CircNet

General Information

circRNA Basic Information

CircID	chr2:43571707\|43590954
Strand	-
CircType	exon
Host Gene	ENSG00000115970.18;
Algorism	find_circ;CIRI2;DCC;
Sequence	ATTGTGCCTCTGCTGGAGAAAGCAGATAAAAATGGCATGTGTGATCCCACTATTCAAAGTTGTTTGGATATCTTAGCAGGCATTTATCTTTCTTTGAGTCTAAAGAATCCCTTGAAGAAAGTATTGGCAAGCTCACTAAATAGCCTGCCTGATTTTTTTCTACCTGAGGCTATGCACCGTTTTACTTCTCGTCTTCAGGAAGAATTGAATACTACTGACTTATACTCTTACAGGAAAGTTACTGACAATATTTCTTCCTGTATGGAGAACTTTAACTTGGGTAGAGCAAGTGTTAATAATCTGCTTAAAAATGTGCTTCATTTTCTGCAGAAGAGTTTAATTGAAATCCTGGAAGAAAATAGAAAATGTGCTGGAAATCATATTATTCAAACACAGTTGATGAATGACTTACTGGTAGGCATTAGAGTTTCAATGATGTTAGTACAGAAAGTACAAGATTTCCAGGGAAATCTTTGGAAGACTTCCGATTCTCCCATATGGCAAAATATGTGTGGATTGCTGAGTATTTTTACCAAGGTTTTAAGCGATGATGATCTGTTACAGACTGTACAGAGCACATCTGGATTAGCTATTATTCTTTTTATTAAGACTATGTTTCACCCGTCTGAAAAGATTCCTCATTTGATTAGCAGTGTGCTGCTTCGTTCAGTGGACTGCACCAGTGTCCCCGAGTGGTTTATGAGCAGCTGCAGGAGCCTCTGTTGTGGTGACATCTCTCAGTCAGCTGTCTTATTCCTCTGTCAGGGGACACTTGCCATGTTGGACTGGCAGAACGGAAGCATGGGTCGGAGTGGGGAGGCCCTGCTCTTGGATACTGCACATGTTTTGTTCACCTTGAGTTCACAGATTAAAGAGCCAACGCTGGAAATGTTTCTGTCTAGAATCTTAGCATCCTGGACTAATTCAGCCATACAAGTCCTTGAATCAAGTTCCCCGAGCCTAACGGACAGCCTGAATGGGAATTCAAGTATAGTTGGGAGACTTTTGGAATATGTCTATACCCATTGGGAACATCCATTGGATGCTCTGAGACACCAAACCAAAATCATGTTCAAAAACCTTCTCCAAATGCACCGGCTCACTGTGGAAGGTGCAGATTTCGTCCCTGATCCTTTCTTTGTGGAATTGACTGAGAGTCTTTTACGATTGGAATGGCATATTAAAGGAAAGTACACGTGCCTTGGTTGTTTGGTAGAGTGCATAGGAGTTGAACATATTTTGGCTATAGATAAAACTATTCCATCTCAAATCTTAGAGGTGATGGGAGACCAGTCATTGGTACCTTATGCAAGTGACCTCTTGGAAACCATGTTTAGAAATCATAAGAGTCATTTGAAATCCCAGACTGCTGAGAGTTCTTGGATTGACCAGTGGCATGAGACTTGGGTTTCTCCTCTCCTTTTTATATTGTGTGAAGGAAACTTGGATCAAAAATCTTACGTGATTGATTATTACTTGCCAAAATTATTAAGTTACAGCCCTGAAAGCTTACAGTACATGGTAAAGATTCTTCAGACTTCTATTGATGCTAAAACTGGACAAGAGCAATCTTTCCCATCCTTAGGGTCTTGTAATAGCAGGGGGGCTCTGGGAGCTTTGATGGCATGTCTGCGAATAGCTAGAGCTCATGGACATCTTCAGTCTGCAACTGATACCTGGGAGAACCTCGTGTCTGATGCAAGAATAAAGCAAGGCTTAATTCATCAGCATTGCCAAGTAAGGATAGATACATTAGGCTTGCTTTGTGAAAGTAATCGGAGCACAGAAATTGTTTCCATGGAAGAAATGCAGTGGATTCAGTTCTTTATTACATACAATCTTAACAGCCAGTCTCCAGGAGTGCGGCAACAGATCTGTTCTCTTCTTAAAAAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	miRanda	targetScan
chr2:43571707\|43590954	hsa-miR-147a	1	1
chr2:43571707\|43590954	hsa-miR-187-3p	1	1
chr2:43571707\|43590954	hsa-miR-105-5p	1	1
chr2:43571707\|43590954	hsa-miR-122-5p	1	1
chr2:43571707\|43590954	hsa-miR-7-5p	1	1

Target Genes

Note about Function Analysis:
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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr2:43571707\|43590954
ORF Type	ORF1
Protein Length	619
Nucleotide Length	1857
Protein Sequence	MCDPTIQSCLDILAGIYLSLSLKNPLKKVLASSLNSLPDFFLPEAMHRFTSRLQEELNTTDLYSYRKVTDNISSCMENFNLGRASVNNLLKNVLHFLQKSLIEILEENRKCAGNHIIQTQLMNDLLVGIRVSMMLVQKVQDFQGNLWKTSDSPIWQNMCGLLSIFTKVLSDDDLLQTVQSTSGLAIILFIKTMFHPSEKIPHLISSVLLRSVDCTSVPEWFMSSCRSLCCGDISQSAVLFLCQGTLAMLDWQNGSMGRSGEALLLDTAHVLFTLSSQIKEPTLEMFLSRILASWTNSAIQVLESSSPSLTDSLNGNSSIVGRLLEYVYTHWEHPLDALRHQTKIMFKNLLQMHRLTVEGADFVPDPFFVELTESLLRLEWHIKGKYTCLGCLVECIGVEHILAIDKTIPSQILEVMGDQSLVPYASDLLETMFRNHKSHLKSQTAESSWIDQWHETWVSPLLFILCEGNLDQKSYVIDYYLPKLLSYSPESLQYMVKILQTSIDAKTGQEQSFPSLGSCNSRGALGALMACLRIARAHGHLQSATDTWENLVSDARIKQGLIHQHCQVRIDTLGLLCESNRSTEIVSMEEMQWIQFFITYNLNSQSPGVRQQICSLLKK
Nucleotide Sequence	ATGTGTGATCCCACTATTCAAAGTTGTTTGGATATCTTAGCAGGCATTTATCTTTCTTTGAGTCTAAAGAATCCCTTGAAGAAAGTATTGGCAAGCTCACTAAATAGCCTGCCTGATTTTTTTCTACCTGAGGCTATGCACCGTTTTACTTCTCGTCTTCAGGAAGAATTGAATACTACTGACTTATACTCTTACAGGAAAGTTACTGACAATATTTCTTCCTGTATGGAGAACTTTAACTTGGGTAGAGCAAGTGTTAATAATCTGCTTAAAAATGTGCTTCATTTTCTGCAGAAGAGTTTAATTGAAATCCTGGAAGAAAATAGAAAATGTGCTGGAAATCATATTATTCAAACACAGTTGATGAATGACTTACTGGTAGGCATTAGAGTTTCAATGATGTTAGTACAGAAAGTACAAGATTTCCAGGGAAATCTTTGGAAGACTTCCGATTCTCCCATATGGCAAAATATGTGTGGATTGCTGAGTATTTTTACCAAGGTTTTAAGCGATGATGATCTGTTACAGACTGTACAGAGCACATCTGGATTAGCTATTATTCTTTTTATTAAGACTATGTTTCACCCGTCTGAAAAGATTCCTCATTTGATTAGCAGTGTGCTGCTTCGTTCAGTGGACTGCACCAGTGTCCCCGAGTGGTTTATGAGCAGCTGCAGGAGCCTCTGTTGTGGTGACATCTCTCAGTCAGCTGTCTTATTCCTCTGTCAGGGGACACTTGCCATGTTGGACTGGCAGAACGGAAGCATGGGTCGGAGTGGGGAGGCCCTGCTCTTGGATACTGCACATGTTTTGTTCACCTTGAGTTCACAGATTAAAGAGCCAACGCTGGAAATGTTTCTGTCTAGAATCTTAGCATCCTGGACTAATTCAGCCATACAAGTCCTTGAATCAAGTTCCCCGAGCCTAACGGACAGCCTGAATGGGAATTCAAGTATAGTTGGGAGACTTTTGGAATATGTCTATACCCATTGGGAACATCCATTGGATGCTCTGAGACACCAAACCAAAATCATGTTCAAAAACCTTCTCCAAATGCACCGGCTCACTGTGGAAGGTGCAGATTTCGTCCCTGATCCTTTCTTTGTGGAATTGACTGAGAGTCTTTTACGATTGGAATGGCATATTAAAGGAAAGTACACGTGCCTTGGTTGTTTGGTAGAGTGCATAGGAGTTGAACATATTTTGGCTATAGATAAAACTATTCCATCTCAAATCTTAGAGGTGATGGGAGACCAGTCATTGGTACCTTATGCAAGTGACCTCTTGGAAACCATGTTTAGAAATCATAAGAGTCATTTGAAATCCCAGACTGCTGAGAGTTCTTGGATTGACCAGTGGCATGAGACTTGGGTTTCTCCTCTCCTTTTTATATTGTGTGAAGGAAACTTGGATCAAAAATCTTACGTGATTGATTATTACTTGCCAAAATTATTAAGTTACAGCCCTGAAAGCTTACAGTACATGGTAAAGATTCTTCAGACTTCTATTGATGCTAAAACTGGACAAGAGCAATCTTTCCCATCCTTAGGGTCTTGTAATAGCAGGGGGGCTCTGGGAGCTTTGATGGCATGTCTGCGAATAGCTAGAGCTCATGGACATCTTCAGTCTGCAACTGATACCTGGGAGAACCTCGTGTCTGATGCAAGAATAAAGCAAGGCTTAATTCATCAGCATTGCCAAGTAAGGATAGATACATTAGGCTTGCTTTGTGAAAGTAATCGGAGCACAGAAATTGTTTCCATGGAAGAAATGCAGTGGATTCAGTTCTTTATTACATACAATCTTAACAGCCAGTCTCCAGGAGTGCGGCAACAGATCTGTTCTCTTCTTAAAAAG

CircID	chr2:43571707\|43590954
ORF Type	ORF2
Protein Length	69
Nucleotide Length	207
Protein Sequence	MHSTKQPRHVYFPLICHSNRKRLSVNSTKKGSGTKSAPSTVSRCIWRRFLNMILVWCLRASNGCSQWV*
Nucleotide Sequence	ATGCACTCTACCAAACAACCAAGGCACGTGTACTTTCCTTTAATATGCCATTCCAATCGTAAAAGACTCTCAGTCAATTCCACAAAGAAAGGATCAGGGACGAAATCTGCACCTTCCACAGTGAGCCGGTGCATTTGGAGAAGGTTTTTGAACATGATTTTGGTTTGGTGTCTCAGAGCATCCAATGGATGTTCCCAATGGGTATAG

CircID	chr2:43571707\|43590954
ORF Type	ORF3
Protein Length	57
Nucleotide Length	171
Protein Sequence	MAELVQDAKILDRNISSVGSLICELKVNKTCAVSKSRASPLRPMLPFCQSNMASVP*
Nucleotide Sequence	ATGGCTGAATTAGTCCAGGATGCTAAGATTCTAGACAGAAACATTTCCAGCGTTGGCTCTTTAATCTGTGAACTCAAGGTGAACAAAACATGTGCAGTATCCAAGAGCAGGGCCTCCCCACTCCGACCCATGCTTCCGTTCTGCCAGTCCAACATGGCAAGTGTCCCCTGA

CircID	chr2:43571707\|43590954
ORF Type	ORF4
Protein Length	40
Nucleotide Length	120
Protein Sequence	MDVPNGYRHIPKVSQLYLNSHSGCPLGSGNLIQGLVWLN*
Nucleotide Sequence	ATGGATGTTCCCAATGGGTATAGACATATTCCAAAAGTCTCCCAACTATACTTGAATTCCCATTCAGGCTGTCCGTTAGGCTCGGGGAACTTGATTCAAGGACTTGTATGGCTGAATTAG

CircID	chr2:43571707\|43590954
ORF Type	ORF5
Protein Length	38
Nucleotide Length	114
Protein Sequence	MYLSLLGNADELSLALFLHQTRGSPRYQLQTEDVHEL*
Nucleotide Sequence	ATGTATCTATCCTTACTTGGCAATGCTGATGAATTAAGCCTTGCTTTATTCTTGCATCAGACACGAGGTTCTCCCAGGTATCAGTTGCAGACTGAAGATGTCCATGAGCTCTAG

CircID	chr2:43571707\|43590954
ORF Type	ORF6
Protein Length	37
Nucleotide Length	111
Protein Sequence	MGESEVFQRFPWKSCTFCTNIIETLMPTSKSFINCV*
Nucleotide Sequence	ATGGGAGAATCGGAAGTCTTCCAAAGATTTCCCTGGAAATCTTGTACTTTCTGTACTAACATCATTGAAACTCTAATGCCTACCAGTAAGTCATTCATCAACTGTGTTTGA

CircID	chr2:43571707\|43590954
ORF Type	ORF7
Protein Length	35
Nucleotide Length	105
Protein Sequence	MPLVNPRTLSSLGFQMTLMISKHGFQEVTCIRYQ*
Nucleotide Sequence	ATGCCACTGGTCAATCCAAGAACTCTCAGCAGTCTGGGATTTCAAATGACTCTTATGATTTCTAAACATGGTTTCCAAGAGGTCACTTGCATAAGGTACCAATGA

CircID	chr2:43571707\|43590954
ORF Type	ORF8
Protein Length	34
Nucleotide Length	102
Protein Sequence	MKHIFKQIINTCSTQVKVLHTGRNIVSNFPVRV*
Nucleotide Sequence	ATGAAGCACATTTTTAAGCAGATTATTAACACTTGCTCTACCCAAGTTAAAGTTCTCCATACAGGAAGAAATATTGTCAGTAACTTTCCTGTAAGAGTATAA

CircID	chr2:43571707\|43590954
ORF Type	ORF9
Protein Length	32
Nucleotide Length	96
Protein Sequence	MSPQQRLLQLLINHSGTLVQSTERSSTLLIK*
Nucleotide Sequence	ATGTCACCACAACAGAGGCTCCTGCAGCTGCTCATAAACCACTCGGGGACACTGGTGCAGTCCACTGAACGAAGCAGCACACTGCTAATCAAATGA

CircID	chr2:43571707\|43590954
ORF Type	ORF10
Protein Length	31
Nucleotide Length	93
Protein Sequence	MCSIQEQGLPTPTHASVLPVQHGKCPLTEE*
Nucleotide Sequence	ATGTGCAGTATCCAAGAGCAGGGCCTCCCCACTCCGACCCATGCTTCCGTTCTGCCAGTCCAACATGGCAAGTGTCCCCTGACAGAGGAATAA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr2:43571707\|43590954	NOP56	2	0	0
chr2:43571707\|43590954	ELAVL1	2	4	5
chr2:43571707\|43590954	SF3B4	0	0	1
chr2:43571707\|43590954	SF3B1	0	0	1
chr2:43571707\|43590954	PRPF8	0	0	1
chr2:43571707\|43590954	YTHDF1	0	0	1
chr2:43571707\|43590954	UPF1	1	0	3
chr2:43571707\|43590954	FMR1	1	0	8
chr2:43571707\|43590954	FUS	0	1	0
chr2:43571707\|43590954	GNL3	0	0	1
chr2:43571707\|43590954	DGCR8	0	0	1
chr2:43571707\|43590954	SRSF7	0	0	1
chr2:43571707\|43590954	SRSF1	0	0	6
chr2:43571707\|43590954	NOP58	0	0	8
chr2:43571707\|43590954	U2AF1	0	0	2
chr2:43571707\|43590954	U2AF2	12	7	16
chr2:43571707\|43590954	SRSF9	0	0	1
chr2:43571707\|43590954	DDX54	0	0	18
chr2:43571707\|43590954	RBM10	1	0	0
chr2:43571707\|43590954	PTBP1	0	1	3
chr2:43571707\|43590954	HNRNPC	1	7	0
chr2:43571707\|43590954	HNRNPD	0	1	0
chr2:43571707\|43590954	DHX9	0	1	0
chr2:43571707\|43590954	ACIN1	0	0	4
chr2:43571707\|43590954	DDX3X	0	0	1
chr2:43571707\|43590954	LARP7	0	1	0
chr2:43571707\|43590954	MSI2	0	0	1
chr2:43571707\|43590954	HNRNPA1	0	1	1
chr2:43571707\|43590954	LIN28B	4	0	5
chr2:43571707\|43590954	FXR1	0	0	7
chr2:43571707\|43590954	FXR2	0	0	4
chr2:43571707\|43590954	SND1	0	0	1
chr2:43571707\|43590954	IGF2BP3	0	0	1
chr2:43571707\|43590954	IGF2BP2	1	3	17
chr2:43571707\|43590954	TARDBP	0	0	1
chr2:43571707\|43590954	YTHDF2	0	0	1
chr2:43571707\|43590954	RBM47	0	0	2
chr2:43571707\|43590954	CSTF2T	0	0	4
chr2:43571707\|43590954	WDR33	0	1	0
chr2:43571707\|43590954	FBL	2	0	10
chr2:43571707\|43590954	EIF4A3	2	1	26
chr2:43571707\|43590954	AGO2	1	0	4

CircRNA Information