CircRNA Information

General Information
circRNA Basic Information
CircID chr2:27433425|27433733
Strand +
CircType exon
Host Gene ENSG00000115216.12;
Algorism CIRI2;
Sequence CTTCCTCTGTATCCATGGCCAGGTATGCACTGTCAATACCTGGTACATTCCGTTGATTCACCTGAGAAGAAATTCATATGAAAGAGAATTAAACTTATCTCACAAATCCTCCATTTTAACACTCCATATGATCATCTCCTCCTAGCCCCCAACCTATTGAAGTTTGGTTGGCCTCTTTTAAGACTTTGCTCTTCCAGTTCTCACCTTTCCAGAATTCACTCACCCAAGAGTAACTGTACCATAACCTTACCTCTTCTCGCCTCTTCTGCCAGCGCCCACAGGGCGACTCTTCCAAAATCTCAGACTCAT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr2:27433425|27433733 hsa-miR-95-5p 0 0 1
chr2:27433425|27433733 hsa-miR-95-3p 0 0 1
chr2:27433425|27433733 hsa-miR-148a-5p 0 0 1
chr2:27433425|27433733 hsa-miR-148a-3p 0 0 1
chr2:27433425|27433733 hsa-miR-122-5p 0 0 1
chr2:27433425|27433733 hsa-miR-122-3p 0 0 1
chr2:27433425|27433733 hsa-miR-143-5p 0 0 1
chr2:27433425|27433733 hsa-miR-143-3p 0 0 1
chr2:27433425|27433733 hsa-miR-152-5p 0 0 1
chr2:27433425|27433733 hsa-miR-152-3p 0 0 1
chr2:27433425|27433733 hsa-miR-191-5p 0 0 1
chr2:27433425|27433733 hsa-miR-191-3p 0 0 1
chr2:27433425|27433733 hsa-miR-146a-5p 0 0 1
chr2:27433425|27433733 hsa-miR-146a-3p 0 0 1
chr2:27433425|27433733 hsa-miR-154-5p 0 0 1
chr2:27433425|27433733 hsa-miR-154-3p 0 0 1
chr2:27433425|27433733 hsa-miR-206 0 1 1
chr2:27433425|27433733 hsa-miR-148b-5p 0 0 1
chr2:27433425|27433733 hsa-miR-148b-3p 0 0 1
chr2:27433425|27433733 hsa-miR-583 0 0 1
chr2:27433425|27433733 hsa-miR-584-5p 0 0 1
chr2:27433425|27433733 hsa-miR-584-3p 0 0 1
chr2:27433425|27433733 hsa-miR-589-5p 0 0 1
chr2:27433425|27433733 hsa-miR-589-3p 0 0 1
chr2:27433425|27433733 hsa-miR-613 0 0 1
chr2:27433425|27433733 hsa-miR-619-5p 0 0 1
chr2:27433425|27433733 hsa-miR-619-3p 0 0 1
chr2:27433425|27433733 hsa-miR-627-5p 0 0 1
chr2:27433425|27433733 hsa-miR-627-3p 0 0 1
chr2:27433425|27433733 hsa-miR-635 0 0 1
chr2:27433425|27433733 hsa-miR-758-5p 0 0 1
chr2:27433425|27433733 hsa-miR-758-3p 0 0 1
chr2:27433425|27433733 hsa-miR-1264 0 0 1
chr2:27433425|27433733 hsa-miR-765 1 0 1
chr2:27433425|27433733 hsa-miR-298 1 1 1
chr2:27433425|27433733 hsa-miR-924 0 0 1
chr2:27433425|27433733 hsa-miR-935 0 0 1
chr2:27433425|27433733 hsa-miR-942-5p 0 0 1
chr2:27433425|27433733 hsa-miR-942-3p 0 0 1
chr2:27433425|27433733 hsa-miR-1299 0 0 1
chr2:27433425|27433733 hsa-miR-1249-5p 0 0 1
chr2:27433425|27433733 hsa-miR-1249-3p 0 0 1
chr2:27433425|27433733 hsa-miR-1253 0 0 1
chr2:27433425|27433733 hsa-miR-1262 1 1 1
chr2:27433425|27433733 hsa-miR-1266-5p 0 0 1
chr2:27433425|27433733 hsa-miR-1266-3p 0 0 1
chr2:27433425|27433733 hsa-miR-1275 0 0 1
chr2:27433425|27433733 hsa-miR-125a-3p 1 0 1
chr2:27433425|27433733 hsa-miR-146b-3p 0 1 1
chr2:27433425|27433733 hsa-miR-490-5p 0 1 1
chr2:27433425|27433733 hsa-miR-582-5p 0 0 1
chr2:27433425|27433733 hsa-miR-875-3p 0 0 1
chr2:27433425|27433733 hsa-miR-146b-5p 0 0 1
chr2:27433425|27433733 hsa-miR-7 0 0 1
chr2:27433425|27433733 hsa-miR-1 0 0 1
chr2:27433425|27433733 hsa-miR-516b 0 0 1
chr2:27433425|27433733 hsa-miR-762 1 0 0
chr2:27433425|27433733 hsa-miR-936 1 0 0
chr2:27433425|27433733 hsa-miR-1268a 1 0 0
chr2:27433425|27433733 hsa-miR-3125 1 0 0
chr2:27433425|27433733 hsa-miR-3131 1 0 0
chr2:27433425|27433733 hsa-miR-3147 1 0 0
chr2:27433425|27433733 hsa-miR-3154 1 0 0
chr2:27433425|27433733 hsa-miR-3197 1 0 0
chr2:27433425|27433733 hsa-miR-4296 0 1 0
chr2:27433425|27433733 hsa-miR-4257 1 0 0
chr2:27433425|27433733 hsa-miR-4271 1 0 0
chr2:27433425|27433733 hsa-miR-3652 1 0 0
chr2:27433425|27433733 hsa-miR-3911 1 0 0
chr2:27433425|27433733 hsa-miR-3936 1 0 0
chr2:27433425|27433733 hsa-miR-1268b 1 0 0
chr2:27433425|27433733 hsa-miR-4430 1 0 0
chr2:27433425|27433733 hsa-miR-4436a 1 0 0
chr2:27433425|27433733 hsa-miR-4450 1 0 0
chr2:27433425|27433733 hsa-miR-4466 1 0 0
chr2:27433425|27433733 hsa-miR-3689c 1 0 0
chr2:27433425|27433733 hsa-miR-4487 1 0 0
chr2:27433425|27433733 hsa-miR-4489 0 1 0
chr2:27433425|27433733 hsa-miR-4498 1 0 0
chr2:27433425|27433733 hsa-miR-2392 1 0 0
chr2:27433425|27433733 hsa-miR-4507 1 0 0
chr2:27433425|27433733 hsa-miR-1587 1 0 0
chr2:27433425|27433733 hsa-miR-4651 1 0 0
chr2:27433425|27433733 hsa-miR-4654 1 0 0
chr2:27433425|27433733 hsa-miR-4658 1 1 0
chr2:27433425|27433733 hsa-miR-4689 1 0 0
chr2:27433425|27433733 hsa-miR-4706 1 0 0
chr2:27433425|27433733 hsa-miR-4734 1 0 0
chr2:27433425|27433733 hsa-miR-4739 1 0 0
chr2:27433425|27433733 hsa-miR-4784 1 1 0
chr2:27433425|27433733 hsa-miR-5192 1 0 0
chr2:27433425|27433733 hsa-miR-5698 1 0 0
chr2:27433425|27433733 hsa-miR-5787 1 0 0
chr2:27433425|27433733 hsa-miR-6077 1 0 0
chr2:27433425|27433733 hsa-miR-6086 1 0 0
chr2:27433425|27433733 hsa-miR-6124 1 0 0
chr2:27433425|27433733 hsa-miR-6165 1 0 0
chr2:27433425|27433733 hsa-miR-7150 1 0 0
chr2:27433425|27433733 hsa-miR-8072 1 0 0
chr2:27433425|27433733 hsa-miR-8073 1 0 0
chr2:27433425|27433733 hsa-miR-8085 1 0 0
chr2:27433425|27433733 hsa-miR-12118 1 0 0
chr2:27433425|27433733 hsa-miR-150-3p 0 1 0
chr2:27433425|27433733 hsa-miR-4433b-3p 1 0 0
chr2:27433425|27433733 hsa-miR-6734-5p 1 0 0
chr2:27433425|27433733 hsa-miR-4433a-3p 1 0 0
chr2:27433425|27433733 hsa-miR-6861-5p 1 0 0
chr2:27433425|27433733 hsa-miR-7106-5p 1 1 0
chr2:27433425|27433733 hsa-miR-6894-5p 1 1 0
chr2:27433425|27433733 hsa-miR-6510-5p 1 0 0
chr2:27433425|27433733 hsa-miR-6728-5p 1 0 0
chr2:27433425|27433733 hsa-miR-1236-5p 1 0 0
chr2:27433425|27433733 hsa-miR-7851-3p 1 0 0
chr2:27433425|27433733 hsa-miR-5187-5p 1 0 0
chr2:27433425|27433733 hsa-miR-6089 1 0 0
chr2:27433425|27433733 hsa-miR-3192-5p 1 0 0
chr2:27433425|27433733 hsa-miR-7847-3p 1 0 0
chr2:27433425|27433733 hsa-miR-4695-5p 1 0 0
chr2:27433425|27433733 hsa-miR-4709-3p 1 0 0
chr2:27433425|27433733 hsa-miR-4722-5p 1 0 0
chr2:27433425|27433733 hsa-miR-6730-5p 1 1 0
chr2:27433425|27433733 hsa-miR-7154-3p 1 0 0
chr2:27433425|27433733 hsa-miR-6741-5p 1 1 0
chr2:27433425|27433733 hsa-miR-6759-5p 1 1 0
chr2:27433425|27433733 hsa-miR-3187-3p 0 1 0
chr2:27433425|27433733 hsa-miR-197-5p 1 0 0
chr2:27433425|27433733 hsa-miR-6726-3p 0 1 0
chr2:27433425|27433733 hsa-miR-6748-5p 1 0 0
chr2:27433425|27433733 hsa-miR-6793-5p 1 0 0
chr2:27433425|27433733 hsa-miR-6796-5p 1 0 0
chr2:27433425|27433733 hsa-miR-6805-5p 1 0 0
chr2:27433425|27433733 hsa-miR-1224-5p 1 0 0
chr2:27433425|27433733 hsa-miR-6881-5p 1 0 0
chr2:27433425|27433733 hsa-miR-2467-3p 1 0 0
chr2:27433425|27433733 hsa-miR-3150b-3p 1 1 0
chr2:27433425|27433733 hsa-miR-7109-5p 1 0 0
chr2:27433425|27433733 hsa-miR-1229-5p 1 0 0
chr2:27433425|27433733 hsa-miR-885-3p 1 0 0
chr2:27433425|27433733 hsa-miR-1908-5p 1 0 0
chr2:27433425|27433733 hsa-miR-1228-5p 1 0 0
chr2:27433425|27433733 hsa-miR-296-3p 1 0 0
chr2:27433425|27433733 hsa-miR-4650-3p 1 0 0
chr2:27433425|27433733 hsa-miR-4690-5p 1 0 0
chr2:27433425|27433733 hsa-miR-3677-3p 1 0 0
chr2:27433425|27433733 hsa-miR-877-5p 1 0 0
chr2:27433425|27433733 hsa-miR-6847-5p 1 0 0
chr2:27433425|27433733 hsa-miR-3202 1 1 0
chr2:27433425|27433733 hsa-miR-937-5p 1 0 0
chr2:27433425|27433733 hsa-miR-3925-5p 1 0 0
chr2:27433425|27433733 hsa-miR-6802-5p 1 0 0
chr2:27433425|27433733 hsa-miR-664b-5p 1 1 0
chr2:27433425|27433733 hsa-miR-1250-5p 1 0 0
chr2:27433425|27433733 hsa-let-7e-5p 1 0 0
chr2:27433425|27433733 hsa-miR-6826-5p 0 1 0
chr2:27433425|27433733 hsa-let-7a-5p 1 0 0
chr2:27433425|27433733 hsa-miR-6868-5p 0 1 0
chr2:27433425|27433733 hsa-miR-483-5p 1 0 0
chr2:27433425|27433733 hsa-miR-3179 1 0 0
chr2:27433425|27433733 hsa-miR-3152-3p 0 1 0
chr2:27433425|27433733 hsa-miR-1207-5p 1 0 0
chr2:27433425|27433733 hsa-miR-3689b-3p 1 0 0
chr2:27433425|27433733 hsa-miR-6769b-5p 1 0 0
chr2:27433425|27433733 hsa-miR-6812-5p 1 0 0
chr2:27433425|27433733 hsa-miR-6870-5p 1 0 0
chr2:27433425|27433733 hsa-miR-6752-5p 1 0 0
chr2:27433425|27433733 hsa-miR-6754-5p 1 0 0
chr2:27433425|27433733 hsa-miR-6756-5p 1 0 0
chr2:27433425|27433733 hsa-miR-6769a-5p 1 0 0
chr2:27433425|27433733 hsa-miR-6803-5p 1 0 0
chr2:27433425|27433733 hsa-miR-6815-5p 1 0 0
chr2:27433425|27433733 hsa-miR-6819-5p 1 0 0
chr2:27433425|27433733 hsa-miR-7110-5p 1 0 0
chr2:27433425|27433733 hsa-miR-11181-3p 1 1 0
chr2:27433425|27433733 hsa-miR-6722-3p 1 0 0
chr2:27433425|27433733 hsa-miR-6751-5p 1 0 0
chr2:27433425|27433733 hsa-miR-6779-5p 1 0 0
chr2:27433425|27433733 hsa-miR-6780a-5p 1 0 0
chr2:27433425|27433733 hsa-miR-6788-5p 1 0 0
chr2:27433425|27433733 hsa-miR-6797-5p 1 0 0
chr2:27433425|27433733 hsa-miR-3620-5p 1 0 0
chr2:27433425|27433733 hsa-miR-5196-5p 1 0 0
chr2:27433425|27433733 hsa-miR-6780b-5p 1 0 0
chr2:27433425|27433733 hsa-miR-328-5p 0 1 0
chr2:27433425|27433733 hsa-miR-3689a-3p 1 0 0
chr2:27433425|27433733 hsa-miR-4649-5p 1 0 0
chr2:27433425|27433733 hsa-miR-4701-3p 1 1 0
chr2:27433425|27433733 hsa-miR-4726-5p 1 0 0
chr2:27433425|27433733 hsa-miR-6729-5p 1 0 0
chr2:27433425|27433733 hsa-miR-6794-5p 1 0 0
chr2:27433425|27433733 hsa-miR-6846-5p 1 1 0
chr2:27433425|27433733 hsa-miR-6848-5p 1 1 0
chr2:27433425|27433733 hsa-miR-6858-5p 1 0 0
chr2:27433425|27433733 hsa-miR-6883-5p 1 0 0
chr2:27433425|27433733 hsa-miR-4723-5p 1 0 0
chr2:27433425|27433733 hsa-miR-939-5p 1 0 0
chr2:27433425|27433733 hsa-miR-4758-5p 1 0 0
chr2:27433425|27433733 hsa-miR-10394-3p 1 0 0
chr2:27433425|27433733 hsa-miR-1910-3p 1 0 0
chr2:27433425|27433733 hsa-miR-6511a-5p 1 0 0
chr2:27433425|27433733 hsa-miR-6511b-5p 1 0 0
chr2:27433425|27433733 hsa-miR-3198 1 0 0
chr2:27433425|27433733 hsa-miR-3940-5p 1 0 0
chr2:27433425|27433733 hsa-miR-6731-5p 1 1 0
chr2:27433425|27433733 hsa-miR-6856-5p 1 0 0
chr2:27433425|27433733 hsa-miR-6736-5p 1 1 0
chr2:27433425|27433733 hsa-miR-4646-5p 1 0 0
chr2:27433425|27433733 hsa-miR-4747-5p 1 0 0
chr2:27433425|27433733 hsa-miR-4716-3p 1 0 0
chr2:27433425|27433733 hsa-miR-6766-5p 1 0 0
chr2:27433425|27433733 hsa-miR-6790-5p 1 0 0
chr2:27433425|27433733 hsa-miR-6849-5p 1 0 0
chr2:27433425|27433733 hsa-miR-9851-5p 1 1 0
chr2:27433425|27433733 hsa-miR-1255b-5p 1 0 0
chr2:27433425|27433733 hsa-miR-4659b-3p 0 1 0
chr2:27433425|27433733 hsa-miR-876-5p 0 1 0
chr2:27433425|27433733 hsa-miR-4659a-3p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr2:27433425|27433733
ORF Type ORF1
Protein Length 51
Nucleotide Length 153
Protein Sequence MKFGWPLLRLCSSSSHLSRIHSPKSNCTITLPLLASSASAHRATLPKSQTH
Nucleotide Sequence TTGAAGTTTGGTTGGCCTCTTTTAAGACTTTGCTCTTCCAGTTCTCACCTTTCCAGAATTCACTCACCCAAGAGTAACTGTACCATAACCTTACCTCTTCTCGCCTCTTCTGCCAGCGCCCACAGGGCGACTCTTCCAAAATCTCAGACTCAT
CircID chr2:27433425|27433733
ORF Type ORF2
Protein Length 30
Nucleotide Length 93
Protein Sequence MIHLRRNSYERELNLSHKSSILTLHMIISS
Nucleotide Sequence TTGATTCACCTGAGAAGAAATTCATATGAAAGAGAATTAAACTTATCTCACAAATCCTCCATTTTAACACTCCATATGATCATCTCCTCCTAG
CircID chr2:27433425|27433733
ORF Type ORF3
Protein Length 25
Nucleotide Length 75
Protein Sequence MYHNLTSSRLFCQRPQGDSSKISDS
Nucleotide Sequence CTGTACCATAACCTTACCTCTTCTCGCCTCTTCTGCCAGCGCCCACAGGGCGACTCTTCCAAAATCTCAGACTCA
CircID chr2:27433425|27433733
ORF Type ORF4
Protein Length 59
Nucleotide Length 180
Protein Sequence MEESPCGRWQKRREEVRLWYSYSWVSEFWKGENWKSKVLKEANQTSIGWGLGGDDHMEC
Nucleotide Sequence TTGGAAGAGTCGCCCTGTGGGCGCTGGCAGAAGAGGCGAGAAGAGGTAAGGTTATGGTACAGTTACTCTTGGGTGAGTGAATTCTGGAAAGGTGAGAACTGGAAGAGCAAAGTCTTAAAAGAGGCCAACCAAACTTCAATAGGTTGGGGGCTAGGAGGAGATGATCATATGGAGTGTTAA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab