CircRNA Information

General Information
circRNA Basic Information
CircID chr2:54648986|54649142
Strand +
CircType exon
Host Gene ENSG00000115306.14;
Algorism CIRI2;
Sequence CTCCCTCTCAGCGATCCACTGCTCCAGGTCGTCCACCTCCCGGTTGAGCTGGAATAACCTGTGTCTCTCATCCAGCTTGCCTCTTCTCTCTTCAGCAAGGTCTTTCAGACCAGCGTACAGTTTATCCACTTTGGACTGCCGCATGCTAATGCGCTCA
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr2:54648986|54649142 hsa-miR-154-5p 0 0 1
chr2:54648986|54649142 hsa-miR-154-3p 0 0 1
chr2:54648986|54649142 hsa-miR-520g-5p 0 0 1
chr2:54648986|54649142 hsa-miR-520g-3p 0 0 1
chr2:54648986|54649142 hsa-miR-520h 0 0 1
chr2:54648986|54649142 hsa-miR-619-5p 0 0 1
chr2:54648986|54649142 hsa-miR-619-3p 0 0 1
chr2:54648986|54649142 hsa-miR-631 0 0 1
chr2:54648986|54649142 hsa-miR-1287-5p 0 0 1
chr2:54648986|54649142 hsa-miR-1287-3p 0 0 1
chr2:54648986|54649142 hsa-miR-1253 0 0 1
chr2:54648986|54649142 hsa-miR-1255a 0 0 1
chr2:54648986|54649142 hsa-miR-548g-5p 0 0 1
chr2:54648986|54649142 hsa-miR-548g-3p 0 0 1
chr2:54648986|54649142 hsa-miR-1261 0 0 1
chr2:54648986|54649142 hsa-miR-339-3p 0 0 1
chr2:54648986|54649142 hsa-miR-628-5p 0 0 1
chr2:54648986|54649142 hsa-miR-455-3p 0 1 1
chr2:54648986|54649142 hsa-miR-1255b 0 0 1
chr2:54648986|54649142 hsa-miR-650 1 0 0
chr2:54648986|54649142 hsa-miR-2278 1 0 0
chr2:54648986|54649142 hsa-miR-2861 1 0 0
chr2:54648986|54649142 hsa-miR-3138 1 0 0
chr2:54648986|54649142 hsa-miR-3154 1 0 0
chr2:54648986|54649142 hsa-miR-320e 0 1 0
chr2:54648986|54649142 hsa-miR-4306 1 0 0
chr2:54648986|54649142 hsa-miR-4321 1 0 0
chr2:54648986|54649142 hsa-miR-3661 1 0 0
chr2:54648986|54649142 hsa-miR-4429 1 0 0
chr2:54648986|54649142 hsa-miR-4430 1 0 0
chr2:54648986|54649142 hsa-miR-3135b 1 1 0
chr2:54648986|54649142 hsa-miR-4487 1 0 0
chr2:54648986|54649142 hsa-miR-4489 1 0 0
chr2:54648986|54649142 hsa-miR-4537 1 0 0
chr2:54648986|54649142 hsa-miR-4644 1 0 0
chr2:54648986|54649142 hsa-miR-4688 1 0 0
chr2:54648986|54649142 hsa-miR-4689 1 0 0
chr2:54648986|54649142 hsa-miR-4706 1 0 0
chr2:54648986|54649142 hsa-miR-4784 1 0 0
chr2:54648986|54649142 hsa-miR-5090 1 0 0
chr2:54648986|54649142 hsa-miR-5739 1 0 0
chr2:54648986|54649142 hsa-miR-6081 1 1 0
chr2:54648986|54649142 hsa-miR-6131 0 1 0
chr2:54648986|54649142 hsa-miR-8085 1 0 0
chr2:54648986|54649142 hsa-miR-4433b-3p 1 0 0
chr2:54648986|54649142 hsa-miR-671-5p 1 0 0
chr2:54648986|54649142 hsa-miR-7106-5p 1 0 0
chr2:54648986|54649142 hsa-miR-6825-5p 1 0 0
chr2:54648986|54649142 hsa-miR-6799-5p 1 1 0
chr2:54648986|54649142 hsa-miR-6510-5p 1 0 0
chr2:54648986|54649142 hsa-miR-8071 1 1 0
chr2:54648986|54649142 hsa-miR-6833-5p 1 0 0
chr2:54648986|54649142 hsa-miR-6089 1 0 0
chr2:54648986|54649142 hsa-miR-3192-5p 1 0 0
chr2:54648986|54649142 hsa-miR-6880-5p 1 0 0
chr2:54648986|54649142 hsa-miR-7847-3p 1 0 0
chr2:54648986|54649142 hsa-miR-4695-5p 1 0 0
chr2:54648986|54649142 hsa-miR-6746-5p 1 0 0
chr2:54648986|54649142 hsa-miR-4709-3p 0 1 0
chr2:54648986|54649142 hsa-miR-4655-5p 1 0 0
chr2:54648986|54649142 hsa-miR-197-5p 1 0 0
chr2:54648986|54649142 hsa-miR-432-5p 1 0 0
chr2:54648986|54649142 hsa-miR-6760-5p 1 1 0
chr2:54648986|54649142 hsa-miR-2467-3p 1 0 0
chr2:54648986|54649142 hsa-miR-6782-5p 1 0 0
chr2:54648986|54649142 hsa-miR-30b-3p 1 1 0
chr2:54648986|54649142 hsa-miR-185-5p 1 0 0
chr2:54648986|54649142 hsa-miR-3691-5p 0 1 0
chr2:54648986|54649142 hsa-miR-877-5p 1 0 0
chr2:54648986|54649142 hsa-miR-485-5p 1 0 0
chr2:54648986|54649142 hsa-miR-3202 1 0 0
chr2:54648986|54649142 hsa-miR-4743-5p 1 0 0
chr2:54648986|54649142 hsa-miR-4787-5p 1 0 0
chr2:54648986|54649142 hsa-miR-149-3p 1 0 0
chr2:54648986|54649142 hsa-miR-6869-5p 1 0 0
chr2:54648986|54649142 hsa-miR-525-5p 0 1 0
chr2:54648986|54649142 hsa-miR-3681-5p 0 1 0
chr2:54648986|54649142 hsa-miR-4766-5p 0 1 0
chr2:54648986|54649142 hsa-miR-4763-3p 1 0 0
chr2:54648986|54649142 hsa-miR-6769b-5p 1 0 0
chr2:54648986|54649142 hsa-miR-6865-5p 1 0 0
chr2:54648986|54649142 hsa-miR-6893-5p 1 0 0
chr2:54648986|54649142 hsa-miR-6726-5p 1 0 0
chr2:54648986|54649142 hsa-miR-6737-5p 1 0 0
chr2:54648986|54649142 hsa-miR-6743-5p 1 0 0
chr2:54648986|54649142 hsa-miR-6752-5p 1 0 0
chr2:54648986|54649142 hsa-miR-6754-5p 1 0 0
chr2:54648986|54649142 hsa-miR-6803-5p 1 0 0
chr2:54648986|54649142 hsa-miR-6815-5p 1 0 0
chr2:54648986|54649142 hsa-miR-6819-5p 1 0 0
chr2:54648986|54649142 hsa-miR-6851-5p 1 1 0
chr2:54648986|54649142 hsa-miR-7107-5p 1 1 0
chr2:54648986|54649142 hsa-miR-6780a-5p 1 0 0
chr2:54648986|54649142 hsa-miR-6788-5p 1 0 0
chr2:54648986|54649142 hsa-miR-6797-5p 1 0 0
chr2:54648986|54649142 hsa-miR-6862-5p 1 0 0
chr2:54648986|54649142 hsa-miR-1909-3p 1 0 0
chr2:54648986|54649142 hsa-miR-3689a-3p 1 0 0
chr2:54648986|54649142 hsa-miR-449c-5p 1 0 0
chr2:54648986|54649142 hsa-miR-6735-5p 1 0 0
chr2:54648986|54649142 hsa-miR-6846-5p 1 0 0
chr2:54648986|54649142 hsa-miR-6858-5p 1 0 0
chr2:54648986|54649142 hsa-miR-939-5p 1 0 0
chr2:54648986|54649142 hsa-miR-6511a-5p 1 0 0
chr2:54648986|54649142 hsa-miR-6758-5p 1 0 0
chr2:54648986|54649142 hsa-miR-6856-5p 1 0 0
chr2:54648986|54649142 hsa-miR-4646-5p 1 0 0
chr2:54648986|54649142 hsa-miR-6750-5p 1 0 0
chr2:54648986|54649142 hsa-miR-6785-5p 1 0 0
chr2:54648986|54649142 hsa-miR-6849-5p 0 1 0
chr2:54648986|54649142 hsa-miR-320a-3p 1 0 0
chr2:54648986|54649142 hsa-miR-320b 1 0 0
chr2:54648986|54649142 hsa-miR-320c 1 0 0
chr2:54648986|54649142 hsa-miR-320d 1 0 0
chr2:54648986|54649142 hsa-miR-7161-5p 1 0 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr2:54648986|54649142
ORF Type ORF1
Protein Length 38
Nucleotide Length 114
Protein Sequence MSWNNLCLSSSLPLLSSARSFRPAYSLSTLDCRMLMRS
Nucleotide Sequence TTGAGCTGGAATAACCTGTGTCTCTCATCCAGCTTGCCTCTTCTCTCTTCAGCAAGGTCTTTCAGACCAGCGTACAGTTTATCCACTTTGGACTGCCGCATGCTAATGCGCTCA
CircID chr2:54648986|54649142
ORF Type ORF2
Protein Length 48
Nucleotide Length 144
Protein Sequence MRQSKVDKLYAGLKDLAEERRGKLDERHRLFQLNREVDDLEQWIAERE
Nucleotide Sequence ATGCGGCAGTCCAAAGTGGATAAACTGTACGCTGGTCTGAAAGACCTTGCTGAAGAGAGAAGAGGCAAGCTGGATGAGAGACACAGGTTATTCCAGCTCAACCGGGAGGTGGACGACCTGGAGCAGTGGATCGCTGAGAGGGAG
CircID chr2:54648986|54649142
ORF Type ORF3
Protein Length 32
Nucleotide Length 96
Protein Sequence MLKREEASWMRDTGYSSSTGRWTTWSSGSLRG
Nucleotide Sequence TTGCTGAAGAGAGAAGAGGCAAGCTGGATGAGAGACACAGGTTATTCCAGCTCAACCGGGAGGTGGACGACCTGGAGCAGTGGATCGCTGAGAGGG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab