CircRNA Information

General Information
circRNA Basic Information
CircID chr2:27440496|27440878
Strand -
CircType exon
Host Gene ENSG00000115216.12;
Algorism CIRI2;
Sequence CAGTTCAGACTTTGTGAGTAACTGAGAGGGTCTGAAAGGGGCAGATTGGTCACGACCACTCTTGAGGCTCTGTAAACTGTCCATTCTCTGGGAATGCTTGAATTTGCTATTTTGCTTGTTTCTTTCCTTCCATCTCCTTTCTCTTTTCTCGTCCAGGTACTCTCAGTCACCAGCTCTGGAATTAGATAAATTCCTTGAAGATGTCAGGTGAGAGCAGAGTGAGAAGCAGGCTTTCTTGAGGAAGCAGGCGGGGTTGGGTATCCTAAGGCGTTCACAGAGCCCATGTGACCTGTCTTCATCTCCCTCCAGGAATGGGATCTATCCTCTGACAGCCTTTGGGCTGCCTCGGCCCCAGCAGCCACAGCAGGAGGAGGTGACATCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr2:27440496|27440878 hsa-miR-143-5p 0 0 1
chr2:27440496|27440878 hsa-miR-143-3p 0 0 1
chr2:27440496|27440878 hsa-miR-134-5p 0 0 1
chr2:27440496|27440878 hsa-miR-134-3p 0 0 1
chr2:27440496|27440878 hsa-miR-370-5p 0 0 1
chr2:27440496|27440878 hsa-miR-370-3p 0 0 1
chr2:27440496|27440878 hsa-miR-335-5p 0 0 1
chr2:27440496|27440878 hsa-miR-335-3p 0 0 1
chr2:27440496|27440878 hsa-miR-489-5p 0 0 1
chr2:27440496|27440878 hsa-miR-489-3p 0 0 1
chr2:27440496|27440878 hsa-miR-498-5p 0 0 1
chr2:27440496|27440878 hsa-miR-498-3p 0 0 1
chr2:27440496|27440878 hsa-miR-596 0 0 1
chr2:27440496|27440878 hsa-miR-604 0 0 1
chr2:27440496|27440878 hsa-miR-614 0 0 1
chr2:27440496|27440878 hsa-miR-619-5p 0 0 1
chr2:27440496|27440878 hsa-miR-619-3p 0 0 1
chr2:27440496|27440878 hsa-miR-647 0 0 1
chr2:27440496|27440878 hsa-miR-651-5p 0 0 1
chr2:27440496|27440878 hsa-miR-651-3p 0 0 1
chr2:27440496|27440878 hsa-miR-760 0 0 1
chr2:27440496|27440878 hsa-miR-935 0 0 1
chr2:27440496|27440878 hsa-miR-1179 0 0 1
chr2:27440496|27440878 hsa-miR-1229-5p 0 0 1
chr2:27440496|27440878 hsa-miR-1229-3p 0 0 1
chr2:27440496|27440878 hsa-miR-548p 0 0 1
chr2:27440496|27440878 hsa-miR-1252-5p 0 0 1
chr2:27440496|27440878 hsa-miR-1252-3p 0 0 1
chr2:27440496|27440878 hsa-miR-1827 0 0 1
chr2:27440496|27440878 hsa-miR-525-5p 0 0 1
chr2:27440496|27440878 hsa-miR-767-3p 0 0 1
chr2:27440496|27440878 hsa-miR-324-3p 0 0 1
chr2:27440496|27440878 hsa-miR-520a-5p 0 0 1
chr2:27440496|27440878 hsa-miR-516a-3p 0 0 1
chr2:27440496|27440878 hsa-miR-138 0 0 1
chr2:27440496|27440878 hsa-miR-1185 0 0 1
chr2:27440496|27440878 hsa-miR-612 1 0 0
chr2:27440496|27440878 hsa-miR-637 1 0 0
chr2:27440496|27440878 hsa-miR-762 1 0 0
chr2:27440496|27440878 hsa-miR-765 1 0 0
chr2:27440496|27440878 hsa-miR-1255a 0 1 0
chr2:27440496|27440878 hsa-miR-1976 0 1 0
chr2:27440496|27440878 hsa-miR-3138 1 0 0
chr2:27440496|27440878 hsa-miR-3153 0 1 0
chr2:27440496|27440878 hsa-miR-3154 1 1 0
