CircNet

General Information

circRNA Basic Information

CircID	chr2:29121374\|29152828
Strand	+
CircType	exon
Host Gene	ENSG00000115295.19;
Algorism	find_circ;CIRI2;DCC;
Sequence	GTGGCTTTCTAGAAGATGACCATAGAGGACCTTCCAGATTTTCCATTAGAAGGAAATCCTTTGTTTGGAAGATACCCATTTATATTTTCTGCTTCTGATACCCCAGTTATCTTTTCCATTTCTGCAGCACCAATGCCTTCAGACTGTG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr2:29121374\|29152828	hsa-miR-141-5p	0	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr2:29121374\|29152828
ORF Type	ORF1
Protein Length	44
Nucleotide Length	132
Protein Sequence	MTIEDLPDFPLEGNPLFGRYPFIFSASDTPVIFSISAAPMPSDC
Nucleotide Sequence	ATGACCATAGAGGACCTTCCAGATTTTCCATTAGAAGGAAATCCTTTGTTTGGAAGATACCCATTTATATTTTCTGCTTCTGATACCCCAGTTATCTTTTCCATTTCTGCAGCACCAATGCCTTCAGACTGT

CircID	chr2:29121374\|29152828
ORF Type	ORF2
Protein Length	37
Nucleotide Length	111
Protein Sequence	MEKITGVSEAENINGYLPNKGFPSNGKSGRSSMVIF*
Nucleotide Sequence	ATGGAAAAGATAACTGGGGTATCAGAAGCAGAAAATATAAATGGGTATCTTCCAAACAAAGGATTTCCTTCTAATGGAAAATCTGGAAGGTCCTCTATGGTCATCTTCTAG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr2:29121374\|29152828	DGCR8	1	0	0
chr2:29121374\|29152828	TAF15	0	1	0
chr2:29121374\|29152828	HNRNPA1	1	0	0
chr2:29121374\|29152828	ELAVL1	1	2	0
chr2:29121374\|29152828	RBM47	0	1	1
chr2:29121374\|29152828	U2AF2	0	6	1
chr2:29121374\|29152828	FUS	0	2	0
chr2:29121374\|29152828	HNRNPA2B1	2	0	0
chr2:29121374\|29152828	TIAL1	0	1	0
chr2:29121374\|29152828	PTBP1	0	1	0
chr2:29121374\|29152828	IGF2BP2	0	1	2
chr2:29121374\|29152828	ELAVL3	0	1	0
chr2:29121374\|29152828	EIF4A3	0	2	0
chr2:29121374\|29152828	NOP58	1	0	1

CircRNA Information