CircRNA Information

General Information
circRNA Basic Information
CircID chr2:46903431|46903610
Strand +
CircType exon
Host Gene ENSG00000180398.10;
Algorism CIRI2;
Sequence CTTTACTCCAGTTCCCAACAAGTTCCTCATCTTCATCTGAGGCCACCTCAGCCTGGACTTTGTTGTCCATATTGCTATCAGCATTTGGGGCAAAGCCATTCAACAAGTCTGTAGGAAGTTCCAAACTTTCCCACATTTTCCTGTTTTCTTCTGAGCCCTCCAAACTGTTCCAGCCTCTGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr2:46903431|46903610 hsa-miR-135b-5p 0 0 1
chr2:46903431|46903610 hsa-miR-135b-3p 0 0 1
chr2:46903431|46903610 hsa-miR-561-5p 0 0 1
chr2:46903431|46903610 hsa-miR-561-3p 0 0 1
chr2:46903431|46903610 hsa-miR-570-5p 0 0 1
chr2:46903431|46903610 hsa-miR-570-3p 0 0 1
chr2:46903431|46903610 hsa-miR-653-5p 0 0 1
chr2:46903431|46903610 hsa-miR-653-3p 0 0 1
chr2:46903431|46903610 hsa-miR-1292-5p 0 0 1
chr2:46903431|46903610 hsa-miR-1292-3p 0 0 1
chr2:46903431|46903610 hsa-miR-485-5p 0 0 1
chr2:46903431|46903610 hsa-miR-299-3p 0 0 1
chr2:46903431|46903610 hsa-miR-105 0 0 1
chr2:46903431|46903610 hsa-miR-135a 0 0 1
chr2:46903431|46903610 hsa-miR-24 0 0 1
chr2:46903431|46903610 hsa-miR-768-5p 0 0 1
chr2:46903431|46903610 hsa-miR-762 1 0 0
chr2:46903431|46903610 hsa-miR-1270 1 0 0
chr2:46903431|46903610 hsa-miR-3138 0 1 0
chr2:46903431|46903610 hsa-miR-3154 1 0 0
chr2:46903431|46903610 hsa-miR-4298 1 0 0
chr2:46903431|46903610 hsa-miR-3929 0 1 0
chr2:46903431|46903610 hsa-miR-3945 1 0 0
chr2:46903431|46903610 hsa-miR-4437 1 1 0
chr2:46903431|46903610 hsa-miR-4471 0 1 0
chr2:46903431|46903610 hsa-miR-4656 1 0 0
chr2:46903431|46903610 hsa-miR-4689 1 0 0
chr2:46903431|46903610 hsa-miR-4721 1 1 0
chr2:46903431|46903610 hsa-miR-4784 1 0 0
chr2:46903431|46903610 hsa-miR-5787 1 0 0
chr2:46903431|46903610 hsa-miR-6081 1 0 0
chr2:46903431|46903610 hsa-miR-6086 1 0 0
chr2:46903431|46903610 hsa-miR-6088 1 0 0
chr2:46903431|46903610 hsa-miR-6127 1 0 0
chr2:46903431|46903610 hsa-miR-6134 1 1 0
chr2:46903431|46903610 hsa-miR-8052 1 0 0
chr2:46903431|46903610 hsa-miR-8059 0 1 0
chr2:46903431|46903610 hsa-miR-6894-5p 1 0 0
chr2:46903431|46903610 hsa-miR-125a-3p 1 0 0
chr2:46903431|46903610 hsa-miR-6515-5p 1 1 0
chr2:46903431|46903610 hsa-miR-6089 1 0 0
chr2:46903431|46903610 hsa-miR-4709-3p 1 0 0
chr2:46903431|46903610 hsa-miR-24-3p 1 1 0
chr2:46903431|46903610 hsa-miR-3928-3p 1 1 0
chr2:46903431|46903610 hsa-miR-7845-5p 1 0 0
chr2:46903431|46903610 hsa-miR-1224-5p 1 0 0
chr2:46903431|46903610 hsa-miR-2467-3p 0 1 0
chr2:46903431|46903610 hsa-miR-6782-5p 1 0 0
chr2:46903431|46903610 hsa-miR-5088-5p 1 1 0
chr2:46903431|46903610 hsa-miR-6847-5p 1 0 0
chr2:46903431|46903610 hsa-miR-7854-3p 1 0 0
chr2:46903431|46903610 hsa-miR-6834-5p 1 0 0
chr2:46903431|46903610 hsa-miR-4446-3p 1 0 0
chr2:46903431|46903610 hsa-miR-3616-3p 1 0 0
chr2:46903431|46903610 hsa-miR-6886-5p 1 0 0
chr2:46903431|46903610 hsa-miR-4776-5p 1 0 0
chr2:46903431|46903610 hsa-miR-7162-3p 0 1 0
chr2:46903431|46903610 hsa-miR-6866-5p 1 1 0
chr2:46903431|46903610 hsa-miR-6826-5p 1 0 0
chr2:46903431|46903610 hsa-miR-3065-5p 0 1 0
chr2:46903431|46903610 hsa-miR-3158-3p 1 0 0
chr2:46903431|46903610 hsa-miR-576-3p 0 1 0
chr2:46903431|46903610 hsa-miR-135a-5p 0 1 0
chr2:46903431|46903610 hsa-miR-6505-5p 1 0 0
chr2:46903431|46903610 hsa-miR-499b-5p 0 1 0
chr2:46903431|46903610 hsa-miR-372-5p 0 1 0
chr2:46903431|46903610 hsa-miR-1207-5p 1 0 0
chr2:46903431|46903610 hsa-miR-6812-5p 1 1 0
chr2:46903431|46903610 hsa-miR-6865-5p 1 1 0
chr2:46903431|46903610 hsa-miR-5001-5p 1 0 0
chr2:46903431|46903610 hsa-miR-6737-5p 1 0 0
chr2:46903431|46903610 hsa-miR-6743-5p 1 0 0
chr2:46903431|46903610 hsa-miR-6813-5p 1 0 0
chr2:46903431|46903610 hsa-miR-6815-5p 0 1 0
chr2:46903431|46903610 hsa-miR-10401-5p 1 1 0
chr2:46903431|46903610 hsa-miR-1249-5p 1 0 0
chr2:46903431|46903610 hsa-miR-6780a-5p 1 0 0
chr2:46903431|46903610 hsa-miR-6797-5p 1 0 0
chr2:46903431|46903610 hsa-miR-6875-5p 1 0 0
chr2:46903431|46903610 hsa-miR-3620-5p 1 0 0
chr2:46903431|46903610 hsa-miR-10396a-5p 1 0 0
chr2:46903431|46903610 hsa-miR-328-5p 1 0 0
chr2:46903431|46903610 hsa-miR-4749-5p 1 0 0
chr2:46903431|46903610 hsa-miR-6738-5p 0 1 0
chr2:46903431|46903610 hsa-miR-6846-5p 1 0 0
chr2:46903431|46903610 hsa-miR-6848-5p 1 0 0
chr2:46903431|46903610 hsa-miR-6858-5p 1 0 0
chr2:46903431|46903610 hsa-miR-365a-5p 1 0 0
chr2:46903431|46903610 hsa-miR-7151-3p 1 0 0
chr2:46903431|46903610 hsa-miR-4716-3p 1 0 0
chr2:46903431|46903610 hsa-miR-6785-5p 1 0 0
chr2:46903431|46903610 hsa-miR-6859-5p 1 0 0
chr2:46903431|46903610 hsa-miR-6884-5p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr2:46903431|46903610
ORF Type ORF1
Protein Length 25
Nucleotide Length 78
Protein Sequence MRPPQPGLCCPYCYQHLGQSHSTSL
Nucleotide Sequence CTGAGGCCACCTCAGCCTGGACTTTGTTGTCCATATTGCTATCAGCATTTGGGGCAAAGCCATTCAACAAGTCTGTAG
CircID chr2:46903431|46903610
ORF Type ORF2
Protein Length 33
Nucleotide Length 102
Protein Sequence MDFVVHIAISIWGKAIQQVCRKFQTFPHFPVFF
Nucleotide Sequence CTGGACTTTGTTGTCCATATTGCTATCAGCATTTGGGGCAAAGCCATTCAACAAGTCTGTAGGAAGTTCCAAACTTTCCCACATTTTCCTGTTTTCTTCTGA
CircID chr2:46903431|46903610
ORF Type ORF3
Protein Length 40
Nucleotide Length 120
Protein Sequence MLSILLSAFGAKPFNKSVGSSKLSHIFLFSSEPSKLFQPL
Nucleotide Sequence TTGTTGTCCATATTGCTATCAGCATTTGGGGCAAAGCCATTCAACAAGTCTGTAGGAAGTTCCAAACTTTCCCACATTTTCCTGTTTTCTTCTGAGCCCTCCAAACTGTTCCAGCCTCTG
CircID chr2:46903431|46903610
ORF Type ORF4
Protein Length 33
Nucleotide Length 99
Protein Sequence MALPQMLIAIWTTKSRLRWPQMKMRNLLGTGVK
Nucleotide Sequence ATGGCTTTGCCCCAAATGCTGATAGCAATATGGACAACAAAGTCCAGGCTGAGGTGGCCTCAGATGAAGATGAGGAACTTGTTGGGAACTGGAGTAAAG
CircID chr2:46903431|46903610
ORF Type ORF5
Protein Length 31
Nucleotide Length 96
Protein Sequence MEQFGGLRRKQENVGKFGTSYRLVEWLCPKC
Nucleotide Sequence CTGGAACAGTTTGGAGGGCTCAGAAGAAAACAGGAAAATGTGGGAAAGTTTGGAACTTCCTACAGACTTGTTGAATGGCTTTGCCCCAAATGCTGA
CircID chr2:46903431|46903610
ORF Type ORF6
Protein Length 54
Nucleotide Length 162
Protein Sequence MEGSEENRKMWESLELPTDLLNGFAPNADSNMDNKVQAEVASDEDEELVGNWSK
Nucleotide Sequence TTGGAGGGCTCAGAAGAAAACAGGAAAATGTGGGAAAGTTTGGAACTTCCTACAGACTTGTTGAATGGCTTTGCCCCAAATGCTGATAGCAATATGGACAACAAAGTCCAGGCTGAGGTGGCCTCAGATGAAGATGAGGAACTTGTTGGGAACTGGAGTAAA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab