CircNet

General Information

circRNA Basic Information

CircID	chr2:33360597\|33365503
Strand	+
CircType	exon
Host Gene	ENSG00000049323.15;
Algorism	find_circ;CIRI2;DCC;
Sequence	ATTTAGATGTAGATGTAGATCAACCCAAAGAAGAAAAGAAAGAATGCTACTATAATCTCAATGACGCCAGTCTCTGTGATAATGTGTTGGCCCCCAATGTCACGAAACAAGAATGCTGCTGTACATCAGGCGTGGGATGGGGAGATAACTGCGAAATCTTCCCCTGCCCGGTCTTGGGAACTGCTGAGTTCACTGAAATGTGTCCCAAAGGGAAAGGTTTTGTGCCTGCTGGAGAATCATCTTCTGAAGCTGGTGGTGAGAACTATAAAGATATGGATGAATGTCAAGACCCCAGTAGTTGTATTGATGGCCAGTGTGTTAATACAGAGGGCTCTTACAACTGCTTCTGTACTCACCCCATGGTCCTGGATGCGTCAGAAAAAAGATGTATACGACCGGCTGAGTCAAACGAACAAATAGAAGAAACTGATGTCTACCAAGATTTGTGCTGGGAACATCTGAGTGATGAATACGTGTGTAGCCGGCCTCTTGTGGGCAAGCAGACAACGTACACTGAGTGCTGCTGTCTGTATGGAGAGGCCTGGGGCATGCAGTGTGCCCTCTGCCCCCTGAAGGATTCAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr2:33360597\|33365503	hsa-miR-197-3p	0	1	1
chr2:33360597\|33365503	hsa-miR-205-3p	0	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr2:33360597\|33365503
ORF Type	ORF1
Protein Length	128
Nucleotide Length	384
Protein Sequence	MCPKGKGFVPAGESSSEAGGENYKDMDECQDPSSCIDGQCVNTEGSYNCFCTHPMVLDASEKRCIRPAESNEQIEETDVYQDLCWEHLSDEYVCSRPLVGKQTTYTECCCLYGEAWGMQCALCPLKDS
Nucleotide Sequence	ATGTGTCCCAAAGGGAAAGGTTTTGTGCCTGCTGGAGAATCATCTTCTGAAGCTGGTGGTGAGAACTATAAAGATATGGATGAATGTCAAGACCCCAGTAGTTGTATTGATGGCCAGTGTGTTAATACAGAGGGCTCTTACAACTGCTTCTGTACTCACCCCATGGTCCTGGATGCGTCAGAAAAAAGATGTATACGACCGGCTGAGTCAAACGAACAAATAGAAGAAACTGATGTCTACCAAGATTTGTGCTGGGAACATCTGAGTGATGAATACGTGTGTAGCCGGCCTCTTGTGGGCAAGCAGACAACGTACACTGAGTGCTGCTGTCTGTATGGAGAGGCCTGGGGCATGCAGTGTGCCCTCTGCCCCCTGAAGGATTCA

CircID	chr2:33360597\|33365503
ORF Type	ORF2
Protein Length	120
Nucleotide Length	360
Protein Sequence	MTPVSVIMCWPPMSRNKNAAVHQAWDGEITAKSSPARSWELLSSLKCVPKGKVLCLLENHLLKLVVRTIKIWMNVKTPVVVLMASVLIQRALTTASVLTPWSWMRQKKDVYDRLSQTNK*
Nucleotide Sequence	ATGACGCCAGTCTCTGTGATAATGTGTTGGCCCCCAATGTCACGAAACAAGAATGCTGCTGTACATCAGGCGTGGGATGGGGAGATAACTGCGAAATCTTCCCCTGCCCGGTCTTGGGAACTGCTGAGTTCACTGAAATGTGTCCCAAAGGGAAAGGTTTTGTGCCTGCTGGAGAATCATCTTCTGAAGCTGGTGGTGAGAACTATAAAGATATGGATGAATGTCAAGACCCCAGTAGTTGTATTGATGGCCAGTGTGTTAATACAGAGGGCTCTTACAACTGCTTCTGTACTCACCCCATGGTCCTGGATGCGTCAGAAAAAAGATGTATACGACCGGCTGAGTCAAACGAACAAATAG

CircID	chr2:33360597\|33365503
ORF Type	ORF3
Protein Length	39
Nucleotide Length	117
Protein Sequence	MPQASPYRQQHSVYVVCLPTRGRLHTYSSLRCSQHKSW*
Nucleotide Sequence	ATGCCCCAGGCCTCTCCATACAGACAGCAGCACTCAGTGTACGTTGTCTGCTTGCCCACAAGAGGCCGGCTACACACGTATTCATCACTCAGATGTTCCCAGCACAAATCTTGGTAG

CircID	chr2:33360597\|33365503
ORF Type	ORF4
Protein Length	36
Nucleotide Length	108
Protein Sequence	MNTCVAGLLWASRQRTLSAAVCMERPGACSVPSAP*
Nucleotide Sequence	ATGAATACGTGTGTAGCCGGCCTCTTGTGGGCAAGCAGACAACGTACACTGAGTGCTGCTGTCTGTATGGAGAGGCCTGGGGCATGCAGTGTGCCCTCTGCCCCCTGA

CircID	chr2:33360597\|33365503
ORF Type	ORF5
Protein Length	63
Nucleotide Length	189
Protein Sequence	LSACPQEAGYTRIHHSDVPSTNLGRHQFLLFVRLTQPVVYIFFLTHPGPWGEYRSSCKSPLY*
Nucleotide Sequence	TTGTCTGCTTGCCCACAAGAGGCCGGCTACACACGTATTCATCACTCAGATGTTCCCAGCACAAATCTTGGTAGACATCAGTTTCTTCTATTTGTTCGTTTGACTCAGCCGGTCGTATACATCTTTTTTCTGACGCATCCAGGACCATGGGGTGAGTACAGAAGCAGTTGTAAGAGCCCTCTGTATTAA

CircID	chr2:33360597\|33365503
ORF Type	ORF6
Protein Length	53
Nucleotide Length	159
Protein Sequence	LGHISVNSAVPKTGQGKISQLSPHPTPDVQQHSCFVTLGANTLSQRLASLRL*
Nucleotide Sequence	TTGGGACACATTTCAGTGAACTCAGCAGTTCCCAAGACCGGGCAGGGGAAGATTTCGCAGTTATCTCCCCATCCCACGCCTGATGTACAGCAGCATTCTTGTTTCGTGACATTGGGGGCCAACACATTATCACAGAGACTGGCGTCATTGAGATTATAG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr2:33360597\|33365503	FMR1	0	0	1
chr2:33360597\|33365503	U2AF2	6	4	0
chr2:33360597\|33365503	MOV10	2	0	0
chr2:33360597\|33365503	FUS	3	1	0
chr2:33360597\|33365503	FAM120A	2	0	0
chr2:33360597\|33365503	YTHDF3	1	0	0
chr2:33360597\|33365503	PRPF8	1	0	0
chr2:33360597\|33365503	YTHDF1	8	0	0
chr2:33360597\|33365503	UPF1	15	0	0
chr2:33360597\|33365503	TAF15	2	1	0
chr2:33360597\|33365503	CAPRIN1	3	0	0
chr2:33360597\|33365503	CPSF7	2	1	0
chr2:33360597\|33365503	DDX3X	25	0	0
chr2:33360597\|33365503	NUDT21	2	0	0
chr2:33360597\|33365503	CPSF4	0	1	0
chr2:33360597\|33365503	CPSF3	0	1	0
chr2:33360597\|33365503	RBM15B	2	0	0
chr2:33360597\|33365503	CPSF1	1	0	0
chr2:33360597\|33365503	ELAVL1	28	8	0
chr2:33360597\|33365503	WDR33	0	2	0
chr2:33360597\|33365503	NOP58	1	1	0
chr2:33360597\|33365503	ADAR	1	0	1
chr2:33360597\|33365503	NOP56	1	0	0
chr2:33360597\|33365503	DDX54	0	0	1
chr2:33360597\|33365503	EIF3G	1	0	0
chr2:33360597\|33365503	IGF2BP1	1	0	0
chr2:33360597\|33365503	HNRNPL	1	0	0
chr2:33360597\|33365503	RBM15	1	0	0
chr2:33360597\|33365503	PCBP2	1	0	0
chr2:33360597\|33365503	PTBP1	1	7	0
chr2:33360597\|33365503	HNRNPC	29	12	0
chr2:33360597\|33365503	DHX9	0	1	0
chr2:33360597\|33365503	LARP4	2	0	0
chr2:33360597\|33365503	ZC3H7B	7	0	0
chr2:33360597\|33365503	HNRNPA1	2	1	0
chr2:33360597\|33365503	LIN28B	12	0	0
chr2:33360597\|33365503	LIN28A	0	0	1
chr2:33360597\|33365503	UCHL5	1	0	0
chr2:33360597\|33365503	IGF2BP3	3	0	0
chr2:33360597\|33365503	IGF2BP2	2	0	4
chr2:33360597\|33365503	TARDBP	1	1	0
chr2:33360597\|33365503	YTHDC1	2	0	0
chr2:33360597\|33365503	KHSRP	0	2	0
chr2:33360597\|33365503	CNBP	1	0	1
chr2:33360597\|33365503	YTHDF2	3	0	0
chr2:33360597\|33365503	CSTF2T	2	1	0
chr2:33360597\|33365503	SRRM4	2	0	0
chr2:33360597\|33365503	CSTF2	3	4	0
chr2:33360597\|33365503	TIAL1	0	1	0
chr2:33360597\|33365503	RTCB	1	0	0
chr2:33360597\|33365503	RPS3	3	0	0
chr2:33360597\|33365503	FBL	2	0	0
chr2:33360597\|33365503	ATXN2	4	0	0
chr2:33360597\|33365503	EWSR1	1	0	0
chr2:33360597\|33365503	EIF4A3	1	0	9
chr2:33360597\|33365503	AGO2	0	0	2

CircRNA Information