CircRNA Information

General Information
circRNA Basic Information
CircID chr2:70087820|70088095
Strand +
CircType exon
Host Gene ENSG00000179818.12;
Algorism CIRI2;
Sequence ACCCGCCTTTCCCAATCAGGGAGCCGCACTGGGTGGCCGGCACCACCAGCCTCAGGGTGACCGGGGGCCTGCTGGCCGCGGTACTGTTGGTCATGGAGCTGTTGATATCTTCCTCCAGCTTGTCGATGATCATAGCGAAAGCCTTAAAGATGGCATTGGTGGGGCCGGTCAGAGTGATGATTCTCTCCGGACAATTCCCCTCCGAGATGTTGATCCGCGCGCCACTCTCCTCGCGGATCCTCTTAACCGACTCCCCTTTCTTCCCAATGATGCTTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr2:70087820|70088095 hsa-miR-214-5p 0 0 1
chr2:70087820|70088095 hsa-miR-214-3p 0 0 1
chr2:70087820|70088095 hsa-miR-185-5p 0 0 1
chr2:70087820|70088095 hsa-miR-185-3p 0 0 1
chr2:70087820|70088095 hsa-miR-421 0 0 1
chr2:70087820|70088095 hsa-miR-765 0 0 1
chr2:70087820|70088095 hsa-miR-1203 0 0 1
chr2:70087820|70088095 hsa-miR-1825 0 0 1
chr2:70087820|70088095 hsa-miR-485-5p 0 1 1
chr2:70087820|70088095 hsa-miR-509-3p 0 0 1
chr2:70087820|70088095 hsa-miR-876-3p 0 0 1
chr2:70087820|70088095 hsa-miR-125a-5p 0 0 1
chr2:70087820|70088095 hsa-miR-151-5p 0 0 1
chr2:70087820|70088095 hsa-miR-323-5p 0 0 1
chr2:70087820|70088095 hsa-miR-125b 0 0 1
chr2:70087820|70088095 hsa-miR-138 0 0 1
chr2:70087820|70088095 hsa-miR-219-2-3p 0 0 1
chr2:70087820|70088095 hsa-miR-101 0 0 1
chr2:70087820|70088095 hsa-miR-762 1 0 0
chr2:70087820|70088095 hsa-miR-2110 1 0 0
chr2:70087820|70088095 hsa-miR-3122 1 0 0
chr2:70087820|70088095 hsa-miR-544b 0 1 0
chr2:70087820|70088095 hsa-miR-3147 1 0 0
chr2:70087820|70088095 hsa-miR-3154 1 0 0
chr2:70087820|70088095 hsa-miR-1260b 0 1 0
chr2:70087820|70088095 hsa-miR-3175 1 0 0
chr2:70087820|70088095 hsa-miR-3185 1 0 0
chr2:70087820|70088095 hsa-miR-4271 1 0 0
chr2:70087820|70088095 hsa-miR-3911 1 0 0
chr2:70087820|70088095 hsa-miR-3916 0 1 0
chr2:70087820|70088095 hsa-miR-3135b 0 1 0
chr2:70087820|70088095 hsa-miR-4466 1 0 0
chr2:70087820|70088095 hsa-miR-3689c 1 0 0
chr2:70087820|70088095 hsa-miR-4484 0 1 0
chr2:70087820|70088095 hsa-miR-4706 1 1 0
chr2:70087820|70088095 hsa-miR-4739 1 0 0
chr2:70087820|70088095 hsa-miR-5192 0 1 0
chr2:70087820|70088095 hsa-miR-5572 1 0 0
chr2:70087820|70088095 hsa-miR-138-5p 0 1 0
chr2:70087820|70088095 hsa-miR-92a-1-5p 1 0 0
chr2:70087820|70088095 hsa-miR-668-3p 0 1 0
chr2:70087820|70088095 hsa-miR-6809-5p 1 0 0
chr2:70087820|70088095 hsa-miR-3150a-3p 1 0 0
chr2:70087820|70088095 hsa-miR-7106-5p 1 0 0
chr2:70087820|70088095 hsa-miR-6894-5p 1 0 0
chr2:70087820|70088095 hsa-miR-15b-3p 0 1 0
chr2:70087820|70088095 hsa-miR-6089 1 0 0
chr2:70087820|70088095 hsa-miR-6880-5p 1 0 0
chr2:70087820|70088095 hsa-miR-6746-5p 1 0 0
chr2:70087820|70088095 hsa-miR-3189-5p 0 1 0
chr2:70087820|70088095 hsa-miR-6783-5p 0 1 0
chr2:70087820|70088095 hsa-miR-6760-5p 1 0 0
chr2:70087820|70088095 hsa-miR-6810-5p 1 0 0
chr2:70087820|70088095 hsa-miR-6786-5p 1 0 0
chr2:70087820|70088095 hsa-miR-204-3p 1 0 0
chr2:70087820|70088095 hsa-miR-6771-5p 1 0 0
chr2:70087820|70088095 hsa-miR-6824-5p 1 0 0
chr2:70087820|70088095 hsa-miR-490-3p 1 0 0
chr2:70087820|70088095 hsa-miR-4707-5p 1 0 0
chr2:70087820|70088095 hsa-miR-7106-3p 0 1 0
chr2:70087820|70088095 hsa-miR-584-3p 1 1 0
chr2:70087820|70088095 hsa-miR-4661-3p 0 1 0
chr2:70087820|70088095 hsa-miR-4758-3p 0 1 0
chr2:70087820|70088095 hsa-miR-6794-3p 0 1 0
chr2:70087820|70088095 hsa-miR-4714-5p 0 1 0
chr2:70087820|70088095 hsa-miR-1233-5p 1 0 0
chr2:70087820|70088095 hsa-miR-1273h-5p 1 0 0
chr2:70087820|70088095 hsa-miR-3689b-3p 1 0 0
chr2:70087820|70088095 hsa-miR-6778-5p 1 0 0
chr2:70087820|70088095 hsa-miR-6812-5p 1 0 0
chr2:70087820|70088095 hsa-miR-6870-5p 1 0 0
chr2:70087820|70088095 hsa-miR-6763-5p 1 0 0
chr2:70087820|70088095 hsa-miR-6779-5p 1 0 0
chr2:70087820|70088095 hsa-miR-6780a-5p 1 0 0
chr2:70087820|70088095 hsa-miR-6788-5p 1 0 0
chr2:70087820|70088095 hsa-miR-5196-5p 1 0 0
chr2:70087820|70088095 hsa-miR-3689a-3p 1 0 0
chr2:70087820|70088095 hsa-miR-6777-5p 1 0 0
chr2:70087820|70088095 hsa-miR-6795-5p 1 0 0
chr2:70087820|70088095 hsa-miR-6887-5p 1 0 0
chr2:70087820|70088095 hsa-miR-6889-5p 1 1 0
chr2:70087820|70088095 hsa-miR-939-5p 1 0 0
chr2:70087820|70088095 hsa-miR-6758-5p 1 0 0
chr2:70087820|70088095 hsa-miR-6856-5p 1 0 0
chr2:70087820|70088095 hsa-miR-4646-5p 1 0 0
chr2:70087820|70088095 hsa-miR-4747-5p 1 0 0
chr2:70087820|70088095 hsa-miR-4667-5p 1 0 0
chr2:70087820|70088095 hsa-miR-6791-5p 1 1 0
chr2:70087820|70088095 hsa-miR-10392-3p 1 1 0
chr2:70087820|70088095 hsa-miR-11181-5p 0 1 0
chr2:70087820|70088095 hsa-miR-3619-5p 0 1 0
chr2:70087820|70088095 hsa-miR-4482-5p 0 1 0
chr2:70087820|70088095 hsa-miR-301b-5p 0 1 0
chr2:70087820|70088095 hsa-miR-101-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr2:70087820|70088095
ORF Type ORF1
Protein Length 82
Nucleotide Length 246
Protein Sequence MGGRHHQPQGDRGPAGRGTVGHGAVDIFLQLVDDHSESLKDGIGGAGQSDDSLRTIPLRDVDPRATLLADPLNRLPFLPNDA
Nucleotide Sequence CTGGGTGGCCGGCACCACCAGCCTCAGGGTGACCGGGGGCCTGCTGGCCGCGGTACTGTTGGTCATGGAGCTGTTGATATCTTCCTCCAGCTTGTCGATGATCATAGCGAAAGCCTTAAAGATGGCATTGGTGGGGCCGGTCAGAGTGATGATTCTCTCCGGACAATTCCCCTCCGAGATGTTGATCCGCGCGCCACTCTCCTCGCGGATCCTCTTAACCGACTCCCCTTTCTTCCCAATGATGCT

CircID chr2:70087820|70088095
ORF Type ORF2
Protein Length 69
Nucleotide Length 207
Protein Sequence MLAAVLLVMELLISSSSLSMIIAKALKMALVGPVRVMILSGQFPSEMLIRAPLSSRILLTDSPFFPMML
Nucleotide Sequence CTGCTGGCCGCGGTACTGTTGGTCATGGAGCTGTTGATATCTTCCTCCAGCTTGTCGATGATCATAGCGAAAGCCTTAAAGATGGCATTGGTGGGGCCGGTCAGAGTGATGATTCTCTCCGGACAATTCCCCTCCGAGATGTTGATCCGCGCGCCACTCTCCTCGCGGATCCTCTTAACCGACTCCCCTTTCTTCCCAATGATGCTT

CircID chr2:70087820|70088095
ORF Type ORF3
Protein Length 32
Nucleotide Length 99
Protein Sequence MGRKGSRLRGSARRVARGSTSRRGIVRRESSL
Nucleotide Sequence TTGGGAAGAAAGGGGAGTCGGTTAAGAGGATCCGCGAGGAGAGTGGCGCGCGGATCAACATCTCGGAGGGGAATTGTCCGGAGAGAATCATCACTCTGA

CircID chr2:70087820|70088095
ORF Type ORF4
Protein Length 57
Nucleotide Length 171
Protein Sequence MTGPTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGG
Nucleotide Sequence CTGACCGGCCCCACCAATGCCATCTTTAAGGCTTTCGCTATGATCATCGACAAGCTGGAGGAAGATATCAACAGCTCCATGACCAACAGTACCGCGGCCAGCAGGCCCCCGGTCACCCTGAGGCTGGTGGTGCCGGCCACCCAGTGCGGCTCCCTGATTGGGAAAGGCGGG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites