CircNet

General Information

circRNA Basic Information

CircID	chr2:28901987\|28927700
Strand	+
CircType	exon
Host Gene	ENSG00000163811.11;
Algorism	CIRI2;
Sequence	GAAAGTCCCCAGAGGAAAAAAAGGAAATCAGAAGCTGTAGGAATGAGTAACCAGACTGACTTATTGGCTCTTGGCACAGCAGTTGGTAGCATTTTATTATACAGCACAGTAAAAGGAGAGTTACACAGTAAATTAATAGTGAGGACACCAGTGATGAATTCTGAAGCAAAAGTTCTGGTGCCTGGGATTCCTGGTCATCATGCAGCTATCAAGCCCGCTCCTCCACAAACCGAGCAAGTAGAGAGCAAGAGGAAGTCAGGGGGAAATGAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr2:28901987\|28927700	hsa-miR-29a-5p	0	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr2:28901987\|28927700
ORF Type	ORF1
Protein Length	76
Nucleotide Length	228
Protein Sequence	MSNQTDLLALGTAVGSILLYSTVKGELHSKLIVRTPVMNSEAKVLVPGIPGHHAAIKPAPPQTEQVESKRKSGGNE
Nucleotide Sequence	ATGAGTAACCAGACTGACTTATTGGCTCTTGGCACAGCAGTTGGTAGCATTTTATTATACAGCACAGTAAAAGGAGAGTTACACAGTAAATTAATAGTGAGGACACCAGTGATGAATTCTGAAGCAAAAGTTCTGGTGCCTGGGATTCCTGGTCATCATGCAGCTATCAAGCCCGCTCCTCCACAAACCGAGCAAGTAGAGAGCAAGAGGAAGTCAGGGGGAAATGAG

CircID	chr2:28901987\|28927700
ORF Type	ORF2
Protein Length	30
Nucleotide Length	90
Protein Sequence	MLPTAVPRANKSVWLLIPTASDFLFFLWGL
Nucleotide Sequence	ATGCTACCAACTGCTGTGCCAAGAGCCAATAAGTCAGTCTGGTTACTCATTCCTACAGCTTCTGATTTCCTTTTTTTCCTCTGGGGACTT

CircID	chr2:28901987\|28927700
ORF Type	ORF3
Protein Length	56
Nucleotide Length	168
Protein Sequence	LLQNSSLVSSLLIYCVTLLLLCCIIKCYQLLCQEPISQSGYSFLQLLISFFSSGDF
Nucleotide Sequence	TTGCTTCAGAATTCATCACTGGTGTCCTCACTATTAATTTACTGTGTAACTCTCCTTTTACTGTGCTGTATAATAAAATGCTACCAACTGCTGTGCCAAGAGCCAATAAGTCAGTCTGGTTACTCATTCCTACAGCTTCTGATTTCCTTTTTTTCCTCTGGGGACTTT