chr2:27440496|27440878 hsa-miR-378c 1 0 0
chr2:27440496|27440878 hsa-miR-4299 1 1 0
chr2:27440496|27440878 hsa-miR-4257 1 0 0
chr2:27440496|27440878 hsa-miR-4428 1 1 0
chr2:27440496|27440878 hsa-miR-4439 0 1 0
chr2:27440496|27440878 hsa-miR-4458 1 0 0
chr2:27440496|27440878 hsa-miR-4476 1 0 0
chr2:27440496|27440878 hsa-miR-4510 0 1 0
chr2:27440496|27440878 hsa-miR-4512 1 0 0
chr2:27440496|27440878 hsa-miR-4533 1 0 0
chr2:27440496|27440878 hsa-miR-378i 1 0 0
chr2:27440496|27440878 hsa-miR-4642 1 0 0
chr2:27440496|27440878 hsa-miR-4644 0 1 0
chr2:27440496|27440878 hsa-miR-4656 1 0 0
chr2:27440496|27440878 hsa-miR-4674 0 1 0
chr2:27440496|27440878 hsa-miR-4688 1 0 0
chr2:27440496|27440878 hsa-miR-4689 1 0 0
chr2:27440496|27440878 hsa-miR-4706 1 0 0
chr2:27440496|27440878 hsa-miR-4736 1 1 0
chr2:27440496|27440878 hsa-miR-4739 1 0 0
chr2:27440496|27440878 hsa-miR-4741 1 0 0
chr2:27440496|27440878 hsa-miR-4779 1 0 0
chr2:27440496|27440878 hsa-miR-4784 1 0 0
chr2:27440496|27440878 hsa-miR-5685 0 1 0
chr2:27440496|27440878 hsa-miR-5787 1 0 0
chr2:27440496|27440878 hsa-miR-6085 1 0 0
chr2:27440496|27440878 hsa-miR-6088 1 1 0
chr2:27440496|27440878 hsa-miR-6124 1 1 0
chr2:27440496|27440878 hsa-miR-6133 0 1 0
chr2:27440496|27440878 hsa-miR-8085 1 0 0
chr2:27440496|27440878 hsa-miR-12125 0 1 0
chr2:27440496|27440878 hsa-miR-138-5p 0 1 0
chr2:27440496|27440878 hsa-miR-128-1-5p 1 1 0
chr2:27440496|27440878 hsa-miR-6734-5p 1 0 0
chr2:27440496|27440878 hsa-miR-3194-3p 0 1 0
chr2:27440496|27440878 hsa-miR-7106-5p 1 0 0
chr2:27440496|27440878 hsa-miR-6894-5p 1 0 0
chr2:27440496|27440878 hsa-miR-6822-3p 1 0 0
chr2:27440496|27440878 hsa-miR-4687-3p 1 1 0
chr2:27440496|27440878 hsa-miR-6799-5p 1 0 0
chr2:27440496|27440878 hsa-miR-7851-3p 1 0 0
chr2:27440496|27440878 hsa-miR-1227-5p 1 1 0
chr2:27440496|27440878 hsa-miR-7114-5p 1 0 0
chr2:27440496|27440878 hsa-miR-6515-5p 1 1 0
chr2:27440496|27440878 hsa-miR-6757-5p 1 0 0
chr2:27440496|27440878 hsa-miR-4474-3p 0 1 0
chr2:27440496|27440878 hsa-miR-432-5p 1 0 0
chr2:27440496|27440878 hsa-miR-7845-5p 1 0 0
chr2:27440496|27440878 hsa-miR-3605-5p 1 1 0
chr2:27440496|27440878 hsa-miR-6716-5p 1 0 0
chr2:27440496|27440878 hsa-miR-3180-3p 1 0 0
chr2:27440496|27440878 hsa-miR-6868-3p 0 1 0
chr2:27440496|27440878 hsa-miR-3190-3p 1 0 0
chr2:27440496|27440878 hsa-miR-6760-5p 1 1 0
chr2:27440496|27440878 hsa-miR-6728-3p 0 1 0
chr2:27440496|27440878 hsa-miR-6888-5p 1 0 0
chr2:27440496|27440878 hsa-miR-6852-5p 1 0 0
chr2:27440496|27440878 hsa-miR-7109-5p 1 0 0
chr2:27440496|27440878 hsa-miR-5001-3p 1 1 0
