CircNet

General Information

circRNA Basic Information

CircID	chr2:28901987\|28914208
Strand	+
CircType	exon
Host Gene	ENSG00000163811.11;
Algorism	find_circ;CIRI2;CIRC
Sequence	GAAAGTCCCCAGAGGAAAAAAAGGAAATCAGAAGCTGTAGGAATGAGTAACCAGACTGACTTATTGGCTCTTGGCACAGCAGTTGGTAGCATTTTATTATACAGCACAGTAAAAGGAGAGTTACACAGTAAATTAATAAGTGGTGGACATGACAACAGAGTCAACTGCATACAGTGGCATCAAGACAGTGGCTGTTTATATAGTTGTTCAGATGATAAACATATTGTGGAATGGAACGTACAGACATGCAAAGTAAAGTGCAAATGGAAAGGCGACAATAGCAGTGTCAGTTCCCTATGTATCAGCCCAGATGGAAAGATGTTGCTTTCAGCTGGTCGAACAATCAAACTATGGGTTTTGGAGACCAAAGAAGTCTACAGGCATTTCACAGGACATGCAACGCCAGTTTCGTCACTGATGTTCACTACCATCAGACCTCCTAATGAGAGCCAGCCCTTTGATGGAATTACAGGTCTTTATTTCTTATCTGGAGCAGTACATGACCGGTTACTTAATGTCTG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr2:28901987\|28914208	hsa-miR-760	1	1	1
chr2:28901987\|28914208	hsa-miR-4656	1	1	1
chr2:28901987\|28914208	hsa-miR-5190	1	1	1
chr2:28901987\|28914208	hsa-miR-9-5p	1	1	1
chr2:28901987\|28914208	hsa-miR-29a-5p	0	1	1
chr2:28901987\|28914208	hsa-miR-8069	1	1	1
chr2:28901987\|28914208	hsa-miR-4697-3p	1	1	1
chr2:28901987\|28914208	hsa-miR-4738-3p	1	1	1
chr2:28901987\|28914208	hsa-miR-6757-3p	1	1	1
chr2:28901987\|28914208	hsa-miR-4446-3p	1	1	1
chr2:28901987\|28914208	hsa-miR-3158-3p	1	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr2:28901987\|28914208
ORF Type	ORF1
Protein Length	159
Nucleotide Length	477
Protein Sequence	MSNQTDLLALGTAVGSILLYSTVKGELHSKLISGGHDNRVNCIQWHQDSGCLYSCSDDKHIVEWNVQTCKVKCKWKGDNSSVSSLCISPDGKMLLSAGRTIKLWVLETKEVYRHFTGHATPVSSLMFTTIRPPNESQPFDGITGLYFLSGAVHDRLLNV
Nucleotide Sequence	ATGAGTAACCAGACTGACTTATTGGCTCTTGGCACAGCAGTTGGTAGCATTTTATTATACAGCACAGTAAAAGGAGAGTTACACAGTAAATTAATAAGTGGTGGACATGACAACAGAGTCAACTGCATACAGTGGCATCAAGACAGTGGCTGTTTATATAGTTGTTCAGATGATAAACATATTGTGGAATGGAACGTACAGACATGCAAAGTAAAGTGCAAATGGAAAGGCGACAATAGCAGTGTCAGTTCCCTATGTATCAGCCCAGATGGAAAGATGTTGCTTTCAGCTGGTCGAACAATCAAACTATGGGTTTTGGAGACCAAAGAAGTCTACAGGCATTTCACAGGACATGCAACGCCAGTTTCGTCACTGATGTTCACTACCATCAGACCTCCTAATGAGAGCCAGCCCTTTGATGGAATTACAGGTCTTTATTTCTTATCTGGAGCAGTACATGACCGGTTACTTAATGTC

CircID	chr2:28901987\|28914208
ORF Type	ORF2
Protein Length	56
Nucleotide Length	168
Protein Sequence	MQLTLLSCPPLINLLCNSPFTVLYNKMLPTAVPRANKSVWLLIPTASDFLFFLWGL
Nucleotide Sequence	ATGCAGTTGACTCTGTTGTCATGTCCACCACTTATTAATTTACTGTGTAACTCTCCTTTTACTGTGCTGTATAATAAAATGCTACCAACTGCTGTGCCAAGAGCCAATAAGTCAGTCTGGTTACTCATTCCTACAGCTTCTGATTTCCTTTTTTTCCTCTGGGGACTT

CircID	chr2:28901987\|28914208
ORF Type	ORF3
Protein Length	49
Nucleotide Length	147
Protein Sequence	MYQPRWKDVAFSWSNNQTMGFGDQRSLQAFHRTCNASFVTDVHYHQTS*
Nucleotide Sequence	ATGTATCAGCCCAGATGGAAAGATGTTGCTTTCAGCTGGTCGAACAATCAAACTATGGGTTTTGGAGACCAAAGAAGTCTACAGGCATTTCACAGGACATGCAACGCCAGTTTCGTCACTGATGTTCACTACCATCAGACCTCCTAA

CircID	chr2:28901987\|28914208
ORF Type	ORF4
Protein Length	36
Nucleotide Length	108
Protein Sequence	MERCCFQLVEQSNYGFWRPKKSTGISQDMQRQFRH*
Nucleotide Sequence	ATGGAAAGATGTTGCTTTCAGCTGGTCGAACAATCAAACTATGGGTTTTGGAGACCAAAGAAGTCTACAGGCATTTCACAGGACATGCAACGCCAGTTTCGTCACTGA

CircID	chr2:28901987\|28914208
ORF Type	ORF5
Protein Length	36
Nucleotide Length	108
Protein Sequence	MTTESTAYSGIKTVAVYIVVQMINILWNGTYRHAK*
Nucleotide Sequence	ATGACAACAGAGTCAACTGCATACAGTGGCATCAAGACAGTGGCTGTTTATATAGTTGTTCAGATGATAAACATATTGTGGAATGGAACGTACAGACATGCAAAGTAA

CircID	chr2:28901987\|28914208
ORF Type	ORF6
Protein Length	63
Nucleotide Length	189
Protein Sequence	LVSKTHSLIVRPAESNIFPSGLIHRELTLLLSPFHLHFTLHVCTFHSTICLSSEQLYKQPLS*
Nucleotide Sequence	TTGGTCTCCAAAACCCATAGTTTGATTGTTCGACCAGCTGAAAGCAACATCTTTCCATCTGGGCTGATACATAGGGAACTGACACTGCTATTGTCGCCTTTCCATTTGCACTTTACTTTGCATGTCTGTACGTTCCATTCCACAATATGTTTATCATCTGAACAACTATATAAACAGCCACTGTCTTGA

CircID	chr2:28901987\|28914208
ORF Type	ORF7
Protein Length	53
Nucleotide Length	159
Protein Sequence	LCCHVHHLLIYCVTLLLLCCIIKCYQLLCQEPISQSGYSFLQLLISFFSSGDF
Nucleotide Sequence	CTCTGTTGTCATGTCCACCACTTATTAATTTACTGTGTAACTCTCCTTTTACTGTGCTGTATAATAAAATGCTACCAACTGCTGTGCCAAGAGCCAATAAGTCAGTCTGGTTACTCATTCCTACAGCTTCTGATTTCCTTTTTTTCCTCTGGGGACTTT

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr2:28901987\|28914208	KHSRP	0	2	0
chr2:28901987\|28914208	MOV10	0	1	1
chr2:28901987\|28914208	ELAVL1	4	1	4
chr2:28901987\|28914208	NUMA1	1	0	0
chr2:28901987\|28914208	CNBP	1	0	0
chr2:28901987\|28914208	PRPF8	0	4	0
chr2:28901987\|28914208	FMR1	1	0	6
chr2:28901987\|28914208	FUS	0	2	0
chr2:28901987\|28914208	DGCR8	0	0	1
chr2:28901987\|28914208	SRSF1	1	0	1
chr2:28901987\|28914208	NOP58	2	1	3
chr2:28901987\|28914208	SRSF3	1	0	0
chr2:28901987\|28914208	U2AF1	0	0	4
chr2:28901987\|28914208	ADAR	0	1	0
chr2:28901987\|28914208	U2AF2	12	9	5
chr2:28901987\|28914208	SRSF9	0	1	1
chr2:28901987\|28914208	DDX54	2	1	15
chr2:28901987\|28914208	HNRNPM	7	0	0
chr2:28901987\|28914208	FIP1L1	0	1	0
chr2:28901987\|28914208	PTBP1	2	0	0
chr2:28901987\|28914208	HNRNPC	5	2	1
chr2:28901987\|28914208	HNRNPA1	2	1	0
chr2:28901987\|28914208	DDX3X	1	0	0
chr2:28901987\|28914208	ZC3H7B	1	0	0
chr2:28901987\|28914208	ACIN1	1	3	11
chr2:28901987\|28914208	LIN28B	0	0	1
chr2:28901987\|28914208	LIN28A	0	0	1
chr2:28901987\|28914208	FXR2	0	0	1
chr2:28901987\|28914208	IGF2BP1	0	1	5
chr2:28901987\|28914208	IGF2BP2	0	3	8
chr2:28901987\|28914208	TARDBP	2	1	0
chr2:28901987\|28914208	BUD13	1	0	1
chr2:28901987\|28914208	RBM47	0	2	3
chr2:28901987\|28914208	CSTF2T	0	1	3
chr2:28901987\|28914208	TIA1	0	2	0
chr2:28901987\|28914208	TIAL1	0	1	0
chr2:28901987\|28914208	FBL	2	2	4
chr2:28901987\|28914208	AGO1	0	0	1
chr2:28901987\|28914208	EWSR1	0	1	0
chr2:28901987\|28914208	EIF4A3	6	5	10
chr2:28901987\|28914208	AGO2	0	0	5

CircRNA Information