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr2:28901987\|28927700	MSI2	0	1	0
chr2:28901987\|28927700	KHSRP	0	2	0
chr2:28901987\|28927700	MOV10	0	2	0
chr2:28901987\|28927700	NCBP3	0	1	1
chr2:28901987\|28927700	FKBP4	0	1	0
chr2:28901987\|28927700	PRPF8	0	5	0
chr2:28901987\|28927700	TNRC6A	0	2	0
chr2:28901987\|28927700	TROVE2	0	2	0
chr2:28901987\|28927700	GNL3	0	2	0
chr2:28901987\|28927700	DGCR8	0	7	1
chr2:28901987\|28927700	PTBP1	2	3	0
chr2:28901987\|28927700	METTL14	0	3	0
chr2:28901987\|28927700	DDX3X	1	2	0
chr2:28901987\|28927700	LARP7	0	4	0
chr2:28901987\|28927700	ACIN1	1	5	3
chr2:28901987\|28927700	RANGAP1	0	2	0
chr2:28901987\|28927700	FXR1	0	2	0
chr2:28901987\|28927700	FXR2	0	1	0
chr2:28901987\|28927700	BUD13	1	2	0
chr2:28901987\|28927700	GTF2F1	0	4	0
chr2:28901987\|28927700	RBM47	0	0	2
chr2:28901987\|28927700	EIF4G2	0	1	0
chr2:28901987\|28927700	CSTF2T	0	3	1
chr2:28901987\|28927700	VIM	0	1	0
chr2:28901987\|28927700	RNF219	0	1	0
chr2:28901987\|28927700	TIAL1	0	2	0
chr2:28901987\|28927700	SLBP	0	2	0
chr2:28901987\|28927700	ELAVL1	4	9	2
chr2:28901987\|28927700	KHDRBS1	0	2	0
chr2:28901987\|28927700	CELF2	0	1	0
chr2:28901987\|28927700	SRSF7	0	3	0
chr2:28901987\|28927700	SRSF1	1	14	1
chr2:28901987\|28927700	SRSF3	1	3	0
chr2:28901987\|28927700	NONO	0	2	0
chr2:28901987\|28927700	U2AF2	12	24	2
chr2:28901987\|28927700	SRSF9	0	2	0
chr2:28901987\|28927700	DDX54	2	3	10
chr2:28901987\|28927700	PCBP2	0	1	0
chr2:28901987\|28927700	SF3A3	0	2	0
chr2:28901987\|28927700	ZNF184	0	1	0
chr2:28901987\|28927700	XRN2	0	2	0
chr2:28901987\|28927700	LIN28B	0	5	0
chr2:28901987\|28927700	LIN28A	0	2	0
chr2:28901987\|28927700	BCCIP	0	2	0
chr2:28901987\|28927700	FTO	0	1	0
chr2:28901987\|28927700	RBFOX2	0	5	0
chr2:28901987\|28927700	RBM27	0	2	0
chr2:28901987\|28927700	RBM22	0	3	0
chr2:28901987\|28927700	WDR33	0	1	0
chr2:28901987\|28927700	AIFM1	0	2	0
chr2:28901987\|28927700	AGO1	0	1	0
chr2:28901987\|28927700	EIF4A3	6	6	5
chr2:28901987\|28927700	AGO2	0	7	2
chr2:28901987\|28927700	CNBP	1	1	0
chr2:28901987\|28927700	UPF1	0	3	0
chr2:28901987\|28927700	TAF15	0	3	0
chr2:28901987\|28927700	FUS	0	5	0
chr2:28901987\|28927700	HNRNPU	0	2	0
chr2:28901987\|28927700	HNRNPK	0	3	0
chr2:28901987\|28927700	HNRNPL	0	1	0
chr2:28901987\|28927700	HNRNPM	7	2	0
chr2:28901987\|28927700	HNRNPC	5	11	1
chr2:28901987\|28927700	WTAP	0	1	0
chr2:28901987\|28927700	SMNDC1	0	4	0
chr2:28901987\|28927700	AUH	0	3	0
chr2:28901987\|28927700	HNRNPA1	2	10	0
chr2:28901987\|28927700	SND1	0	4	0
chr2:28901987\|28927700	IGF2BP1	0	3	0
chr2:28901987\|28927700	IGF2BP3	0	9	1
chr2:28901987\|28927700	IGF2BP2	0	13	5
chr2:28901987\|28927700	MBNL2	0	4	0
chr2:28901987\|28927700	HNRNPUL1	0	4	0
chr2:28901987\|28927700	TARDBP	2	4	0
chr2:28901987\|28927700	YTHDC1	0	1	0
chr2:28901987\|28927700	DICER1	0	2	0
chr2:28901987\|28927700	RTCB	0	1	0
chr2:28901987\|28927700	METTL3	0	1	0
chr2:28901987\|28927700	TRA2A	0	4	0
chr2:28901987\|28927700	FBL	2	5	3
chr2:28901987\|28927700	NUMA1	1	0	0
chr2:28901987\|28927700	SF3B4	0	2	0
chr2:28901987\|28927700	FMR1	1	3	4
chr2:28901987\|28927700	CPSF6	0	1	0
chr2:28901987\|28927700	NOP58	2	5	5
chr2:28901987\|28927700	NOP56	0	2	0
chr2:28901987\|28927700	LSM11	0	2	0
chr2:28901987\|28927700	HNRNPA2B1	0	3	0
chr2:28901987\|28927700	YWHAG	0	2	0
chr2:28901987\|28927700	ZC3H7B	1	1	0
chr2:28901987\|28927700	SBDS	0	2	0
chr2:28901987\|28927700	RBM10	0	2	0
chr2:28901987\|28927700	NPM1	0	2	0
chr2:28901987\|28927700	U2AF1	0	4	0
chr2:28901987\|28927700	DKC1	0	1	0
chr2:28901987\|28927700	EWSR1	0	2	0
chr2:28901987\|28927700	ILF3	0	2	0

CircRNA Information