chr2:27440496|27440878 hsa-miR-4764-5p 1 0 0
chr2:27440496|27440878 hsa-miR-6771-5p 1 0 0
chr2:27440496|27440878 hsa-miR-3677-3p 1 0 0
chr2:27440496|27440878 hsa-miR-877-5p 1 0 0
chr2:27440496|27440878 hsa-miR-4717-3p 1 1 0
chr2:27440496|27440878 hsa-miR-3202 1 0 0
chr2:27440496|27440878 hsa-miR-3690 0 1 0
chr2:27440496|27440878 hsa-miR-149-3p 1 0 0
chr2:27440496|27440878 hsa-miR-3925-5p 1 0 0
chr2:27440496|27440878 hsa-miR-1306-5p 0 1 0
chr2:27440496|27440878 hsa-miR-6781-5p 1 0 0
chr2:27440496|27440878 hsa-miR-660-3p 0 1 0
chr2:27440496|27440878 hsa-miR-6793-3p 1 0 0
chr2:27440496|27440878 hsa-miR-6758-3p 0 1 0
chr2:27440496|27440878 hsa-miR-2114-3p 0 1 0
chr2:27440496|27440878 hsa-miR-483-5p 1 0 0
chr2:27440496|27440878 hsa-miR-6761-5p 0 1 0
chr2:27440496|27440878 hsa-miR-3173-5p 0 1 0
chr2:27440496|27440878 hsa-miR-6732-3p 0 1 0
chr2:27440496|27440878 hsa-miR-4524b-3p 0 1 0
chr2:27440496|27440878 hsa-miR-6812-5p 1 0 0
chr2:27440496|27440878 hsa-miR-6865-5p 1 0 0
chr2:27440496|27440878 hsa-miR-6803-5p 1 0 0
chr2:27440496|27440878 hsa-miR-6819-5p 1 0 0
chr2:27440496|27440878 hsa-miR-6851-5p 1 0 0
chr2:27440496|27440878 hsa-miR-1249-5p 1 1 0
chr2:27440496|27440878 hsa-miR-6780a-5p 1 1 0
chr2:27440496|27440878 hsa-miR-6797-5p 1 1 0
chr2:27440496|27440878 hsa-miR-7111-5p 1 1 0
chr2:27440496|27440878 hsa-miR-3127-3p 1 0 0
chr2:27440496|27440878 hsa-miR-3620-5p 1 0 0
chr2:27440496|27440878 hsa-miR-6780b-5p 1 0 0
chr2:27440496|27440878 hsa-miR-1909-3p 1 0 0
chr2:27440496|27440878 hsa-miR-4649-5p 1 0 0
chr2:27440496|27440878 hsa-miR-4726-5p 1 0 0
chr2:27440496|27440878 hsa-miR-6738-5p 1 0 0
chr2:27440496|27440878 hsa-miR-6795-5p 0 1 0
chr2:27440496|27440878 hsa-miR-6848-5p 1 0 0
chr2:27440496|27440878 hsa-miR-6887-5p 1 0 0
chr2:27440496|27440878 hsa-miR-939-5p 1 0 0
chr2:27440496|27440878 hsa-miR-3085-5p 1 0 0
chr2:27440496|27440878 hsa-miR-6731-5p 1 0 0
chr2:27440496|27440878 hsa-miR-6739-5p 1 0 0
chr2:27440496|27440878 hsa-miR-6758-5p 1 1 0
chr2:27440496|27440878 hsa-miR-6856-5p 1 0 0
chr2:27440496|27440878 hsa-miR-6877-3p 1 0 0
chr2:27440496|27440878 hsa-miR-10398-3p 1 0 0
chr2:27440496|27440878 hsa-miR-3173-3p 1 0 0
chr2:27440496|27440878 hsa-miR-3679-5p 1 0 0
chr2:27440496|27440878 hsa-miR-6876-5p 1 1 0
chr2:27440496|27440878 hsa-miR-6891-5p 1 0 0
chr2:27440496|27440878 hsa-miR-550a-5p 1 0 0
chr2:27440496|27440878 hsa-miR-6762-5p 1 0 0
chr2:27440496|27440878 hsa-miR-3622a-3p 0 1 0
chr2:27440496|27440878 hsa-miR-6823-3p 1 0 0
chr2:27440496|27440878 hsa-miR-6764-5p 1 1 0
chr2:27440496|27440878 hsa-miR-128-2-5p 0 1 0
chr2:27440496|27440878 hsa-miR-1255b-5p 0 1 0
chr2:27440496|27440878 hsa-miR-513c-5p 0 1 0
chr2:27440496|27440878 hsa-miR-10397-3p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr2:27440496|27440878
ORF Type ORF1
Protein Length 33
Nucleotide Length 102
Protein Sequence MGMLEFAILLVSFLPSPFSFLVQVLSVTSSGIR
Nucleotide Sequence CTGGGAATGCTTGAATTTGCTATTTTGCTTGTTTCTTTCCTTCCATCTCCTTTCTCTTTTCTCGTCCAGGTACTCTCAGTCACCAGCTCTGGAATTAGATAA
CircID chr2:27440496|27440878
ORF Type ORF2
Protein Length 59
Nucleotide Length 180
Protein Sequence MKGADWSRPLLRLCKLSILWECLNLLFCLFLSFHLLSLFSSRYSQSPALELDKFLEDVR
Nucleotide Sequence CTGAAAGGGGCAGATTGGTCACGACCACTCTTGAGGCTCTGTAAACTGTCCATTCTCTGGGAATGCTTGAATTTGCTATTTTGCTTGTTTCTTTCCTTCCATCTCCTTTCTCTTTTCTCGTCCAGGTACTCTCAGTCACCAGCTCTGGAATTAGATAAATTCCTTGAAGATGTCAGGTGA
CircID chr2:27440496|27440878
ORF Type ORF3
Protein Length 49
Nucleotide Length 147
Protein Sequence MRKQAGLGILRRSQSPCDLSSSPSRNGIYPLTAFGLPRPQQPQQEEVTS
Nucleotide Sequence TTGAGGAAGCAGGCGGGGTTGGGTATCCTAAGGCGTTCACAGAGCCCATGTGACCTGTCTTCATCTCCCTCCAGGAATGGGATCTATCCTCTGACAGCCTTTGGGCTGCCTCGGCCCCAGCAGCCACAGCAGGAGGAGGTGACATCA
CircID chr2:27440496|27440878
ORF Type ORF4
Protein Length 58
Nucleotide Length 177
Protein Sequence MSPPPAVAAGAEAAQRLSEDRSHSWREMKTGHMGSVNALGYPTPPASSRKPASHSALT
Nucleotide Sequence ATGTCACCTCCTCCTGCTGTGGCTGCTGGGGCCGAGGCAGCCCAAAGGCTGTCAGAGGATAGATCCCATTCCTGGAGGGAGATGAAGACAGGTCACATGGGCTCTGTGAACGCCTTAGGATACCCAACCCCGCCTGCTTCCTCAAGAAAGCCTGCTTCTCACTCTGCTCTCACCTGA
CircID chr2:27440496|27440878
ORF Type ORF5
Protein Length 57
Nucleotide Length 171
Protein Sequence MVTESTWTRKEKGDGRKETSKIANSSIPREWTVYRASRVVVTNLPLSDPLSYSQSLN
Nucleotide Sequence CTGGTGACTGAGAGTACCTGGACGAGAAAAGAGAAAGGAGATGGAAGGAAAGAAACAAGCAAAATAGCAAATTCAAGCATTCCCAGAGAATGGACAGTTTACAGAGCCTCAAGAGTGGTCGTGACCAATCTGCCCCTTTCAGACCCTCTCAGTTACTCACAAAGTCTGAAC
CircID chr2:27440496|27440878
ORF Type ORF6
Protein Length 48
Nucleotide Length 147
Protein Sequence MEGDEDRSHGLCERLRIPNPACFLKKACFSLCSHLTSSRNLSNSRAGD
Nucleotide Sequence CTGGAGGGAGATGAAGACAGGTCACATGGGCTCTGTGAACGCCTTAGGATACCCAACCCCGCCTGCTTCCTCAAGAAAGCCTGCTTCTCACTCTGCTCTCACCTGACATCTTCAAGGAATTTATCTAATTCCAGAGCTGGTGACTGA
CircID chr2:27440496|27440878
ORF Type ORF7
Protein Length 52
Nucleotide Length 156
Protein Sequence MDEKRERRWKERNKQNSKFKHSQRMDSLQSLKSGRDQSAPFRPSQLLTKSEL
Nucleotide Sequence CTGGACGAGAAAAGAGAAAGGAGATGGAAGGAAAGAAACAAGCAAAATAGCAAATTCAAGCATTCCCAGAGAATGGACAGTTTACAGAGCCTCAAGAGTGGTCGTGACCAATCTGCCCCTTTCAGACCCTCTCAGTTACTCACAAAGTCTGAACTG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab