CircRNA Information

General Information
circRNA Basic Information
CircID chr2:74048230|74048397
Strand -
CircType exon
Host Gene ENSG00000187605.14;
Algorism CIRI2;
Sequence CTGCTTCCATTCAGAGGAGGGAGGACAGGAGGCCACACCCACCAAGGCTGAGAACCCACTCACACCCACCCTCAGTGGCTTCTTGGAGTCACCTCTTAAGTACCTGGACACACCCACCAAGAGTCTGCTGGACACACCTGCCAAGAGAGCCCAGGCCGAGTTCCCCAC
circRNA Expression in different cancers

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circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr2:74048230|74048397 hsa-miR-198 0 0 1
chr2:74048230|74048397 hsa-miR-609 0 0 1
chr2:74048230|74048397 hsa-miR-661 1 1 1
chr2:74048230|74048397 hsa-miR-541-5p 0 0 1
chr2:74048230|74048397 hsa-miR-541-3p 0 0 1
chr2:74048230|74048397 hsa-miR-922 0 0 1
chr2:74048230|74048397 hsa-miR-1234-3p 0 0 1
chr2:74048230|74048397 hsa-miR-663b 0 0 1
chr2:74048230|74048397 hsa-miR-1234 0 0 1
chr2:74048230|74048397 hsa-miR-671-5p 0 0 1
chr2:74048230|74048397 hsa-miR-491-5p 0 1 1
chr2:74048230|74048397 hsa-miR-654-5p 0 0 1
chr2:74048230|74048397 hsa-miR-338-3p 0 0 1
chr2:74048230|74048397 hsa-miR-1207-5p 1 0 1
chr2:74048230|74048397 hsa-miR-644 0 0 1
chr2:74048230|74048397 hsa-miR-601 1 0 0
chr2:74048230|74048397 hsa-miR-608 1 0 0
chr2:74048230|74048397 hsa-miR-644a 0 1 0
chr2:74048230|74048397 hsa-miR-762 1 0 0
chr2:74048230|74048397 hsa-miR-1182 1 0 0
chr2:74048230|74048397 hsa-miR-1231 1 0 0
chr2:74048230|74048397 hsa-miR-1538 1 0 0
chr2:74048230|74048397 hsa-miR-2110 1 1 0
chr2:74048230|74048397 hsa-miR-2861 1 0 0
chr2:74048230|74048397 hsa-miR-3141 1 0 0
chr2:74048230|74048397 hsa-miR-3176 1 0 0
chr2:74048230|74048397 hsa-miR-4252 0 1 0
chr2:74048230|74048397 hsa-miR-3650 1 1 0
chr2:74048230|74048397 hsa-miR-3661 1 0 0
chr2:74048230|74048397 hsa-miR-3917 1 0 0
chr2:74048230|74048397 hsa-miR-1268b 1 0 0
chr2:74048230|74048397 hsa-miR-4455 0 1 0
chr2:74048230|74048397 hsa-miR-4471 1 1 0
chr2:74048230|74048397 hsa-miR-4479 1 0 0
chr2:74048230|74048397 hsa-miR-1587 1 0 0
chr2:74048230|74048397 hsa-miR-4651 1 0 0
chr2:74048230|74048397 hsa-miR-4669 1 0 0
chr2:74048230|74048397 hsa-miR-4736 0 1 0
chr2:74048230|74048397 hsa-miR-4741 1 0 0
chr2:74048230|74048397 hsa-miR-5695 0 1 0
chr2:74048230|74048397 hsa-miR-5787 1 0 0
chr2:74048230|74048397 hsa-miR-6133 1 0 0
chr2:74048230|74048397 hsa-miR-6860 1 0 0
chr2:74048230|74048397 hsa-miR-8078 1 0 0
chr2:74048230|74048397 hsa-miR-4665-3p 1 0 0
chr2:74048230|74048397 hsa-miR-6747-5p 1 0 0
chr2:74048230|74048397 hsa-miR-124-5p 1 0 0
chr2:74048230|74048397 hsa-miR-6861-5p 1 0 0
chr2:74048230|74048397 hsa-miR-6857-5p 1 0 0
chr2:74048230|74048397 hsa-miR-4687-3p 1 0 0
chr2:74048230|74048397 hsa-miR-8071 1 0 0
chr2:74048230|74048397 hsa-miR-6804-5p 1 0 0
chr2:74048230|74048397 hsa-miR-6741-5p 1 0 0
chr2:74048230|74048397 hsa-miR-3622b-5p 1 0 0
chr2:74048230|74048397 hsa-miR-6759-5p 1 0 0
chr2:74048230|74048397 hsa-miR-1292-5p 1 0 0
chr2:74048230|74048397 hsa-miR-6748-5p 1 1 0
chr2:74048230|74048397 hsa-miR-6772-5p 1 0 0
chr2:74048230|74048397 hsa-miR-6793-5p 1 1 0
chr2:74048230|74048397 hsa-miR-6732-5p 1 0 0
chr2:74048230|74048397 hsa-miR-6782-5p 1 0 0
chr2:74048230|74048397 hsa-miR-6810-5p 1 0 0
chr2:74048230|74048397 hsa-miR-6850-5p 1 0 0
chr2:74048230|74048397 hsa-miR-939-3p 1 1 0
chr2:74048230|74048397 hsa-miR-1226-5p 1 0 0
chr2:74048230|74048397 hsa-miR-3944-3p 1 0 0
chr2:74048230|74048397 hsa-miR-6784-5p 1 0 0
chr2:74048230|74048397 hsa-miR-7854-3p 0 1 0
chr2:74048230|74048397 hsa-miR-6878-3p 0 1 0
chr2:74048230|74048397 hsa-miR-7111-3p 0 1 0
chr2:74048230|74048397 hsa-miR-4787-5p 1 0 0
chr2:74048230|74048397 hsa-miR-6802-5p 1 0 0
chr2:74048230|74048397 hsa-miR-6811-3p 1 0 0
chr2:74048230|74048397 hsa-miR-1307-3p 1 0 0
chr2:74048230|74048397 hsa-miR-4638-5p 1 0 0
chr2:74048230|74048397 hsa-miR-597-3p 0 1 0
chr2:74048230|74048397 hsa-miR-518c-5p 0 1 0
chr2:74048230|74048397 hsa-miR-6748-3p 0 1 0
chr2:74048230|74048397 hsa-miR-7152-5p 0 1 0
chr2:74048230|74048397 hsa-miR-2116-5p 0 1 0
chr2:74048230|74048397 hsa-miR-4763-3p 1 0 0
chr2:74048230|74048397 hsa-miR-6769b-5p 1 1 0
chr2:74048230|74048397 hsa-miR-6893-5p 1 0 0
chr2:74048230|74048397 hsa-miR-1343-5p 1 0 0
chr2:74048230|74048397 hsa-miR-6726-5p 1 0 0
chr2:74048230|74048397 hsa-miR-6737-5p 1 0 0
chr2:74048230|74048397 hsa-miR-6752-5p 1 0 0
chr2:74048230|74048397 hsa-miR-6756-5p 1 1 0
chr2:74048230|74048397 hsa-miR-6769a-5p 1 1 0
chr2:74048230|74048397 hsa-miR-6803-5p 1 0 0
chr2:74048230|74048397 hsa-miR-6815-5p 0 1 0
chr2:74048230|74048397 hsa-miR-6842-5p 1 0 0
chr2:74048230|74048397 hsa-miR-6851-5p 0 1 0
chr2:74048230|74048397 hsa-miR-7107-5p 1 1 0
chr2:74048230|74048397 hsa-miR-6722-3p 1 0 0
chr2:74048230|74048397 hsa-miR-6751-5p 1 0 0
chr2:74048230|74048397 hsa-miR-6763-5p 1 0 0
chr2:74048230|74048397 hsa-miR-3620-5p 1 0 0
chr2:74048230|74048397 hsa-miR-5189-5p 1 0 0
chr2:74048230|74048397 hsa-miR-6780b-5p 1 0 0
chr2:74048230|74048397 hsa-miR-4685-5p 1 0 0
chr2:74048230|74048397 hsa-miR-4701-3p 1 0 0
chr2:74048230|74048397 hsa-miR-4725-3p 1 0 0
chr2:74048230|74048397 hsa-miR-4745-5p 1 0 0
chr2:74048230|74048397 hsa-miR-6794-5p 1 0 0
chr2:74048230|74048397 hsa-miR-6795-5p 1 0 0
chr2:74048230|74048397 hsa-miR-6883-5p 1 0 0
chr2:74048230|74048397 hsa-miR-939-5p 1 0 0
chr2:74048230|74048397 hsa-miR-1238-5p 1 1 0
chr2:74048230|74048397 hsa-miR-4758-5p 1 1 0
chr2:74048230|74048397 hsa-miR-4665-5p 1 0 0
chr2:74048230|74048397 hsa-miR-6791-3p 0 1 0
chr2:74048230|74048397 hsa-miR-5591-5p 1 0 0
chr2:74048230|74048397 hsa-miR-330-5p 1 0 0
chr2:74048230|74048397 hsa-miR-6783-3p 1 0 0
chr2:74048230|74048397 hsa-miR-6843-3p 0 1 0
chr2:74048230|74048397 hsa-miR-5699-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr2:74048230|74048397
ORF Type ORF1
Protein Length 28
Nucleotide Length 84
Protein Sequence MESPLKYLDTPTKSLLDTPAKRAQAEFP
Nucleotide Sequence TTGGAGTCACCTCTTAAGTACCTGGACACACCCACCAAGAGTCTGCTGGACACACCTGCCAAGAGAGCCCAGGCCGAGTTCCCC
CircID chr2:74048230|74048397
ORF Type ORF2
Protein Length 40
Nucleotide Length 120
Protein Sequence MRTHSHPPSVASWSHLLSTWTHPPRVCWTHLPREPRPSSP
Nucleotide Sequence CTGAGAACCCACTCACACCCACCCTCAGTGGCTTCTTGGAGTCACCTCTTAAGTACCTGGACACACCCACCAAGAGTCTGCTGGACACACCTGCCAAGAGAGCCCAGGCCGAGTTCCCCA
CircID chr2:74048230|74048397
ORF Type ORF3
Protein Length 48
Nucleotide Length 144
Protein Sequence MAGVSSRLLVGVSRYLRGDSKKPLRVGVSGFSALVGVASCPPSSEWKQ
Nucleotide Sequence TTGGCAGGTGTGTCCAGCAGACTCTTGGTGGGTGTGTCCAGGTACTTAAGAGGTGACTCCAAGAAGCCACTGAGGGTGGGTGTGAGTGGGTTCTCAGCCTTGGTGGGTGTGGCCTCCTGTCCTCCCTCCTCTGAATGGAAGCAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab