CircNet

General Information

circRNA Basic Information

CircID	chr2:27457841\|27458142
Strand	-
CircType	exon
Host Gene	ENSG00000138002.13;
Algorism	CIRI2;
Sequence	CTTGCCCAGATGTAGGTGTGTATCACTGAGGAGATCTGGATGGTGCTTCCCTACCAGGCGGATCATGTCATCATACAACTTGTGCTTTTTGTACATGGTGATGGCAAGATCAGGCTCTTGTACTGTCACATATAGCCTTTCAGCCTCACGGTA

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr2:27457841\|27458142	hsa-miR-29a-5p	0	0	1
chr2:27457841\|27458142	hsa-miR-29a-3p	0	0	1
chr2:27457841\|27458142	hsa-miR-29c-5p	0	0	1
chr2:27457841\|27458142	hsa-miR-29c-3p	0	0	1
chr2:27457841\|27458142	hsa-miR-382-5p	0	0	1
chr2:27457841\|27458142	hsa-miR-382-3p	0	0	1
chr2:27457841\|27458142	hsa-miR-335-5p	0	0	1
chr2:27457841\|27458142	hsa-miR-335-3p	0	0	1
chr2:27457841\|27458142	hsa-miR-488-5p	0	0	1
chr2:27457841\|27458142	hsa-miR-488-3p	0	0	1
chr2:27457841\|27458142	hsa-miR-603	0	0	1
chr2:27457841\|27458142	hsa-miR-612	0	0	1
chr2:27457841\|27458142	hsa-miR-297	0	0	1
chr2:27457841\|27458142	hsa-miR-1228-5p	0	0	1
chr2:27457841\|27458142	hsa-miR-1228-3p	0	0	1
chr2:27457841\|27458142	hsa-miR-1272	0	0	1
chr2:27457841\|27458142	hsa-miR-1322	0	0	1
chr2:27457841\|27458142	hsa-miR-767-5p	0	1	1
chr2:27457841\|27458142	hsa-miR-485-5p	0	0	1
chr2:27457841\|27458142	hsa-miR-542-3p	0	1	1
chr2:27457841\|27458142	hsa-miR-362-3p	0	1	1
chr2:27457841\|27458142	hsa-miR-1285	0	0	1
chr2:27457841\|27458142	hsa-miR-329	0	0	1
chr2:27457841\|27458142	hsa-miR-1201	0	0	1
chr2:27457841\|27458142	hsa-miR-29b	0	0	1
chr2:27457841\|27458142	hsa-miR-101	0	0	1
chr2:27457841\|27458142	hsa-miR-593-5p	0	1	0
chr2:27457841\|27458142	hsa-miR-6786-5p	1	0	0
chr2:27457841\|27458142	hsa-miR-4776-3p	0	1	0
chr2:27457841\|27458142	hsa-miR-6818-5p	0	1	0
chr2:27457841\|27458142	hsa-miR-1298-3p	0	1	0
chr2:27457841\|27458142	hsa-miR-29b-3p	0	1	0
chr2:27457841\|27458142	hsa-miR-4789-5p	0	1	0
chr2:27457841\|27458142	hsa-miR-6803-5p	1	0	0
chr2:27457841\|27458142	hsa-miR-6791-5p	1	0	0
chr2:27457841\|27458142	hsa-miR-6884-5p	0	1	0
chr2:27457841\|27458142	hsa-miR-498-3p	0	1	0

Target Genes

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr2:27457841\|27458142
ORF Type	ORF1
Protein Length	31
Nucleotide Length	96
Protein Sequence	MVLPYQADHVIIQLVLFVHGDGKIRLLYCHI
Nucleotide Sequence	ATGGTGCTTCCCTACCAGGCGGATCATGTCATCATACAACTTGTGCTTTTTGTACATGGTGATGGCAAGATCAGGCTCTTGTACTGTCACATATAG

CircID	chr2:27457841\|27458142
ORF Type	ORF2
Protein Length	50
Nucleotide Length	150
Protein Sequence	LPRCRCVSLRRSGWCFPTRRIMSSYNLCFLYMVMARSGSCTVTYSLSASR
Nucleotide Sequence	TTGCCCAGATGTAGGTGTGTATCACTGAGGAGATCTGGATGGTGCTTCCCTACCAGGCGGATCATGTCATCATACAACTTGTGCTTTTTGTACATGGTGATGGCAAGATCAGGCTCTTGTACTGTCACATATAGCCTTTCAGCCTCACGG

CircID	chr2:27457841\|27458142
ORF Type	ORF3
Protein Length	32
Nucleotide Length	96
Protein Sequence	MYKKHKLYDDMIRLVGKHHPDLLSDTHLHLGK
Nucleotide Sequence	ATGTACAAAAAGCACAAGTTGTATGATGACATGATCCGCCTGGTAGGGAAGCACCATCCAGATCTCCTCAGTGATACACACCTACATCTGGGCAAG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information