CircRNA Information

General Information
circRNA Basic Information
CircID chr2:73226136|73226264
Strand -
CircType exon
Host Gene ENSG00000135632.10;
Algorism CIRI2;
Sequence ACTGCTGCTGAGTTGGCTCAGACTCTGCACTGGCACTGAGCCTTTCACAACTGGCCTCCCCTTGAGGTTCCTCCACTCTAGGGTTTGAGGGGCTGGAATCAGGGCCAGGGCCTAACAGTGTTTCTTCCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr2:73226136|73226264 hsa-miR-15a-5p 0 0 1
chr2:73226136|73226264 hsa-miR-15a-3p 0 0 1
chr2:73226136|73226264 hsa-miR-148a-5p 0 0 1
chr2:73226136|73226264 hsa-miR-148a-3p 0 0 1
chr2:73226136|73226264 hsa-miR-214-5p 0 0 1
chr2:73226136|73226264 hsa-miR-214-3p 0 0 1
chr2:73226136|73226264 hsa-miR-15b-5p 0 0 1
chr2:73226136|73226264 hsa-miR-15b-3p 0 0 1
chr2:73226136|73226264 hsa-miR-141-5p 0 0 1
chr2:73226136|73226264 hsa-miR-141-3p 0 0 1
chr2:73226136|73226264 hsa-miR-152-5p 0 0 1
chr2:73226136|73226264 hsa-miR-152-3p 0 0 1
chr2:73226136|73226264 hsa-miR-195-5p 0 0 1
chr2:73226136|73226264 hsa-miR-195-3p 0 0 1
chr2:73226136|73226264 hsa-miR-200a-5p 0 0 1
chr2:73226136|73226264 hsa-miR-200a-3p 0 0 1
chr2:73226136|73226264 hsa-miR-328-5p 0 0 1
chr2:73226136|73226264 hsa-miR-328-3p 0 0 1
chr2:73226136|73226264 hsa-miR-148b-5p 0 0 1
chr2:73226136|73226264 hsa-miR-148b-3p 0 0 1
chr2:73226136|73226264 hsa-miR-424-5p 0 0 1
chr2:73226136|73226264 hsa-miR-424-3p 0 0 1
chr2:73226136|73226264 hsa-miR-488-5p 0 0 1
chr2:73226136|73226264 hsa-miR-488-3p 0 0 1
chr2:73226136|73226264 hsa-miR-497-5p 0 0 1
chr2:73226136|73226264 hsa-miR-497-3p 0 0 1
chr2:73226136|73226264 hsa-miR-765 0 0 1
chr2:73226136|73226264 hsa-miR-922 0 0 1
chr2:73226136|73226264 hsa-miR-1208 0 0 1
chr2:73226136|73226264 hsa-miR-1291 0 1 1
chr2:73226136|73226264 hsa-miR-1258 0 0 1
chr2:73226136|73226264 hsa-miR-1825 0 0 1
chr2:73226136|73226264 hsa-miR-512-5p 0 0 1
chr2:73226136|73226264 hsa-miR-371-5p 0 0 1
chr2:73226136|73226264 hsa-miR-16 0 0 1
chr2:73226136|73226264 hsa-miR-24 0 0 1
chr2:73226136|73226264 hsa-miR-1295 0 0 1
chr2:73226136|73226264 hsa-miR-4280 0 1 0
chr2:73226136|73226264 hsa-miR-4706 1 0 0
chr2:73226136|73226264 hsa-miR-4739 1 0 0
chr2:73226136|73226264 hsa-miR-12115 1 0 0
chr2:73226136|73226264 hsa-miR-12120 1 1 0
chr2:73226136|73226264 hsa-miR-766-3p 0 1 0
chr2:73226136|73226264 hsa-miR-766-5p 1 0 0
chr2:73226136|73226264 hsa-miR-7847-3p 1 1 0
chr2:73226136|73226264 hsa-miR-24-3p 0 1 0
chr2:73226136|73226264 hsa-miR-3928-3p 0 1 0
chr2:73226136|73226264 hsa-miR-874-3p 1 0 0
chr2:73226136|73226264 hsa-miR-652-5p 0 1 0
chr2:73226136|73226264 hsa-miR-6824-5p 1 0 0
chr2:73226136|73226264 hsa-miR-3678-3p 0 1 0
chr2:73226136|73226264 hsa-miR-1296-5p 1 0 0
chr2:73226136|73226264 hsa-miR-4749-3p 0 1 0
chr2:73226136|73226264 hsa-miR-5007-5p 0 1 0
chr2:73226136|73226264 hsa-miR-1233-5p 1 0 0
chr2:73226136|73226264 hsa-miR-7111-5p 1 0 0
chr2:73226136|73226264 hsa-miR-4725-3p 1 0 0
chr2:73226136|73226264 hsa-miR-6795-5p 1 0 0
chr2:73226136|73226264 hsa-miR-6775-3p 0 1 0
chr2:73226136|73226264 hsa-miR-6512-3p 0 1 0
chr2:73226136|73226264 hsa-miR-371a-5p 0 1 0
chr2:73226136|73226264 hsa-miR-514b-5p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr2:73226136|73226264
ORF Type ORF1
Protein Length 28
Nucleotide Length 87
Protein Sequence LLLSWLRLCTGTEPFTTGLPLRFLHSRV
Nucleotide Sequence CTGCTGCTGAGTTGGCTCAGACTCTGCACTGGCACTGAGCCTTTCACAACTGGCCTCCCCTTGAGGTTCCTCCACTCTAGGGTTTGA
CircID chr2:73226136|73226264
ORF Type ORF2
Protein Length 36
Nucleotide Length 108
Protein Sequence MALIPAPQTLEWRNLKGRPVVKGSVPVQSLSQLSSS
Nucleotide Sequence CTGGCCCTGATTCCAGCCCCTCAAACCCTAGAGTGGAGGAACCTCAAGGGGAGGCCAGTTGTGAAAGGCTCAGTGCCAGTGCAGAGTCTGAGCCAACTCAGCAGCAGT
CircID chr2:73226136|73226264
ORF Type ORF3
Protein Length 39
Nucleotide Length 117
Protein Sequence MLGPGPDSSPSNPRVEEPQGEASCERLSASAESEPTQQQ
Nucleotide Sequence CTGTTAGGCCCTGGCCCTGATTCCAGCCCCTCAAACCCTAGAGTGGAGGAACCTCAAGGGGAGGCCAGTTGTGAAAGGCTCAGTGCCAGTGCAGAGTCTGAGCCAACTCAGCAGCAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab