CircRNA Information

General Information
circRNA Basic Information
CircID chr2:74490099|74490343
Strand +
CircType exon
Host Gene ENSG00000115282.18;
Algorism CIRI2;
Sequence TTGCGGAGACCACAGTAGGTGCCCAGTCCCTCAGCCCCCTTGCCCCTGTCACTCTGTCCAGTTGATTTCCCTTCATCATCCAAGTGGCCCAGGAGGTAATCTGTCAGGAGGGAGAAAGAGACAGGAAAGAAAGGACATGAGAGCGGGGTGCATCTGAGGGTCAGCCCTCCCAGGGTACCAGCCTCGATCCCTGGGCCCGGTCCCTGCACTCCCCACCATGGTGCCACAGCTGCAGCCGCCCGCTG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr2:74490099|74490343 hsa-miR-10a-5p 0 0 1
chr2:74490099|74490343 hsa-miR-10a-3p 0 0 1
chr2:74490099|74490343 hsa-miR-10b-5p 0 0 1
chr2:74490099|74490343 hsa-miR-10b-3p 0 0 1
chr2:74490099|74490343 hsa-miR-504-5p 0 0 1
chr2:74490099|74490343 hsa-miR-504-3p 0 0 1
chr2:74490099|74490343 hsa-miR-593-5p 0 0 1
chr2:74490099|74490343 hsa-miR-593-3p 0 0 1
chr2:74490099|74490343 hsa-miR-612 1 1 1
chr2:74490099|74490343 hsa-miR-638 1 1 1
chr2:74490099|74490343 hsa-miR-1301-5p 0 0 1
chr2:74490099|74490343 hsa-miR-1301-3p 0 0 1
chr2:74490099|74490343 hsa-miR-892a 0 0 1
chr2:74490099|74490343 hsa-miR-890 0 0 1
chr2:74490099|74490343 hsa-miR-541-5p 0 0 1
chr2:74490099|74490343 hsa-miR-541-3p 0 0 1
chr2:74490099|74490343 hsa-miR-939-5p 0 0 1
chr2:74490099|74490343 hsa-miR-939-3p 0 0 1
chr2:74490099|74490343 hsa-miR-1255a 0 0 1
chr2:74490099|74490343 hsa-miR-1263 0 1 1
chr2:74490099|74490343 hsa-miR-1272 0 0 1
chr2:74490099|74490343 hsa-miR-491-5p 0 0 1
chr2:74490099|74490343 hsa-miR-767-5p 0 1 1
chr2:74490099|74490343 hsa-miR-485-5p 0 0 1
chr2:74490099|74490343 hsa-miR-1184 0 0 1
chr2:74490099|74490343 hsa-miR-654-5p 0 0 1
chr2:74490099|74490343 hsa-miR-502-3p 0 0 1
chr2:74490099|74490343 hsa-miR-501-3p 0 0 1
chr2:74490099|74490343 hsa-miR-542-3p 0 0 1
chr2:74490099|74490343 hsa-miR-1255b 0 0 1
chr2:74490099|74490343 hsa-miR-1285 0 0 1
chr2:74490099|74490343 hsa-miR-184 1 0 0
chr2:74490099|74490343 hsa-miR-637 1 0 0
chr2:74490099|74490343 hsa-miR-663a 1 0 0
chr2:74490099|74490343 hsa-miR-658 1 0 0
chr2:74490099|74490343 hsa-miR-762 1 0 0
chr2:74490099|74490343 hsa-miR-3137 1 0 0
chr2:74490099|74490343 hsa-miR-3138 0 1 0
chr2:74490099|74490343 hsa-miR-3196 1 0 0
chr2:74490099|74490343 hsa-miR-3654 0 1 0
chr2:74490099|74490343 hsa-miR-3665 1 0 0
chr2:74490099|74490343 hsa-miR-3937 1 0 0
chr2:74490099|74490343 hsa-miR-3135b 1 0 0
chr2:74490099|74490343 hsa-miR-4467 1 0 0
chr2:74490099|74490343 hsa-miR-4469 1 0 0
chr2:74490099|74490343 hsa-miR-3689c 0 1 0
chr2:74490099|74490343 hsa-miR-4492 1 0 0
chr2:74490099|74490343 hsa-miR-4498 1 0 0
chr2:74490099|74490343 hsa-miR-4508 1 0 0
chr2:74490099|74490343 hsa-miR-4526 1 0 0
chr2:74490099|74490343 hsa-miR-3960 1 0 0
chr2:74490099|74490343 hsa-miR-4656 1 1 0
chr2:74490099|74490343 hsa-miR-4688 1 1 0
chr2:74490099|74490343 hsa-miR-4741 1 0 0
chr2:74490099|74490343 hsa-miR-5047 0 1 0
chr2:74490099|74490343 hsa-miR-5698 1 1 0
chr2:74490099|74490343 hsa-miR-5787 1 0 0
chr2:74490099|74490343 hsa-miR-6085 1 0 0
chr2:74490099|74490343 hsa-miR-6127 1 0 0
chr2:74490099|74490343 hsa-miR-6860 1 1 0
chr2:74490099|74490343 hsa-miR-9899 1 0 0
chr2:74490099|74490343 hsa-miR-12119 1 0 0
chr2:74490099|74490343 hsa-miR-211-3p 0 1 0
chr2:74490099|74490343 hsa-miR-17-3p 1 0 0
chr2:74490099|74490343 hsa-miR-6734-5p 0 1 0
chr2:74490099|74490343 hsa-miR-6861-5p 1 0 0
chr2:74490099|74490343 hsa-miR-4687-3p 1 0 0
chr2:74490099|74490343 hsa-miR-1236-5p 1 1 0
chr2:74490099|74490343 hsa-miR-5187-5p 1 0 0
chr2:74490099|74490343 hsa-miR-6089 1 0 0
chr2:74490099|74490343 hsa-miR-6880-5p 1 0 0
chr2:74490099|74490343 hsa-miR-7160-5p 1 1 0
chr2:74490099|74490343 hsa-miR-6727-5p 1 1 0
chr2:74490099|74490343 hsa-miR-6721-5p 1 0 0
chr2:74490099|74490343 hsa-miR-197-5p 1 0 0
chr2:74490099|74490343 hsa-miR-185-3p 1 1 0
chr2:74490099|74490343 hsa-miR-6829-5p 1 0 0
chr2:74490099|74490343 hsa-miR-6732-5p 1 0 0
chr2:74490099|74490343 hsa-miR-6805-5p 1 0 0
chr2:74490099|74490343 hsa-miR-6798-5p 1 0 0
chr2:74490099|74490343 hsa-miR-4753-3p 0 1 0
chr2:74490099|74490343 hsa-miR-6881-5p 1 0 0
chr2:74490099|74490343 hsa-miR-6786-5p 1 0 0
chr2:74490099|74490343 hsa-miR-5088-5p 1 0 0
chr2:74490099|74490343 hsa-miR-4640-5p 1 0 0
chr2:74490099|74490343 hsa-miR-1228-5p 1 1 0
chr2:74490099|74490343 hsa-miR-4690-5p 1 0 0
chr2:74490099|74490343 hsa-miR-3614-5p 0 1 0
chr2:74490099|74490343 hsa-miR-6749-5p 1 1 0
chr2:74490099|74490343 hsa-miR-6834-5p 1 1 0
chr2:74490099|74490343 hsa-miR-6818-3p 0 1 0
chr2:74490099|74490343 hsa-miR-6809-3p 0 1 0
chr2:74490099|74490343 hsa-miR-4446-3p 0 1 0
chr2:74490099|74490343 hsa-miR-6789-5p 1 0 0
chr2:74490099|74490343 hsa-miR-7156-3p 1 0 0
chr2:74490099|74490343 hsa-miR-6864-5p 0 1 0
chr2:74490099|74490343 hsa-miR-664b-5p 1 0 0
chr2:74490099|74490343 hsa-miR-660-3p 0 1 0
chr2:74490099|74490343 hsa-miR-6867-3p 0 1 0
chr2:74490099|74490343 hsa-miR-4750-5p 1 0 0
chr2:74490099|74490343 hsa-miR-891a-3p 0 1 0
chr2:74490099|74490343 hsa-miR-551b-5p 0 1 0
chr2:74490099|74490343 hsa-miR-5088-3p 1 0 0
chr2:74490099|74490343 hsa-miR-130b-5p 0 1 0
chr2:74490099|74490343 hsa-miR-7152-5p 0 1 0
chr2:74490099|74490343 hsa-miR-29c-5p 1 0 0
chr2:74490099|74490343 hsa-miR-4520-3p 0 1 0
chr2:74490099|74490343 hsa-miR-10400-5p 1 0 0
chr2:74490099|74490343 hsa-miR-1207-5p 1 1 0
chr2:74490099|74490343 hsa-miR-3689b-3p 0 1 0
chr2:74490099|74490343 hsa-miR-4763-3p 1 1 0
chr2:74490099|74490343 hsa-miR-6816-5p 1 0 0
chr2:74490099|74490343 hsa-miR-6775-5p 0 1 0
chr2:74490099|74490343 hsa-miR-5001-5p 0 1 0
chr2:74490099|74490343 hsa-miR-6726-5p 1 0 0
chr2:74490099|74490343 hsa-miR-6743-5p 1 1 0
chr2:74490099|74490343 hsa-miR-6756-5p 1 0 0
chr2:74490099|74490343 hsa-miR-6803-5p 1 1 0
chr2:74490099|74490343 hsa-miR-6813-5p 1 0 0
chr2:74490099|74490343 hsa-miR-1249-5p 1 0 0
chr2:74490099|74490343 hsa-miR-6722-3p 1 1 0
chr2:74490099|74490343 hsa-miR-6763-5p 0 1 0
chr2:74490099|74490343 hsa-miR-6779-5p 0 1 0
chr2:74490099|74490343 hsa-miR-6780a-5p 0 1 0
chr2:74490099|74490343 hsa-miR-6797-5p 1 0 0
chr2:74490099|74490343 hsa-miR-3127-3p 1 0 0
chr2:74490099|74490343 hsa-miR-1915-3p 0 1 0
chr2:74490099|74490343 hsa-miR-3620-5p 1 0 0
chr2:74490099|74490343 hsa-miR-5189-5p 1 1 0
chr2:74490099|74490343 hsa-miR-5196-5p 1 0 0
chr2:74490099|74490343 hsa-miR-10526-3p 1 1 0
chr2:74490099|74490343 hsa-miR-1237-5p 1 0 0
chr2:74490099|74490343 hsa-miR-1909-3p 1 1 0
chr2:74490099|74490343 hsa-miR-328-5p 1 0 0
chr2:74490099|74490343 hsa-miR-3689a-3p 0 1 0
chr2:74490099|74490343 hsa-miR-4649-5p 1 0 0
chr2:74490099|74490343 hsa-miR-4749-5p 1 1 0
chr2:74490099|74490343 hsa-miR-6729-5p 1 1 0
chr2:74490099|74490343 hsa-miR-6794-5p 1 0 0
chr2:74490099|74490343 hsa-miR-6846-5p 1 1 0
chr2:74490099|74490343 hsa-miR-6848-5p 1 1 0
chr2:74490099|74490343 hsa-miR-6889-5p 1 1 0
chr2:74490099|74490343 hsa-miR-3187-5p 1 1 0
chr2:74490099|74490343 hsa-miR-5586-3p 0 1 0
chr2:74490099|74490343 hsa-miR-365b-5p 1 0 0
chr2:74490099|74490343 hsa-miR-4646-5p 1 0 0
chr2:74490099|74490343 hsa-miR-6791-5p 0 1 0
chr2:74490099|74490343 hsa-miR-4756-5p 0 1 0
chr2:74490099|74490343 hsa-miR-6783-3p 0 1 0
chr2:74490099|74490343 hsa-miR-6876-3p 0 1 0
chr2:74490099|74490343 hsa-miR-5699-3p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr2:74490099|74490343
ORF Type ORF1
Protein Length 30
Nucleotide Length 90
Protein Sequence MRVSPPRVPASIPGPGPCTPHHGATAAAAR
Nucleotide Sequence CTGAGGGTCAGCCCTCCCAGGGTACCAGCCTCGATCCCTGGGCCCGGTCCCTGCACTCCCCACCATGGTGCCACAGCTGCAGCCGCCCGC
CircID chr2:74490099|74490343
ORF Type ORF2
Protein Length 31
Nucleotide Length 96
Protein Sequence MISLHHPSGPGGNLSGGRKRQERKDMRAGCI
Nucleotide Sequence TTGATTTCCCTTCATCATCCAAGTGGCCCAGGAGGTAATCTGTCAGGAGGGAGAAAGAGACAGGAAAGAAAGGACATGAGAGCGGGGTGCATCTGA
CircID chr2:74490099|74490343
ORF Type ORF3
Protein Length 57
Nucleotide Length 171
Protein Sequence MGGLTLRCTPLSCPFFPVSFSLLTDYLLGHLDDEGKSTGQSDRGKGAEGLGTYCGLR
Nucleotide Sequence CTGGGAGGGCTGACCCTCAGATGCACCCCGCTCTCATGTCCTTTCTTTCCTGTCTCTTTCTCCCTCCTGACAGATTACCTCCTGGGCCACTTGGATGATGAAGGGAAATCAACTGGACAGAGTGACAGGGGCAAGGGGGCTGAGGGACTGGGCACCTACTGTGGTCTCCGC
CircID chr2:74490099|74490343
ORF Type ORF4
Protein Length 26
Nucleotide Length 78
Protein Sequence MMKGNQLDRVTGARGLRDWAPTVVSA
Nucleotide Sequence ATGATGAAGGGAAATCAACTGGACAGAGTGACAGGGGCAAGGGGGCTGAGGGACTGGGCACCTACTGTGGTCTCCGCA
CircID chr2:74490099|74490343
ORF Type ORF5
Protein Length 47
Nucleotide Length 144
Protein Sequence MVGSAGTGPRDRGWYPGRADPQMHPALMSFLSCLFLPPDRLPPGPLG
Nucleotide Sequence ATGGTGGGGAGTGCAGGGACCGGGCCCAGGGATCGAGGCTGGTACCCTGGGAGGGCTGACCCTCAGATGCACCCCGCTCTCATGTCCTTTCTTTCCTGTCTCTTTCTCCCTCCTGACAGATTACCTCCTGGGCCACTTGGATGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab