CircRNA Information

General Information
circRNA Basic Information
CircID chr2:74427186|74427485
Strand +
CircType exon
Host Gene ENSG00000114993.14;
Algorism CIRI2;
Sequence AGAAAGTCGGGAAGCACTGCAGAGCTGGATGGAGGCTCTGTGGCAGCTTTTCTTTGACATGAGTAAGAGAGAAGGGGGCTGGGTTGAACCTTTGGGAAGAACTGGAGTTTGTCATTTTTACTAAAGGCCTCTGTTTCAAGATTATGTGGAAGGGAATGTAGCAGGAGAAAGGGCAGCCTGGCTCTCTCTTTTAATCAGCGCTCTTCTTCCAGGCCAATGGAAGCAGTGCTGTGATGAAATCATGAAAATTGAAACTCCTGCTCCCCGGAAACCACCCCAAGCACTGGCAAAGCAGGGGTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr2:74427186|74427485 hsa-miR-22-5p 0 0 1
chr2:74427186|74427485 hsa-miR-22-3p 0 0 1
chr2:74427186|74427485 hsa-miR-181c-5p 0 0 1
chr2:74427186|74427485 hsa-miR-181c-3p 0 0 1
chr2:74427186|74427485 hsa-miR-204-5p 0 0 1
chr2:74427186|74427485 hsa-miR-204-3p 0 0 1
chr2:74427186|74427485 hsa-miR-211-5p 0 0 1
chr2:74427186|74427485 hsa-miR-211-3p 0 0 1
chr2:74427186|74427485 hsa-miR-221-5p 0 0 1
chr2:74427186|74427485 hsa-miR-221-3p 0 0 1
chr2:74427186|74427485 hsa-miR-222-5p 0 0 1
chr2:74427186|74427485 hsa-miR-222-3p 0 0 1
chr2:74427186|74427485 hsa-miR-320a-5p 0 0 1
chr2:74427186|74427485 hsa-miR-320a-3p 0 0 1
chr2:74427186|74427485 hsa-miR-370-5p 0 0 1
chr2:74427186|74427485 hsa-miR-370-3p 0 0 1
chr2:74427186|74427485 hsa-miR-433-5p 0 0 1
chr2:74427186|74427485 hsa-miR-433-3p 0 0 1
chr2:74427186|74427485 hsa-miR-494-5p 0 0 1
chr2:74427186|74427485 hsa-miR-494-3p 0 0 1
chr2:74427186|74427485 hsa-miR-181d-5p 0 0 1
chr2:74427186|74427485 hsa-miR-181d-3p 0 0 1
chr2:74427186|74427485 hsa-miR-520f-5p 0 0 1
chr2:74427186|74427485 hsa-miR-520f-3p 0 0 1
chr2:74427186|74427485 hsa-miR-608 0 0 1
chr2:74427186|74427485 hsa-miR-623 0 0 1
chr2:74427186|74427485 hsa-miR-636 0 0 1
chr2:74427186|74427485 hsa-miR-938 0 0 1
chr2:74427186|74427485 hsa-miR-939-5p 0 0 1
chr2:74427186|74427485 hsa-miR-939-3p 0 0 1
chr2:74427186|74427485 hsa-miR-942-5p 0 0 1
chr2:74427186|74427485 hsa-miR-942-3p 0 0 1
chr2:74427186|74427485 hsa-miR-1180-5p 0 0 1
chr2:74427186|74427485 hsa-miR-1180-3p 0 0 1
chr2:74427186|74427485 hsa-miR-1202 1 0 1
chr2:74427186|74427485 hsa-miR-1205 0 0 1
chr2:74427186|74427485 hsa-miR-1293 0 0 1
chr2:74427186|74427485 hsa-miR-1825 0 0 1
chr2:74427186|74427485 hsa-miR-145-5p 0 0 1
chr2:74427186|74427485 hsa-miR-1184 0 0 1
chr2:74427186|74427485 hsa-miR-508-5p 0 0 1
chr2:74427186|74427485 hsa-miR-876-3p 0 0 1
chr2:74427186|74427485 hsa-miR-342-5p 0 0 1
chr2:74427186|74427485 hsa-miR-320b 0 0 1
chr2:74427186|74427485 hsa-miR-320c 0 0 1
chr2:74427186|74427485 hsa-miR-320d 0 0 1
chr2:74427186|74427485 hsa-miR-516a-3p 0 0 1
chr2:74427186|74427485 hsa-miR-548c-3p 0 0 1
chr2:74427186|74427485 hsa-miR-7 0 0 1
chr2:74427186|74427485 hsa-miR-181a 0 0 1
chr2:74427186|74427485 hsa-miR-181b 0 0 1
chr2:74427186|74427485 hsa-miR-1254 0 0 1
chr2:74427186|74427485 hsa-miR-3665 1 0 0
chr2:74427186|74427485 hsa-miR-4538 1 0 0
chr2:74427186|74427485 hsa-miR-4706 1 0 0
chr2:74427186|74427485 hsa-miR-8089 1 0 0
chr2:74427186|74427485 hsa-miR-12116 1 0 0
chr2:74427186|74427485 hsa-miR-4655-5p 1 0 0
chr2:74427186|74427485 hsa-miR-6782-5p 1 0 0
chr2:74427186|74427485 hsa-miR-5006-5p 1 0 0
chr2:74427186|74427485 hsa-miR-6882-3p 1 0 0
chr2:74427186|74427485 hsa-miR-4763-5p 1 0 0
chr2:74427186|74427485 hsa-miR-6784-5p 1 0 0
chr2:74427186|74427485 hsa-miR-4446-5p 1 0 0
chr2:74427186|74427485 hsa-miR-6811-3p 1 0 0
chr2:74427186|74427485 hsa-miR-2114-5p 1 0 0
chr2:74427186|74427485 hsa-miR-381-5p 1 0 0
chr2:74427186|74427485 hsa-miR-6812-5p 1 0 0
chr2:74427186|74427485 hsa-miR-6726-5p 1 0 0
chr2:74427186|74427485 hsa-miR-4728-5p 1 0 0
chr2:74427186|74427485 hsa-miR-328-5p 1 0 0
chr2:74427186|74427485 hsa-miR-4685-5p 1 0 0
chr2:74427186|74427485 hsa-miR-6777-5p 1 0 0
chr2:74427186|74427485 hsa-miR-4664-5p 1 0 0
chr2:74427186|74427485 hsa-miR-4667-5p 1 0 0
chr2:74427186|74427485 hsa-miR-6893-3p 1 0 0
chr2:74427186|74427485 hsa-miR-4661-5p 1 0 0
chr2:74427186|74427485 hsa-miR-6807-3p 1 0 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr2:74427186|74427485
ORF Type ORF1
Protein Length 41
Nucleotide Length 126
Protein Sequence MSFLLKASVSRLCGRECSRRKGSLALSFNQRSSSRPMEAVL
Nucleotide Sequence TTGTCATTTTTACTAAAGGCCTCTGTTTCAAGATTATGTGGAAGGGAATGTAGCAGGAGAAAGGGCAGCCTGGCTCTCTCTTTTAATCAGCGCTCTTCTTCCAGGCCAATGGAAGCAGTGCTGTGA
CircID chr2:74427186|74427485
ORF Type ORF2
Protein Length 35
Nucleotide Length 108
Protein Sequence MQSWMEALWQLFFDMSKREGGWVEPLGRTGVCHFY
Nucleotide Sequence CTGCAGAGCTGGATGGAGGCTCTGTGGCAGCTTTTCTTTGACATGAGTAAGAGAGAAGGGGGCTGGGTTGAACCTTTGGGAAGAACTGGAGTTTGTCATTTTTACTAA
CircID chr2:74427186|74427485
ORF Type ORF3
Protein Length 56
Nucleotide Length 168
Protein Sequence MFQDYVEGNVAGERAAWLSLLISALLPGQWKQCCDEIMKIETPAPRKPPQALAKQG
Nucleotide Sequence CTGTTTCAAGATTATGTGGAAGGGAATGTAGCAGGAGAAAGGGCAGCCTGGCTCTCTCTTTTAATCAGCGCTCTTCTTCCAGGCCAATGGAAGCAGTGCTGTGATGAAATCATGAAAATTGAAACTCCTGCTCCCCGGAAACCACCCCAAGCACTGGCAAAGCAGGGG
CircID chr2:74427186|74427485
ORF Type ORF4
Protein Length 25
Nucleotide Length 78
Protein Sequence MNLWEELEFVIFTKGLCFKIMWKGM
Nucleotide Sequence TTGAACCTTTGGGAAGAACTGGAGTTTGTCATTTTTACTAAAGGCCTCTGTTTCAAGATTATGTGGAAGGGAATGTAG
CircID chr2:74427186|74427485
ORF Type ORF5
Protein Length 33
Nucleotide Length 102
Protein Sequence MISSQHCFHWPGRRALIKRESQAALSPATFPST
Nucleotide Sequence ATGATTTCATCACAGCACTGCTTCCATTGGCCTGGAAGAAGAGCGCTGATTAAAAGAGAGAGCCAGGCTGCCCTTTCTCCTGCTACATTCCCTTCCACATAA
CircID chr2:74427186|74427485
ORF Type ORF6
Protein Length 58
Nucleotide Length 174
Protein Sequence MPFLLLHSLPHNLETEAFSKNDKLQFFPKVQPSPLLSYSCQRKAATEPPSSSAVLPDF
Nucleotide Sequence CTGCCCTTTCTCCTGCTACATTCCCTTCCACATAATCTTGAAACAGAGGCCTTTAGTAAAAATGACAAACTCCAGTTCTTCCCAAAGGTTCAACCCAGCCCCCTTCTCTCTTACTCATGTCAAAGAAAAGCTGCCACAGAGCCTCCATCCAGCTCTGCAGTGCTTCCCGACTTT
CircID chr2:74427186|74427485
ORF Type ORF7
Protein Length 34
Nucleotide Length 105
Protein Sequence MLCQCLGWFPGSRSFNFHDFITALLPLAWKKSAD
Nucleotide Sequence CTGCTTTGCCAGTGCTTGGGGTGGTTTCCGGGGAGCAGGAGTTTCAATTTTCATGATTTCATCACAGCACTGCTTCCATTGGCCTGGAAGAAGAGCGCTGATTAA
CircID chr2:74427186|74427485
ORF Type ORF8
Protein Length 46
Nucleotide Length 138
Protein Sequence MKQRPLVKMTNSSSSQRFNPAPFSLTHVKEKLPQSLHPALQCFPTF
Nucleotide Sequence TTGAAACAGAGGCCTTTAGTAAAAATGACAAACTCCAGTTCTTCCCAAAGGTTCAACCCAGCCCCCTTCTCTCTTACTCATGTCAAAGAAAAGCTGCCACAGAGCCTCCATCCAGCTCTGCAGTGCTTCCCGACTTTC
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab