CircNet

General Information

circRNA Basic Information

CircID	chr2:38315284\|38343512
Strand	-
CircType	exon
Host Gene	ENSG00000119787.13;
Algorism	find_circ;CIRI2;DCC;
Sequence	GATTCTCAAAGTTGGATTGGTGGAAACAATGAACCATTGACAGGCTTTACATGGCGAGGTGGCTGTGAAAGAGAAACAACAGGCATACAAGTTTGGAATGAAGTATTTGTGATTGACAGACCTAATGGAACTAAAGTATATAATCTGTCTCAGAATATTCAAGAAGATGATCTTCAACATTTGCAA

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr2:38315284\|38343512
ORF Type	ORF1
Protein Length	60
Nucleotide Length	180
Protein Sequence	MLKIIFLNILRQIIYFSSIRSVNHKYFIPNLYACCFSFTATSPCKACQWFIVSTNPTLRI
Nucleotide Sequence	ATGTTGAAGATCATCTTCTTGAATATTCTGAGACAGATTATATACTTTAGTTCCATTAGGTCTGTCAATCACAAATACTTCATTCCAAACTTGTATGCCTGTTGTTTCTCTTTCACAGCCACCTCGCCATGTAAAGCCTGTCAATGGTTCATTGTTTCCACCAATCCAACTTTGAGAATC

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr2:38315284\|38343512	NOP56	1	0	0
chr2:38315284\|38343512	MOV10	0	1	0
chr2:38315284\|38343512	ELAVL1	7	6	1
chr2:38315284\|38343512	SF3B4	0	1	0
chr2:38315284\|38343512	PRPF8	0	1	0
chr2:38315284\|38343512	UPF1	1	1	0
chr2:38315284\|38343512	TAF15	2	0	0
chr2:38315284\|38343512	FMR1	0	0	1
chr2:38315284\|38343512	CPSF6	1	0	0
chr2:38315284\|38343512	FUS	2	0	0
chr2:38315284\|38343512	DGCR8	0	0	1
chr2:38315284\|38343512	SRSF1	0	0	2
chr2:38315284\|38343512	NOP58	1	4	2
chr2:38315284\|38343512	U2AF2	5	10	0
chr2:38315284\|38343512	SRSF9	0	0	1
chr2:38315284\|38343512	DDX54	0	3	5
chr2:38315284\|38343512	PTBP1	6	0	0
chr2:38315284\|38343512	HNRNPC	14	3	0
chr2:38315284\|38343512	TRA2A	0	2	0
chr2:38315284\|38343512	DHX9	0	0	1
chr2:38315284\|38343512	HNRNPA1	3	0	0
chr2:38315284\|38343512	ZC3H7B	0	0	1
chr2:38315284\|38343512	ACIN1	1	4	3
chr2:38315284\|38343512	LIN28B	0	1	4
chr2:38315284\|38343512	LIN28A	0	0	1
chr2:38315284\|38343512	FXR2	1	0	0
chr2:38315284\|38343512	SND1	0	1	0
chr2:38315284\|38343512	IGF2BP2	1	3	6
chr2:38315284\|38343512	TARDBP	1	0	0
chr2:38315284\|38343512	BUD13	0	2	1
chr2:38315284\|38343512	RBM47	0	1	2
chr2:38315284\|38343512	CSTF2T	2	1	0
chr2:38315284\|38343512	CSTF2	1	0	0
chr2:38315284\|38343512	RBM22	0	2	0
chr2:38315284\|38343512	EIF4A3	0	1	4
chr2:38315284\|38343512	FBL	0	2	1

CircRNA Information