CircRNA Information

General Information
circRNA Basic Information
CircID chr2:74462298|74462533
Strand -
CircType exon
Host Gene ENSG00000115275.10;
Algorism CIRI2;
Sequence CCGGGCTCGGGCCTCATCCCCCAGTATCTGCTCCCTCCCAATCCAGCCATCAGCATTTAGCAGCCCCAGCCAGTGGCCAAGGGCTTCCCGGGTGAGGGAGGGATCCCACCGCTGAACCACCAGCTGGTGAAAGCCTTCATCCCAAAGGAAGCCTCGTGGGAAGAATGACCGGGAGGGCACTGCTGTAAAAAGAGGTACGGGTGGAAAGAGGGCTGGGTCCACCTTCTGCTCAGACC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr2:74462298|74462533 hsa-miR-99a-5p 0 0 1
chr2:74462298|74462533 hsa-miR-99a-3p 0 0 1
chr2:74462298|74462533 hsa-miR-100-5p 0 0 1
chr2:74462298|74462533 hsa-miR-100-3p 0 0 1
chr2:74462298|74462533 hsa-miR-197-5p 0 0 1
chr2:74462298|74462533 hsa-miR-197-3p 0 0 1
chr2:74462298|74462533 hsa-miR-99b-5p 0 0 1
chr2:74462298|74462533 hsa-miR-99b-3p 0 0 1
chr2:74462298|74462533 hsa-miR-588 0 0 1
chr2:74462298|74462533 hsa-miR-625-5p 0 0 1
chr2:74462298|74462533 hsa-miR-625-3p 0 0 1
chr2:74462298|74462533 hsa-miR-637 1 1 1
chr2:74462298|74462533 hsa-miR-638 0 0 1
chr2:74462298|74462533 hsa-miR-662 0 0 1
chr2:74462298|74462533 hsa-miR-298 1 1 1
chr2:74462298|74462533 hsa-miR-892b 0 0 1
chr2:74462298|74462533 hsa-miR-1226-5p 0 0 1
chr2:74462298|74462533 hsa-miR-1226-3p 0 0 1
chr2:74462298|74462533 hsa-miR-1287-5p 0 0 1
chr2:74462298|74462533 hsa-miR-1287-3p 0 0 1
chr2:74462298|74462533 hsa-miR-1255a 0 0 1
chr2:74462298|74462533 hsa-miR-1275 1 1 1
chr2:74462298|74462533 hsa-miR-671-5p 1 1 1
chr2:74462298|74462533 hsa-miR-615-3p 0 1 1
chr2:74462298|74462533 hsa-miR-1207-3p 0 0 1
chr2:74462298|74462533 hsa-miR-188-3p 0 0 1
chr2:74462298|74462533 hsa-miR-876-3p 0 0 1
chr2:74462298|74462533 hsa-miR-769-3p 0 0 1
chr2:74462298|74462533 hsa-miR-450b-3p 0 1 1
chr2:74462298|74462533 hsa-miR-516a-3p 0 0 1
chr2:74462298|74462533 hsa-miR-1260 0 0 1
chr2:74462298|74462533 hsa-miR-323-5p 0 0 1
chr2:74462298|74462533 hsa-miR-1255b 0 0 1
chr2:74462298|74462533 hsa-miR-138 0 0 1
chr2:74462298|74462533 hsa-miR-129-3p 0 0 1
chr2:74462298|74462533 hsa-miR-923 0 0 1
chr2:74462298|74462533 hsa-miR-762 1 0 0
chr2:74462298|74462533 hsa-miR-3188 0 1 0
chr2:74462298|74462533 hsa-miR-4290 1 1 0
chr2:74462298|74462533 hsa-miR-3652 0 1 0
chr2:74462298|74462533 hsa-miR-4430 1 1 0
chr2:74462298|74462533 hsa-miR-4463 1 0 0
chr2:74462298|74462533 hsa-miR-4468 0 1 0
chr2:74462298|74462533 hsa-miR-4469 0 1 0
chr2:74462298|74462533 hsa-miR-3689c 0 1 0
chr2:74462298|74462533 hsa-miR-4505 1 1 0
chr2:74462298|74462533 hsa-miR-4507 1 0 0
chr2:74462298|74462533 hsa-miR-4510 0 1 0
chr2:74462298|74462533 hsa-miR-4525 1 0 0
chr2:74462298|74462533 hsa-miR-1587 1 0 0
chr2:74462298|74462533 hsa-miR-4739 1 0 0
chr2:74462298|74462533 hsa-miR-4741 1 0 0
chr2:74462298|74462533 hsa-miR-5787 1 1 0
chr2:74462298|74462533 hsa-miR-6081 1 0 0
chr2:74462298|74462533 hsa-miR-6085 1 0 0
chr2:74462298|74462533 hsa-miR-6127 0 1 0
chr2:74462298|74462533 hsa-miR-378j 0 1 0
chr2:74462298|74462533 hsa-miR-6130 0 1 0
chr2:74462298|74462533 hsa-miR-6133 0 1 0
chr2:74462298|74462533 hsa-miR-8075 0 1 0
chr2:74462298|74462533 hsa-miR-8089 1 0 0
chr2:74462298|74462533 hsa-miR-4747-3p 0 1 0
chr2:74462298|74462533 hsa-miR-4731-5p 0 1 0
chr2:74462298|74462533 hsa-miR-1247-3p 0 1 0
chr2:74462298|74462533 hsa-miR-6879-3p 1 0 0
chr2:74462298|74462533 hsa-miR-212-5p 0 1 0
chr2:74462298|74462533 hsa-miR-7106-5p 1 0 0
chr2:74462298|74462533 hsa-miR-6894-5p 1 0 0
chr2:74462298|74462533 hsa-miR-4687-3p 1 0 0
chr2:74462298|74462533 hsa-miR-6799-5p 1 0 0
chr2:74462298|74462533 hsa-miR-3692-5p 1 0 0
chr2:74462298|74462533 hsa-miR-5187-5p 0 1 0
chr2:74462298|74462533 hsa-miR-6875-3p 0 1 0
chr2:74462298|74462533 hsa-miR-4474-3p 1 0 0
chr2:74462298|74462533 hsa-miR-6842-3p 0 1 0
chr2:74462298|74462533 hsa-miR-3187-3p 1 0 0
chr2:74462298|74462533 hsa-miR-8069 1 0 0
chr2:74462298|74462533 hsa-miR-6849-3p 1 0 0
chr2:74462298|74462533 hsa-miR-659-3p 0 1 0
chr2:74462298|74462533 hsa-miR-6829-5p 1 1 0
chr2:74462298|74462533 hsa-miR-6798-5p 1 0 0
chr2:74462298|74462533 hsa-miR-30b-3p 0 1 0
chr2:74462298|74462533 hsa-miR-5008-5p 0 1 0
chr2:74462298|74462533 hsa-miR-6858-3p 1 0 0
chr2:74462298|74462533 hsa-miR-7109-5p 1 0 0
chr2:74462298|74462533 hsa-miR-1229-5p 1 0 0
chr2:74462298|74462533 hsa-miR-1228-5p 1 0 0
chr2:74462298|74462533 hsa-miR-296-3p 1 0 0
chr2:74462298|74462533 hsa-miR-4743-5p 1 0 0
chr2:74462298|74462533 hsa-miR-149-3p 1 1 0
chr2:74462298|74462533 hsa-miR-5010-5p 1 1 0
chr2:74462298|74462533 hsa-miR-4687-5p 0 1 0
chr2:74462298|74462533 hsa-miR-3944-5p 1 0 0
chr2:74462298|74462533 hsa-miR-4746-3p 1 0 0
chr2:74462298|74462533 hsa-miR-34a-5p 1 0 0
chr2:74462298|74462533 hsa-miR-130b-5p 0 1 0
chr2:74462298|74462533 hsa-miR-6734-3p 0 1 0
chr2:74462298|74462533 hsa-miR-371b-3p 0 1 0
chr2:74462298|74462533 hsa-miR-3689b-3p 0 1 0
chr2:74462298|74462533 hsa-miR-4763-3p 1 0 0
chr2:74462298|74462533 hsa-miR-6787-5p 1 0 0
chr2:74462298|74462533 hsa-miR-1343-5p 1 0 0
chr2:74462298|74462533 hsa-miR-5001-5p 1 0 0
chr2:74462298|74462533 hsa-miR-6743-5p 1 0 0
chr2:74462298|74462533 hsa-miR-6756-5p 1 0 0
chr2:74462298|74462533 hsa-miR-6803-5p 1 0 0
chr2:74462298|74462533 hsa-miR-1249-5p 1 1 0
chr2:74462298|74462533 hsa-miR-6751-5p 1 0 0
chr2:74462298|74462533 hsa-miR-6779-5p 1 1 0
chr2:74462298|74462533 hsa-miR-6780a-5p 1 1 0
chr2:74462298|74462533 hsa-miR-6797-5p 0 1 0
chr2:74462298|74462533 hsa-miR-3620-5p 1 0 0
chr2:74462298|74462533 hsa-miR-4728-5p 1 0 0
chr2:74462298|74462533 hsa-miR-3689a-3p 0 1 0
chr2:74462298|74462533 hsa-miR-6846-5p 1 0 0
chr2:74462298|74462533 hsa-miR-6848-5p 1 0 0
chr2:74462298|74462533 hsa-miR-6883-5p 0 1 0
chr2:74462298|74462533 hsa-miR-939-5p 1 1 0
chr2:74462298|74462533 hsa-miR-4665-5p 1 1 0
chr2:74462298|74462533 hsa-miR-4700-5p 1 0 0
chr2:74462298|74462533 hsa-miR-6766-5p 1 0 0
chr2:74462298|74462533 hsa-miR-6785-5p 1 1 0
chr2:74462298|74462533 hsa-miR-2682-3p 1 0 0
chr2:74462298|74462533 hsa-miR-6862-3p 0 1 0
chr2:74462298|74462533 hsa-miR-7114-3p 1 1 0
chr2:74462298|74462533 hsa-miR-33b-3p 1 0 0
chr2:74462298|74462533 hsa-miR-6781-3p 0 1 0
chr2:74462298|74462533 hsa-miR-6504-5p 1 1 0
chr2:74462298|74462533 hsa-miR-130a-5p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr2:74462298|74462533
ORF Type ORF1
Protein Length 58
Nucleotide Length 177
Protein Sequence MSRRWTQPSFHPYLFLQQCPPGHSSHEASFGMKAFTSWWFSGGIPPSPGKPLATGWGC
Nucleotide Sequence CTGAGCAGAAGGTGGACCCAGCCCTCTTTCCACCCGTACCTCTTTTTACAGCAGTGCCCTCCCGGTCATTCTTCCCACGAGGCTTCCTTTGGGATGAAGGCTTTCACCAGCTGGTGGTTCAGCGGTGGGATCCCTCCCTCACCCGGGAAGCCCTTGGCCACTGGCTGGGGCTGCTAA
CircID chr2:74462298|74462533
ORF Type ORF2
Protein Length 41
Nucleotide Length 123
Protein Sequence MVVQRWDPSLTREALGHWLGLLNADGWIGREQILGDEARAR
Nucleotide Sequence CTGGTGGTTCAGCGGTGGGATCCCTCCCTCACCCGGGAAGCCCTTGGCCACTGGCTGGGGCTGCTAAATGCTGATGGCTGGATTGGGAGGGAGCAGATACTGGGGGATGAGGCCCGAGCCCGG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab