CircRNA Information

General Information
circRNA Basic Information
CircID chr2:68392477|68392641
Strand -
CircType exon
Host Gene
Algorism CIRI2;
Sequence CCTGCCTTTTATTTCCACTAAATCTCTGTCCACTTTTCCCACCTTGCCTCTGCTACTCTTCATGAACCCTACATTCTAGCCAGACTGGTCTTATTCATCAACACCTGAGTATGTCTCTTGCATTCCCACTTCTGCTCTTGTGTTGTCAGTTGTCCTCCTACCCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr2:68392477|68392641 hsa-miR-149-5p 0 0 1
chr2:68392477|68392641 hsa-miR-149-3p 0 0 1
chr2:68392477|68392641 hsa-miR-335-5p 0 0 1
chr2:68392477|68392641 hsa-miR-335-3p 0 0 1
chr2:68392477|68392641 hsa-miR-433-5p 0 0 1
chr2:68392477|68392641 hsa-miR-433-3p 0 0 1
chr2:68392477|68392641 hsa-miR-510-5p 0 0 1
chr2:68392477|68392641 hsa-miR-510-3p 0 0 1
chr2:68392477|68392641 hsa-miR-622 0 1 1
chr2:68392477|68392641 hsa-miR-298 1 1 1
chr2:68392477|68392641 hsa-miR-940 0 0 1
chr2:68392477|68392641 hsa-miR-1206 0 0 1
chr2:68392477|68392641 hsa-miR-512-5p 0 0 1
chr2:68392477|68392641 hsa-miR-125a-3p 0 0 1
chr2:68392477|68392641 hsa-miR-296-3p 1 0 1
chr2:68392477|68392641 hsa-miR-549 0 0 1
chr2:68392477|68392641 hsa-miR-184 1 0 0
chr2:68392477|68392641 hsa-miR-658 1 0 0
chr2:68392477|68392641 hsa-miR-300 0 1 0
chr2:68392477|68392641 hsa-miR-936 1 0 0
chr2:68392477|68392641 hsa-miR-1183 1 0 0
chr2:68392477|68392641 hsa-miR-3132 1 0 0
chr2:68392477|68392641 hsa-miR-3138 1 1 0
chr2:68392477|68392641 hsa-miR-3141 1 0 0
chr2:68392477|68392641 hsa-miR-3153 1 0 0
chr2:68392477|68392641 hsa-miR-3154 1 0 0
chr2:68392477|68392641 hsa-miR-3170 1 0 0
chr2:68392477|68392641 hsa-miR-4257 1 0 0
chr2:68392477|68392641 hsa-miR-4270 1 0 0
chr2:68392477|68392641 hsa-miR-4271 1 0 0
chr2:68392477|68392641 hsa-miR-3612 1 0 0
chr2:68392477|68392641 hsa-miR-3652 1 0 0
chr2:68392477|68392641 hsa-miR-3665 1 0 0
chr2:68392477|68392641 hsa-miR-4430 1 0 0
chr2:68392477|68392641 hsa-miR-4458 1 0 0
chr2:68392477|68392641 hsa-miR-4462 1 0 0
chr2:68392477|68392641 hsa-miR-4468 0 1 0
chr2:68392477|68392641 hsa-miR-4514 1 0 0
chr2:68392477|68392641 hsa-miR-4516 1 0 0
chr2:68392477|68392641 hsa-miR-3960 1 0 0
chr2:68392477|68392641 hsa-miR-4654 1 0 0
chr2:68392477|68392641 hsa-miR-4656 1 0 0
chr2:68392477|68392641 hsa-miR-4688 1 0 0
chr2:68392477|68392641 hsa-miR-4689 1 0 0
chr2:68392477|68392641 hsa-miR-4739 1 0 0
chr2:68392477|68392641 hsa-miR-4779 1 0 0
chr2:68392477|68392641 hsa-miR-5186 1 0 0
chr2:68392477|68392641 hsa-miR-5192 1 0 0
chr2:68392477|68392641 hsa-miR-6086 1 0 0
chr2:68392477|68392641 hsa-miR-6124 1 1 0
chr2:68392477|68392641 hsa-miR-6860 1 0 0
chr2:68392477|68392641 hsa-miR-7150 1 0 0
chr2:68392477|68392641 hsa-miR-8060 1 1 0
chr2:68392477|68392641 hsa-miR-12114 1 0 0
chr2:68392477|68392641 hsa-miR-12115 1 1 0
chr2:68392477|68392641 hsa-miR-4433b-3p 1 0 0
chr2:68392477|68392641 hsa-miR-92a-2-5p 1 0 0
chr2:68392477|68392641 hsa-miR-6809-5p 1 1 0
chr2:68392477|68392641 hsa-miR-4433a-3p 1 1 0
chr2:68392477|68392641 hsa-miR-6825-5p 1 0 0
chr2:68392477|68392641 hsa-miR-6510-5p 1 0 0
chr2:68392477|68392641 hsa-miR-8071 1 0 0
chr2:68392477|68392641 hsa-miR-1236-5p 1 0 0
chr2:68392477|68392641 hsa-miR-5187-5p 1 0 0
chr2:68392477|68392641 hsa-miR-3934-5p 0 1 0
chr2:68392477|68392641 hsa-miR-6089 1 0 0
chr2:68392477|68392641 hsa-miR-4695-5p 1 0 0
chr2:68392477|68392641 hsa-miR-6746-5p 1 0 0
chr2:68392477|68392641 hsa-miR-4722-5p 1 0 0
chr2:68392477|68392641 hsa-miR-3677-5p 1 0 0
chr2:68392477|68392641 hsa-miR-6730-5p 1 0 0
chr2:68392477|68392641 hsa-miR-7154-3p 1 1 0
chr2:68392477|68392641 hsa-miR-197-5p 1 0 0
chr2:68392477|68392641 hsa-miR-6716-5p 1 0 0
chr2:68392477|68392641 hsa-miR-3151-5p 1 0 0
chr2:68392477|68392641 hsa-miR-1292-5p 1 0 0
chr2:68392477|68392641 hsa-miR-6748-5p 0 1 0
chr2:68392477|68392641 hsa-miR-6796-5p 1 1 0
chr2:68392477|68392641 hsa-miR-23a-5p 1 0 0
chr2:68392477|68392641 hsa-miR-6798-5p 1 0 0
chr2:68392477|68392641 hsa-miR-6760-5p 1 0 0
chr2:68392477|68392641 hsa-miR-2467-3p 1 1 0
chr2:68392477|68392641 hsa-miR-6810-5p 1 0 0
chr2:68392477|68392641 hsa-miR-5088-5p 1 0 0
chr2:68392477|68392641 hsa-miR-1229-5p 1 1 0
chr2:68392477|68392641 hsa-miR-4640-5p 1 0 0
chr2:68392477|68392641 hsa-miR-885-3p 1 0 0
chr2:68392477|68392641 hsa-miR-6847-5p 1 0 0
chr2:68392477|68392641 hsa-miR-6717-5p 1 0 0
chr2:68392477|68392641 hsa-miR-6824-5p 1 0 0
chr2:68392477|68392641 hsa-miR-6802-5p 1 0 0
chr2:68392477|68392641 hsa-miR-4800-5p 1 0 0
chr2:68392477|68392641 hsa-miR-4776-5p 1 0 0
chr2:68392477|68392641 hsa-miR-6866-5p 1 0 0
chr2:68392477|68392641 hsa-miR-6869-5p 1 0 0
chr2:68392477|68392641 hsa-miR-423-5p 1 0 0
chr2:68392477|68392641 hsa-miR-7846-3p 1 0 0
chr2:68392477|68392641 hsa-miR-654-5p 1 0 0
chr2:68392477|68392641 hsa-miR-4727-3p 0 1 0
chr2:68392477|68392641 hsa-miR-6801-5p 1 0 0
chr2:68392477|68392641 hsa-miR-4796-3p 1 1 0
chr2:68392477|68392641 hsa-miR-4520-2-3p 1 0 0
chr2:68392477|68392641 hsa-miR-4520-3p 1 0 0
chr2:68392477|68392641 hsa-miR-1207-5p 1 0 0
chr2:68392477|68392641 hsa-miR-1233-5p 1 1 0
chr2:68392477|68392641 hsa-miR-4763-3p 1 0 0
chr2:68392477|68392641 hsa-miR-6769b-5p 1 1 0
chr2:68392477|68392641 hsa-miR-6778-5p 1 1 0
chr2:68392477|68392641 hsa-miR-6865-5p 1 0 0
chr2:68392477|68392641 hsa-miR-6893-5p 1 0 0
chr2:68392477|68392641 hsa-miR-6743-5p 1 0 0
chr2:68392477|68392641 hsa-miR-6756-5p 1 0 0
chr2:68392477|68392641 hsa-miR-6769a-5p 1 0 0
chr2:68392477|68392641 hsa-miR-6851-5p 1 0 0
chr2:68392477|68392641 hsa-miR-10401-5p 1 0 0
chr2:68392477|68392641 hsa-miR-1249-5p 1 0 0
chr2:68392477|68392641 hsa-miR-6722-3p 1 1 0
chr2:68392477|68392641 hsa-miR-6780a-5p 1 0 0
chr2:68392477|68392641 hsa-miR-6788-5p 1 0 0
chr2:68392477|68392641 hsa-miR-6797-5p 1 0 0
chr2:68392477|68392641 hsa-miR-6808-5p 1 0 0
chr2:68392477|68392641 hsa-miR-6879-5p 1 0 0
chr2:68392477|68392641 hsa-miR-6780b-5p 1 0 0
chr2:68392477|68392641 hsa-miR-1909-3p 1 0 0
chr2:68392477|68392641 hsa-miR-4632-5p 1 0 0
chr2:68392477|68392641 hsa-miR-6735-5p 1 0 0
chr2:68392477|68392641 hsa-miR-675-5p 1 0 0
chr2:68392477|68392641 hsa-miR-6794-5p 1 0 0
chr2:68392477|68392641 hsa-miR-6858-5p 1 0 0
chr2:68392477|68392641 hsa-miR-6883-5p 1 0 0
chr2:68392477|68392641 hsa-miR-3187-5p 1 0 0
chr2:68392477|68392641 hsa-miR-4769-5p 1 0 0
chr2:68392477|68392641 hsa-miR-6511a-5p 1 0 0
chr2:68392477|68392641 hsa-miR-6856-5p 1 0 0
chr2:68392477|68392641 hsa-miR-4665-5p 1 0 0
chr2:68392477|68392641 hsa-miR-6855-5p 1 0 0
chr2:68392477|68392641 hsa-miR-3173-3p 1 0 0
chr2:68392477|68392641 hsa-miR-3679-5p 1 0 0
chr2:68392477|68392641 hsa-miR-541-3p 1 0 0
chr2:68392477|68392641 hsa-miR-6766-5p 1 0 0
chr2:68392477|68392641 hsa-miR-6849-5p 1 0 0
chr2:68392477|68392641 hsa-miR-6718-5p 1 0 0
chr2:68392477|68392641 hsa-miR-664a-5p 0 1 0
chr2:68392477|68392641 hsa-miR-6838-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr2:68392477|68392641
ORF Type ORF1
Protein Length 25
Nucleotide Length 78
Protein Sequence LPFISTKSLSTFPTLPLLLFMNPTF
Nucleotide Sequence CTGCCTTTTATTTCCACTAAATCTCTGTCCACTTTTCCCACCTTGCCTCTGCTACTCTTCATGAACCCTACATTCTAG
CircID chr2:68392477|68392641
ORF Type ORF2
Protein Length 26
Nucleotide Length 81
Protein Sequence MTTQEQKWECKRHTQVLMNKTSLARM
Nucleotide Sequence CTGACAACACAAGAGCAGAAGTGGGAATGCAAGAGACATACTCAGGTGTTGATGAATAAGACCAGTCTGGCTAGAATGTAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab