCAATTTCGCCTTCGAGGGCATTGGAGATGAGGATCTGTAA
CircID chr2:27376496|27376831
ORF Type ORF5
Protein Length 35
Nucleotide Length 105
Protein Sequence MLGCLPSTPEEFTETCPVPVSPMLGAEGSFPSSFL
Nucleotide Sequence CTGCTTGGATGTCTGCCCTCTACCCCAGAGGAATTTACAGAAACTTGCCCTGTGCCTGTGTCCCCCATGCTAGGGGCGGAGGGGTCTTTTCCTTCTTCTTTCCTA
CircID chr2:27376496|27376831
ORF Type ORF6
Protein Length 53
Nucleotide Length 159
Protein Sequence MCWDCQFPASSRHSAYSVTKAGWGQRSWACKIPQQTATSPTLELTESLTIDSR
Nucleotide Sequence CTGTGCTGGGACTGCCAATTCCCCGCAAGCTCACGGCACTCAGCTTACTCTGTAACAAAGGCAGGGTGGGGTCAGAGATCTTGGGCGTGCAAGATCCCCCAACAAACAGCAACCTCACCAACGCTGGAACTCACTGAGAGTTTGACCATAGACTCCCGG
CircID chr2:27376496|27376831
ORF Type ORF7
Protein Length 91
Nucleotide Length 276
Protein Sequence MGDTGTGQVSVNSSGVEGRHPSSGDYRSSSPMPSKAKLPWTSLALASVLGLPIPRKLTALSLLCNKGRVGSEILGVQDPPTNSNLTNAGTH
Nucleotide Sequence ATGGGGGACACAGGCACAGGGCAAGTTTCTGTAAATTCCTCTGGGGTAGAGGGCAGACATCCAAGCAGTGGAGATTACAGATCCTCATCTCCAATGCCCTCGAAGGCGAAATTGCCGTGGACATCACTGGCACTGGCATCTGTGCTGGGACTGCCAATTCCCCGCAAGCTCACGGCACTCAGCTTACTCTGTAACAAAGGCAGGGTGGGGTCAGAGATCTTGGGCGTGCAAGATCCCCCAACAAACAGCAACCTCACCAACGCTGGAACTCACTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab