CircRNA Information

General Information
circRNA Basic Information
CircID chr2:73244553|73244715
Strand +
CircType exon
Host Gene ENSG00000135624.14;
Algorism CIRI2;
Sequence CTCGAGGGCTCCACCCTGTACCTTCTTGATTCCAATCATTTTAAGCTGCAGCAAATCATCGAGCATCATCACTGCATCCACCACCATCTTAGCAAAGAAAGCTTTCTGCTGGGAGATCAGCTTGGAGCTCAGAGCGGTCATGGCACACTTTTCCAGCAGCTTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr2:73244553|73244715 hsa-miR-150-5p 0 0 1
chr2:73244553|73244715 hsa-miR-150-3p 0 0 1
chr2:73244553|73244715 hsa-miR-595 0 1 1
chr2:73244553|73244715 hsa-miR-648 0 0 1
chr2:73244553|73244715 hsa-miR-1301-5p 0 0 1
chr2:73244553|73244715 hsa-miR-1301-3p 0 0 1
chr2:73244553|73244715 hsa-miR-922 0 0 1
chr2:73244553|73244715 hsa-miR-1227-5p 0 0 1
chr2:73244553|73244715 hsa-miR-1227-3p 0 0 1
chr2:73244553|73244715 hsa-miR-1287-5p 0 0 1
chr2:73244553|73244715 hsa-miR-1287-3p 0 0 1
chr2:73244553|73244715 hsa-miR-1322 0 1 1
chr2:73244553|73244715 hsa-miR-532-3p 0 0 1
chr2:73244553|73244715 hsa-miR-1184 0 0 1
chr2:73244553|73244715 hsa-miR-509-3p 0 0 1
chr2:73244553|73244715 hsa-miR-876-3p 0 0 1
chr2:73244553|73244715 hsa-miR-875-3p 0 0 1
chr2:73244553|73244715 hsa-miR-1233 0 0 1
chr2:73244553|73244715 hsa-miR-323-5p 0 0 1
chr2:73244553|73244715 hsa-miR-3132 1 0 0
chr2:73244553|73244715 hsa-miR-3165 1 1 0
chr2:73244553|73244715 hsa-miR-3921 0 1 0
chr2:73244553|73244715 hsa-miR-3135b 1 0 0
chr2:73244553|73244715 hsa-miR-3960 1 0 0
chr2:73244553|73244715 hsa-miR-4647 0 1 0
chr2:73244553|73244715 hsa-miR-5691 1 1 0
chr2:73244553|73244715 hsa-miR-5695 0 1 0
chr2:73244553|73244715 hsa-miR-6081 1 0 0
chr2:73244553|73244715 hsa-miR-6134 1 0 0
chr2:73244553|73244715 hsa-miR-141-5p 0 1 0
chr2:73244553|73244715 hsa-miR-3692-5p 0 1 0
chr2:73244553|73244715 hsa-miR-8071 1 0 0
chr2:73244553|73244715 hsa-miR-6880-5p 1 0 0
chr2:73244553|73244715 hsa-miR-6741-5p 1 0 0
chr2:73244553|73244715 hsa-miR-8069 1 0 0
chr2:73244553|73244715 hsa-miR-6776-5p 1 0 0
chr2:73244553|73244715 hsa-miR-432-5p 1 0 0
chr2:73244553|73244715 hsa-miR-6871-5p 1 0 0
chr2:73244553|73244715 hsa-miR-4713-5p 0 1 0
chr2:73244553|73244715 hsa-miR-3691-5p 1 1 0
chr2:73244553|73244715 hsa-miR-296-3p 1 0 0
chr2:73244553|73244715 hsa-miR-6769b-5p 1 0 0
chr2:73244553|73244715 hsa-miR-6893-5p 1 0 0
chr2:73244553|73244715 hsa-miR-6743-5p 1 0 0
chr2:73244553|73244715 hsa-miR-449c-5p 1 0 0
chr2:73244553|73244715 hsa-miR-3085-5p 1 0 0
chr2:73244553|73244715 hsa-miR-4653-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr2:73244553|73244715
ORF Type ORF1
Protein Length 49
Nucleotide Length 147
Protein Sequence MYLLDSNHFKLQQIIEHHHCIHHHLSKESFLLGDQLGAQSGHGTLFQQL
Nucleotide Sequence CTGTACCTTCTTGATTCCAATCATTTTAAGCTGCAGCAAATCATCGAGCATCATCACTGCATCCACCACCATCTTAGCAAAGAAAGCTTTCTGCTGGGAGATCAGCTTGGAGCTCAGAGCGGTCATGGCACACTTTTCCAGCAGCTT

CircID chr2:73244553|73244715
ORF Type ORF2
Protein Length 46
Nucleotide Length 138
Protein Sequence MIPIILSCSKSSSIITASTTILAKKAFCWEISLELRAVMAHFSSSF
Nucleotide Sequence TTGATTCCAATCATTTTAAGCTGCAGCAAATCATCGAGCATCATCACTGCATCCACCACCATCTTAGCAAAGAAAGCTTTCTGCTGGGAGATCAGCTTGGAGCTCAGAGCGGTCATGGCACACTTTTCCAGCAGCTTC

CircID chr2:73244553|73244715
ORF Type ORF3
Protein Length 53
Nucleotide Length 159
Protein Sequence MLEKCAMTALSSKLISQQKAFFAKMVVDAVMMLDDLLQLKMIGIKKVQGGALE
Nucleotide Sequence CTGCTGGAAAAGTGTGCCATGACCGCTCTGAGCTCCAAGCTGATCTCCCAGCAGAAAGCTTTCTTTGCTAAGATGGTGGTGGATGCAGTGATGATGCTCGATGATTTGCTGCAGCTTAAAATGATTGGAATCAAGAAGGTACAGGGTGGAGCCCTCGAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites