CircRNA Information

General Information
circRNA Basic Information
CircID chr2:74426089|74426316
Strand +
CircType exon
Host Gene ENSG00000114993.14;
Algorism CIRI2;
Sequence CTCAGCGATCCCCACGGACCAGAGGCCTCTGCAGCAAAGGCCAACCTCGCACTTGGCTCCAGTCACCAGTGTGAGAGAGAAAGGTGCTGGCATAGGATCTGCCCAGAAGAGAAAATGACCCATGCGCAGTTGGGCTCTGGATACGGCGCTGTCTATAGCAAGTTGGCCAGTCTGGCCTCCTGTTCCTCTGCTGGACCTGGGGTAGGCTGCAGGGGTGGGCAGAAGCCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr2:74426089|74426316 hsa-miR-134-5p 0 0 1
chr2:74426089|74426316 hsa-miR-134-3p 0 0 1
chr2:74426089|74426316 hsa-miR-193b-5p 0 0 1
chr2:74426089|74426316 hsa-miR-193b-3p 0 0 1
chr2:74426089|74426316 hsa-miR-612 1 1 1
chr2:74426089|74426316 hsa-miR-638 0 0 1
chr2:74426089|74426316 hsa-miR-922 0 1 1
chr2:74426089|74426316 hsa-miR-1236-5p 0 0 1
chr2:74426089|74426316 hsa-miR-1236-3p 0 0 1
chr2:74426089|74426316 hsa-miR-1202 0 0 1
chr2:74426089|74426316 hsa-miR-491-5p 0 0 1
chr2:74426089|74426316 hsa-miR-1184 0 0 1
chr2:74426089|74426316 hsa-miR-525-5p 0 0 1
chr2:74426089|74426316 hsa-miR-338-3p 0 0 1
chr2:74426089|74426316 hsa-miR-324-3p 0 0 1
chr2:74426089|74426316 hsa-miR-520a-5p 0 0 1
chr2:74426089|74426316 hsa-miR-342-3p 0 0 1
chr2:74426089|74426316 hsa-miR-193a-3p 0 0 1
chr2:74426089|74426316 hsa-miR-1308 0 0 1
chr2:74426089|74426316 hsa-miR-1285 0 0 1
chr2:74426089|74426316 hsa-miR-661 1 0 0
chr2:74426089|74426316 hsa-miR-658 0 1 0
chr2:74426089|74426316 hsa-miR-760 1 0 0
chr2:74426089|74426316 hsa-miR-1294 0 1 0
chr2:74426089|74426316 hsa-miR-4299 0 1 0
chr2:74426089|74426316 hsa-miR-4298 1 0 0
chr2:74426089|74426316 hsa-miR-3916 0 1 0
chr2:74426089|74426316 hsa-miR-4480 0 1 0
chr2:74426089|74426316 hsa-miR-4530 0 1 0
chr2:74426089|74426316 hsa-miR-3972 0 1 0
chr2:74426089|74426316 hsa-miR-6081 1 0 0
chr2:74426089|74426316 hsa-miR-6860 0 1 0
chr2:74426089|74426316 hsa-miR-12125 0 1 0
chr2:74426089|74426316 hsa-miR-4726-3p 1 0 0
chr2:74426089|74426316 hsa-miR-6510-5p 0 1 0
chr2:74426089|74426316 hsa-miR-6089 1 0 0
chr2:74426089|74426316 hsa-miR-4695-5p 0 1 0
chr2:74426089|74426316 hsa-miR-4722-5p 1 0 0
chr2:74426089|74426316 hsa-miR-7110-3p 0 1 0
chr2:74426089|74426316 hsa-miR-4725-5p 1 0 0
chr2:74426089|74426316 hsa-miR-3126-5p 0 1 0
chr2:74426089|74426316 hsa-miR-2467-3p 0 1 0
chr2:74426089|74426316 hsa-miR-6815-3p 0 1 0
chr2:74426089|74426316 hsa-miR-4707-3p 1 0 0
chr2:74426089|74426316 hsa-miR-2277-3p 1 1 0
chr2:74426089|74426316 hsa-miR-4717-3p 1 0 0
chr2:74426089|74426316 hsa-miR-6847-5p 0 1 0
chr2:74426089|74426316 hsa-miR-4733-3p 1 0 0
chr2:74426089|74426316 hsa-miR-7156-3p 0 1 0
chr2:74426089|74426316 hsa-miR-3190-5p 0 1 0
chr2:74426089|74426316 hsa-miR-381-5p 0 1 0
chr2:74426089|74426316 hsa-miR-6738-3p 0 1 0
chr2:74426089|74426316 hsa-miR-331-3p 1 0 0
chr2:74426089|74426316 hsa-miR-11181-3p 1 0 0
chr2:74426089|74426316 hsa-miR-6722-3p 1 0 0
chr2:74426089|74426316 hsa-miR-6836-5p 1 0 0
chr2:74426089|74426316 hsa-miR-4685-5p 1 1 0
chr2:74426089|74426316 hsa-miR-3187-5p 0 1 0
chr2:74426089|74426316 hsa-miR-7843-5p 1 0 0
chr2:74426089|74426316 hsa-miR-377-5p 0 1 0
chr2:74426089|74426316 hsa-miR-4757-5p 0 1 0
chr2:74426089|74426316 hsa-miR-6810-3p 1 1 0
chr2:74426089|74426316 hsa-miR-6837-5p 1 1 0
chr2:74426089|74426316 hsa-miR-6859-5p 0 1 0
chr2:74426089|74426316 hsa-miR-6833-3p 0 1 0
chr2:74426089|74426316 hsa-miR-202-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr2:74426089|74426316
ORF Type ORF1
Protein Length 38
Nucleotide Length 114
Protein Sequence MTHAQLGSGYGAVYSKLASLASCSSAGPGVGCRGGQKP
Nucleotide Sequence ATGACCCATGCGCAGTTGGGCTCTGGATACGGCGCTGTCTATAGCAAGTTGGCCAGTCTGGCCTCCTGTTCCTCTGCTGGACCTGGGGTAGGCTGCAGGGGTGGGCAGAAGCCC

CircID chr2:74426089|74426316
ORF Type ORF2
Protein Length 29
Nucleotide Length 90
Protein Sequence MQQRPTSHLAPVTSVREKGAGIGSAQKRK
Nucleotide Sequence CTGCAGCAAAGGCCAACCTCGCACTTGGCTCCAGTCACCAGTGTGAGAGAGAAAGGTGCTGGCATAGGATCTGCCCAGAAGAGAAAATGA

CircID chr2:74426089|74426316
ORF Type ORF3
Protein Length 27
Nucleotide Length 84
Protein Sequence MRSWALDTALSIASWPVWPPVPLLDLG
Nucleotide Sequence ATGCGCAGTTGGGCTCTGGATACGGCGCTGTCTATAGCAAGTTGGCCAGTCTGGCCTCCTGTTCCTCTGCTGGACCTGGGGTAG

CircID chr2:74426089|74426316
ORF Type ORF4
Protein Length 74
Nucleotide Length 222
Protein Sequence MPTPAAYPRSSRGTGGQTGQLAIDSAVSRAQLRMGHFLFWADPMPAPFSLTLVTGAKCEVGLCCRGLWSVGIAE
Nucleotide Sequence CTGCCCACCCCTGCAGCCTACCCCAGGTCCAGCAGAGGAACAGGAGGCCAGACTGGCCAACTTGCTATAGACAGCGCCGTATCCAGAGCCCAACTGCGCATGGGTCATTTTCTCTTCTGGGCAGATCCTATGCCAGCACCTTTCTCTCTCACACTGGTGACTGGAGCCAAGTGCGAGGTTGGCCTTTGCTGCAGAGGCCTCTGGTCCGTGGGGATCGCTGAG

CircID chr2:74426089|74426316
ORF Type ORF5
Protein Length 34
Nucleotide Length 105
Protein Sequence MGRSYASTFLSHTGDWSQVRGWPLLQRPLVRGDR
Nucleotide Sequence CTGGGCAGATCCTATGCCAGCACCTTTCTCTCTCACACTGGTGACTGGAGCCAAGTGCGAGGTTGGCCTTTGCTGCAGAGGCCTCTGGTCCGTGGGGATCGCTGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites