CircNet

General Information

circRNA Basic Information

CircID	chr2:61350260\|61350693
Strand	-
CircType	exon
Host Gene	ENSG00000115464.14;
Algorism	find_circ;CIRI2;DCC;
Sequence	TTGAAACATTGTAGTCGGTATATACATGACTTATTTCCTTCACTCATCAAGAATTTGGATCCCGTACCACTTAGACATCTACTTAATCTGGTCTCAGCTCTTGAGCCAAGTGTTCATACTGAACAGACACTGTACTTGGCATCCATGTTAATTAAAGCACTGTGGAATAACGCACTAGCAGCTAAGGCTCAGTTATCTAAACAGAGTTCTTTTGCATCTTTATTAAATACTAATATTCCCATTGGAAATAAGAAAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr2:61350260\|61350693	hsa-miR-124-5p	0	1	1
chr2:61350260\|61350693	hsa-miR-24-3p	0	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr2:61350260\|61350693
ORF Type	ORF1
Protein Length	42
Nucleotide Length	126
Protein Sequence	MTYFLHSSRIWIPYHLDIYLIWSQLLSQVFILNRHCTWHPC*
Nucleotide Sequence	ATGACTTATTTCCTTCACTCATCAAGAATTTGGATCCCGTACCACTTAGACATCTACTTAATCTGGTCTCAGCTCTTGAGCCAAGTGTTCATACTGAACAGACACTGTACTTGGCATCCATGTTAA

CircID	chr2:61350260\|61350693
ORF Type	ORF2
Protein Length	37
Nucleotide Length	111
Protein Sequence	MLIKALWNNALAAKAQLSKQSSFASLLNTNIPIGNKK
Nucleotide Sequence	ATGTTAATTAAAGCACTGTGGAATAACGCACTAGCAGCTAAGGCTCAGTTATCTAAACAGAGTTCTTTTGCATCTTTATTAAATACTAATATTCCCATTGGAAATAAGAAA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr2:61350260\|61350693	NOP56	1	0	0
chr2:61350260\|61350693	ELAVL1	7	5	0
chr2:61350260\|61350693	SF3B4	2	0	0
chr2:61350260\|61350693	FAM120A	0	1	0
chr2:61350260\|61350693	PRPF8	0	2	0
chr2:61350260\|61350693	UPF1	0	1	0
chr2:61350260\|61350693	TNRC6A	0	1	0
chr2:61350260\|61350693	FMR1	0	1	0
chr2:61350260\|61350693	DGCR8	0	0	3
chr2:61350260\|61350693	SRSF7	1	1	0
chr2:61350260\|61350693	SRSF1	0	7	0
chr2:61350260\|61350693	NOP58	2	2	3
chr2:61350260\|61350693	U2AF1	4	2	0
chr2:61350260\|61350693	U2AF2	27	5	2
chr2:61350260\|61350693	SRSF9	0	0	1
chr2:61350260\|61350693	DDX54	0	0	7
chr2:61350260\|61350693	RBM10	0	2	0
chr2:61350260\|61350693	SF3A3	1	0	0
chr2:61350260\|61350693	PTBP1	0	0	1
chr2:61350260\|61350693	HNRNPC	2	3	0
chr2:61350260\|61350693	TRA2A	0	7	0
chr2:61350260\|61350693	ZNF184	0	0	2
chr2:61350260\|61350693	HNRNPA1	0	1	0
chr2:61350260\|61350693	XRN2	0	1	0
chr2:61350260\|61350693	LARP7	0	2	0
chr2:61350260\|61350693	SMNDC1	0	4	0
chr2:61350260\|61350693	MSI2	0	0	1
chr2:61350260\|61350693	ACIN1	0	0	4
chr2:61350260\|61350693	RANGAP1	1	1	0
chr2:61350260\|61350693	FXR1	0	3	1
chr2:61350260\|61350693	IGF2BP1	1	0	6
chr2:61350260\|61350693	GTF2F1	0	1	0
chr2:61350260\|61350693	IGF2BP3	0	2	4
chr2:61350260\|61350693	IGF2BP2	0	1	11
chr2:61350260\|61350693	BUD13	0	2	2
chr2:61350260\|61350693	RBFOX2	0	3	0
chr2:61350260\|61350693	RBM47	1	0	2
chr2:61350260\|61350693	SLTM	0	1	0
chr2:61350260\|61350693	CSTF2T	0	0	2
chr2:61350260\|61350693	RBM22	0	2	0
chr2:61350260\|61350693	TIAL1	1	0	0
chr2:61350260\|61350693	FBL	0	0	2
chr2:61350260\|61350693	EIF4A3	1	8	4
chr2:61350260\|61350693	AGO2	2	0	2

CircRNA Information