CircRNA Information

General Information
circRNA Basic Information
CircID chr2:69013181|69013339
Strand -
CircType exon
Host Gene ENSG00000169604.18;
Algorism CIRI2;
Sequence GGAACTCCTTCCATTGCAAAAGCTCGGCGCGGCCTCGGGAGCTGCCCGGCGGCCCCGGACCGAGGCAGCCCTCCCCTTTAAAAGAAGCGGAGGACAGGATTGGGATCCTTGAAACCCGAAACCCAGAAACAGCATCGGAGCGGAAACCAGAGGGGAAAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr2:69013181|69013339 hsa-miR-498-5p 0 0 1
chr2:69013181|69013339 hsa-miR-498-3p 0 0 1
chr2:69013181|69013339 hsa-miR-507 0 0 1
chr2:69013181|69013339 hsa-miR-557 0 0 1
chr2:69013181|69013339 hsa-miR-572 0 0 1
chr2:69013181|69013339 hsa-miR-629-5p 0 0 1
chr2:69013181|69013339 hsa-miR-629-3p 0 0 1
chr2:69013181|69013339 hsa-miR-450b-5p 0 0 1
chr2:69013181|69013339 hsa-miR-612 0 1 0
chr2:69013181|69013339 hsa-miR-638 1 0 0
chr2:69013181|69013339 hsa-miR-762 1 0 0
chr2:69013181|69013339 hsa-miR-544b 1 0 0
chr2:69013181|69013339 hsa-miR-3183 1 0 0
chr2:69013181|69013339 hsa-miR-4292 1 0 0
chr2:69013181|69013339 hsa-miR-4449 1 0 0
chr2:69013181|69013339 hsa-miR-4469 1 0 0
chr2:69013181|69013339 hsa-miR-4660 0 1 0
chr2:69013181|69013339 hsa-miR-4741 1 1 0
chr2:69013181|69013339 hsa-miR-5705 1 1 0
chr2:69013181|69013339 hsa-miR-29b-1-5p 0 1 0
chr2:69013181|69013339 hsa-miR-103a-2-5p 0 1 0
chr2:69013181|69013339 hsa-miR-128-1-5p 0 1 0
chr2:69013181|69013339 hsa-miR-6765-5p 1 0 0
chr2:69013181|69013339 hsa-miR-6089 1 1 0
chr2:69013181|69013339 hsa-miR-4728-3p 1 0 0
chr2:69013181|69013339 hsa-miR-423-3p 0 1 0
chr2:69013181|69013339 hsa-miR-4733-5p 0 1 0
chr2:69013181|69013339 hsa-miR-6882-3p 0 1 0
chr2:69013181|69013339 hsa-miR-6784-5p 0 1 0
chr2:69013181|69013339 hsa-miR-5001-3p 0 1 0
chr2:69013181|69013339 hsa-miR-6780a-3p 0 1 0
chr2:69013181|69013339 hsa-miR-146b-3p 1 0 0
chr2:69013181|69013339 hsa-miR-4661-3p 0 1 0
chr2:69013181|69013339 hsa-miR-1910-5p 0 1 0
chr2:69013181|69013339 hsa-miR-6826-3p 1 1 0
chr2:69013181|69013339 hsa-miR-6748-3p 0 1 0
chr2:69013181|69013339 hsa-miR-1915-3p 1 0 0
chr2:69013181|69013339 hsa-miR-10394-3p 1 0 0
chr2:69013181|69013339 hsa-miR-1199-5p 1 0 0
chr2:69013181|69013339 hsa-miR-4723-3p 1 0 0
chr2:69013181|69013339 hsa-miR-103a-1-5p 0 1 0
chr2:69013181|69013339 hsa-miR-6824-3p 0 1 0
chr2:69013181|69013339 hsa-miR-6764-3p 0 1 0
chr2:69013181|69013339 hsa-miR-561-5p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr2:69013181|69013339
ORF Type ORF1
Protein Length 32
Nucleotide Length 99
Protein Sequence MQKLGAASGAARRPRTEAALPFKRSGGQDWDP
Nucleotide Sequence TTGCAAAAGCTCGGCGCGGCCTCGGGAGCTGCCCGGCGGCCCCGGACCGAGGCAGCCCTCCCCTTTAAAAGAAGCGGAGGACAGGATTGGGATCCTTGA

CircID chr2:69013181|69013339
ORF Type ORF2
Protein Length 39
Nucleotide Length 117
Protein Sequence MPGGPGPRQPSPLKEAEDRIGILETRNPETASERKPEGK
Nucleotide Sequence CTGCCCGGCGGCCCCGGACCGAGGCAGCCCTCCCCTTTAAAAGAAGCGGAGGACAGGATTGGGATCCTTGAAACCCGAAACCCAGAAACAGCATCGGAGCGGAAACCAGAGGGGAAA

CircID chr2:69013181|69013339
ORF Type ORF3
Protein Length 50
Nucleotide Length 150
Protein Sequence MVSAPMLFLGFGFQGSQSCPPLLLKGRAASVRGRRAAPEAAPSFCNGRSS
Nucleotide Sequence CTGGTTTCCGCTCCGATGCTGTTTCTGGGTTTCGGGTTTCAAGGATCCCAATCCTGTCCTCCGCTTCTTTTAAAGGGGAGGGCTGCCTCGGTCCGGGGCCGCCGGGCAGCTCCCGAGGCCGCGCCGAGCTTTTGCAATGGAAGGAGTTCC

CircID chr2:69013181|69013339
ORF Type ORF4
Protein Length 32
Nucleotide Length 96
Protein Sequence MSSASFKGEGCLGPGPPGSSRGRAELLQWKEF
Nucleotide Sequence CTGTCCTCCGCTTCTTTTAAAGGGGAGGGCTGCCTCGGTCCGGGGCCGCCGGGCAGCTCCCGAGGCCGCGCCGAGCTTTTGCAATGGAAGGAGTTC

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites