CircNet

General Information

circRNA Basic Information

CircID	chr2:55339464\|55374883
Strand	-
CircType	exon
Host Gene	ENSG00000115355.15;
Algorism	find_circ;CIRI2;DCC;
Sequence	CACCCCAGAAATCCCTGGGCCATGAGGTGAATGAGTTGACATCAAGTAGATTATTGAAGCTAGAGATGGAAAATCAAAGTTTGACAAAAACCGTAGAAGAGCTTCGGACTACTGTGGATTCTGTAGAAGGCAATGCTTCCAAAATCCTGAAAATGGAAAAAGAAAATCAAAGGCTCAGTAAAAAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr2:55339464\|55374883
ORF Type	ORF1
Protein Length	40
Nucleotide Length	120
Protein Sequence	MENQSLTKTVEELRTTVDSVEGNASKILKMEKENQRLSKK
Nucleotide Sequence	ATGGAAAATCAAAGTTTGACAAAAACCGTAGAAGAGCTTCGGACTACTGTGGATTCTGTAGAAGGCAATGCTTCCAAAATCCTGAAAATGGAAAAAGAAAATCAAAGGCTCAGTAAAAAG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr2:55339464\|55374883	NOP56	1	1	0
chr2:55339464\|55374883	ELAVL1	4	12	0
chr2:55339464\|55374883	FAM120A	1	0	0
chr2:55339464\|55374883	TBRG4	1	0	0
chr2:55339464\|55374883	CPSF7	0	1	0
chr2:55339464\|55374883	TAF15	0	1	0
chr2:55339464\|55374883	FMR1	0	0	2
chr2:55339464\|55374883	CPSF6	0	0	1
chr2:55339464\|55374883	CPSF4	1	0	0
chr2:55339464\|55374883	FUS	0	1	0
chr2:55339464\|55374883	NOP58	0	1	2
chr2:55339464\|55374883	CSTF2	0	18	0
chr2:55339464\|55374883	U2AF2	11	7	1
chr2:55339464\|55374883	SF3A3	2	0	0
chr2:55339464\|55374883	PTBP1	0	1	0
chr2:55339464\|55374883	HNRNPC	17	29	3
chr2:55339464\|55374883	TRA2A	0	0	3
chr2:55339464\|55374883	ZNF184	0	0	2
chr2:55339464\|55374883	HNRNPA1	2	3	0
chr2:55339464\|55374883	DDX3X	2	0	0
chr2:55339464\|55374883	SMNDC1	2	0	0
chr2:55339464\|55374883	ACIN1	0	0	1
chr2:55339464\|55374883	LIN28B	0	1	1
chr2:55339464\|55374883	RANGAP1	0	0	1
chr2:55339464\|55374883	FXR1	0	0	1
chr2:55339464\|55374883	FXR2	0	0	3
chr2:55339464\|55374883	IGF2BP2	4	2	4
chr2:55339464\|55374883	NPM1	1	0	0
chr2:55339464\|55374883	TARDBP	0	4	1
chr2:55339464\|55374883	BUD13	1	0	1
chr2:55339464\|55374883	RBM47	1	1	0
chr2:55339464\|55374883	DDX42	1	0	0
chr2:55339464\|55374883	CSTF2T	0	3	0
chr2:55339464\|55374883	SAFB2	0	1	1
chr2:55339464\|55374883	AGO2	0	0	1
chr2:55339464\|55374883	EIF4A3	2	1	2
chr2:55339464\|55374883	FBL	0	1	1

CircRNA Information