CircRNA Information

General Information
circRNA Basic Information
CircID chr2:73228264|73228395
Strand -
CircType exon
Host Gene ENSG00000135617.3;
Algorism CIRI2;
Sequence CCTTGGGGGCCCTGGGGAAGGGAAGGCCAGTGGTGTGGCTTCCCTTTCAGCCTAGCAACGCCCAAACCCTTTTCCTCTACCTGGCTCCACTTGTCCCCAGATGCTATCTCCAAATTCCAAGTAGCAAAATTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr2:73228264|73228395 hsa-miR-204-5p 0 0 1
chr2:73228264|73228395 hsa-miR-204-3p 0 0 1
chr2:73228264|73228395 hsa-miR-211-5p 0 0 1
chr2:73228264|73228395 hsa-miR-211-3p 0 0 1
chr2:73228264|73228395 hsa-miR-488-5p 0 0 1
chr2:73228264|73228395 hsa-miR-488-3p 0 0 1
chr2:73228264|73228395 hsa-miR-193b-5p 0 0 1
chr2:73228264|73228395 hsa-miR-193b-3p 0 0 1
chr2:73228264|73228395 hsa-miR-585-5p 0 0 1
chr2:73228264|73228395 hsa-miR-585-3p 0 0 1
chr2:73228264|73228395 hsa-miR-620 0 0 1
chr2:73228264|73228395 hsa-miR-623 0 0 1
chr2:73228264|73228395 hsa-miR-637 1 0 1
chr2:73228264|73228395 hsa-miR-645 0 0 1
chr2:73228264|73228395 hsa-miR-890 0 0 1
chr2:73228264|73228395 hsa-miR-877-5p 0 0 1
chr2:73228264|73228395 hsa-miR-877-3p 0 0 1
chr2:73228264|73228395 hsa-miR-1270 0 0 1
chr2:73228264|73228395 hsa-miR-671-5p 0 0 1
chr2:73228264|73228395 hsa-miR-296-5p 0 0 1
chr2:73228264|73228395 hsa-miR-193a-3p 0 1 1
chr2:73228264|73228395 hsa-miR-1268 0 0 1
chr2:73228264|73228395 hsa-miR-768-5p 0 0 1
chr2:73228264|73228395 hsa-miR-638 1 0 0
chr2:73228264|73228395 hsa-miR-650 1 0 0
chr2:73228264|73228395 hsa-miR-2861 1 0 0
chr2:73228264|73228395 hsa-miR-3125 1 0 0
chr2:73228264|73228395 hsa-miR-3132 1 0 0
chr2:73228264|73228395 hsa-miR-3916 1 0 0
chr2:73228264|73228395 hsa-miR-3929 0 1 0
chr2:73228264|73228395 hsa-miR-4450 1 0 0
chr2:73228264|73228395 hsa-miR-4451 1 0 0
chr2:73228264|73228395 hsa-miR-4496 1 0 0
chr2:73228264|73228395 hsa-miR-4516 1 0 0
chr2:73228264|73228395 hsa-miR-4534 1 0 0
chr2:73228264|73228395 hsa-miR-4656 1 0 0
chr2:73228264|73228395 hsa-miR-4689 1 0 0
chr2:73228264|73228395 hsa-miR-4734 1 0 0
chr2:73228264|73228395 hsa-miR-4784 1 0 0
chr2:73228264|73228395 hsa-miR-5681a 0 1 0
chr2:73228264|73228395 hsa-miR-6124 1 1 0
chr2:73228264|73228395 hsa-miR-8089 1 1 0
chr2:73228264|73228395 hsa-miR-12114 1 0 0
chr2:73228264|73228395 hsa-miR-12115 1 1 0
chr2:73228264|73228395 hsa-miR-7155-5p 1 0 0
chr2:73228264|73228395 hsa-miR-6857-5p 1 1 0
chr2:73228264|73228395 hsa-miR-766-5p 1 0 0
chr2:73228264|73228395 hsa-miR-1227-5p 1 0 0
chr2:73228264|73228395 hsa-miR-6807-5p 1 0 0
chr2:73228264|73228395 hsa-miR-6873-5p 1 0 0
chr2:73228264|73228395 hsa-miR-6880-5p 1 1 0
chr2:73228264|73228395 hsa-miR-7847-3p 1 0 0
chr2:73228264|73228395 hsa-miR-7154-3p 1 0 0
chr2:73228264|73228395 hsa-miR-505-5p 1 1 0
chr2:73228264|73228395 hsa-miR-4755-3p 1 0 0
chr2:73228264|73228395 hsa-miR-6727-5p 1 0 0
chr2:73228264|73228395 hsa-miR-197-5p 1 0 0
chr2:73228264|73228395 hsa-miR-6776-5p 1 0 0
chr2:73228264|73228395 hsa-miR-7845-5p 1 0 0
chr2:73228264|73228395 hsa-miR-6716-5p 1 0 0
chr2:73228264|73228395 hsa-miR-1292-5p 1 0 0
chr2:73228264|73228395 hsa-miR-6827-5p 1 0 0
chr2:73228264|73228395 hsa-miR-6798-5p 1 0 0
chr2:73228264|73228395 hsa-miR-3150b-3p 1 0 0
chr2:73228264|73228395 hsa-miR-6810-5p 1 1 0
chr2:73228264|73228395 hsa-miR-1226-5p 1 0 0
chr2:73228264|73228395 hsa-miR-4786-3p 0 1 0
chr2:73228264|73228395 hsa-miR-4640-5p 1 0 0
chr2:73228264|73228395 hsa-miR-6757-3p 0 1 0
chr2:73228264|73228395 hsa-miR-4732-5p 1 0 0
chr2:73228264|73228395 hsa-miR-937-5p 1 0 0
chr2:73228264|73228395 hsa-miR-6824-5p 1 0 0
chr2:73228264|73228395 hsa-miR-3191-3p 1 0 0
chr2:73228264|73228395 hsa-miR-7846-3p 1 0 0
chr2:73228264|73228395 hsa-miR-6832-5p 1 0 0
chr2:73228264|73228395 hsa-miR-5088-3p 0 1 0
chr2:73228264|73228395 hsa-miR-449b-3p 0 1 0
chr2:73228264|73228395 hsa-miR-6734-3p 0 1 0
chr2:73228264|73228395 hsa-miR-4763-3p 1 0 0
chr2:73228264|73228395 hsa-miR-11181-3p 1 0 0
chr2:73228264|73228395 hsa-miR-1249-5p 1 0 0
chr2:73228264|73228395 hsa-miR-6763-5p 1 0 0
chr2:73228264|73228395 hsa-miR-7111-5p 1 0 0
chr2:73228264|73228395 hsa-miR-320a-5p 0 1 0
chr2:73228264|73228395 hsa-miR-4755-5p 0 1 0
chr2:73228264|73228395 hsa-miR-3620-5p 1 0 0
chr2:73228264|73228395 hsa-miR-4728-5p 1 0 0
chr2:73228264|73228395 hsa-miR-5189-5p 1 0 0
chr2:73228264|73228395 hsa-miR-10526-3p 1 0 0
chr2:73228264|73228395 hsa-miR-328-5p 1 0 0
chr2:73228264|73228395 hsa-miR-4726-5p 1 0 0
chr2:73228264|73228395 hsa-miR-6729-5p 1 0 0
chr2:73228264|73228395 hsa-miR-6831-5p 1 1 0
chr2:73228264|73228395 hsa-miR-6845-5p 1 0 0
chr2:73228264|73228395 hsa-miR-4665-5p 1 0 0
chr2:73228264|73228395 hsa-miR-6855-5p 1 0 0
chr2:73228264|73228395 hsa-miR-4700-5p 1 1 0
chr2:73228264|73228395 hsa-miR-4667-5p 1 1 0
chr2:73228264|73228395 hsa-miR-3529-5p 1 0 0
chr2:73228264|73228395 hsa-miR-6837-5p 0 1 0
chr2:73228264|73228395 hsa-miR-6859-5p 1 1 0
chr2:73228264|73228395 hsa-miR-5006-3p 0 1 0
chr2:73228264|73228395 hsa-miR-3922-3p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr2:73228264|73228395
ORF Type ORF1
Protein Length 43
Nucleotide Length 129
Protein Sequence LGALGKGRPVVWLPFQPSNAQTLFLYLAPLVPRCYLQIPSSKI
Nucleotide Sequence TTGGGGGCCCTGGGGAAGGGAAGGCCAGTGGTGTGGCTTCCCTTTCAGCCTAGCAACGCCCAAACCCTTTTCCTCTACCTGGCTCCACTTGTCCCCAGATGCTATCTCCAAATTCCAAGTAGCAAAATT
CircID chr2:73228264|73228395
ORF Type ORF2
Protein Length 37
Nucleotide Length 111
Protein Sequence MEIASGDKWSQVEEKGLGVARLKGKPHHWPSLPQGPQ
Nucleotide Sequence TTGGAGATAGCATCTGGGGACAAGTGGAGCCAGGTAGAGGAAAAGGGTTTGGGCGTTGCTAGGCTGAAAGGGAAGCCACACCACTGGCCTTCCCTTCCCCAGGGCCCCCAA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab