CircRNA Information

General Information
circRNA Basic Information
CircID chr2:74526664|74526821
Strand -
CircType exon
Host Gene ENSG00000115307.15;
Algorism CIRI2;
Sequence CATGAATTTAATGTGACATTGGGGGAGCCTCATCCTTCCCTTTTTACCACCCACCCATCCAGCCTGTTGTGAGTTGGGTGAGGGCTGCCCCCAGTCTCCGTCCTGCGGCTCTGGGTGCCATCCTGTTCCTTTGAGCTCAGTCAGCCTCCTGGGCTCGT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr2:74526664|74526821 hsa-miR-23a-5p 0 0 1
chr2:74526664|74526821 hsa-miR-23a-3p 0 0 1
chr2:74526664|74526821 hsa-miR-183-5p 0 0 1
chr2:74526664|74526821 hsa-miR-183-3p 0 0 1
chr2:74526664|74526821 hsa-miR-23b-5p 0 0 1
chr2:74526664|74526821 hsa-miR-23b-3p 0 0 1
chr2:74526664|74526821 hsa-miR-184 0 1 1
chr2:74526664|74526821 hsa-miR-637 0 0 1
chr2:74526664|74526821 hsa-miR-665 1 1 1
chr2:74526664|74526821 hsa-miR-1286 0 1 1
chr2:74526664|74526821 hsa-miR-1287-5p 0 0 1
chr2:74526664|74526821 hsa-miR-1287-3p 0 0 1
chr2:74526664|74526821 hsa-miR-1293 0 0 1
chr2:74526664|74526821 hsa-miR-1255a 0 0 1
chr2:74526664|74526821 hsa-miR-486-3p 0 1 1
chr2:74526664|74526821 hsa-miR-485-5p 0 1 1
chr2:74526664|74526821 hsa-miR-361-3p 0 0 1
chr2:74526664|74526821 hsa-miR-1255b 0 0 1
chr2:74526664|74526821 hsa-miR-608 1 0 0
chr2:74526664|74526821 hsa-miR-638 1 0 0
chr2:74526664|74526821 hsa-miR-762 1 0 0
chr2:74526664|74526821 hsa-miR-3155a 1 0 0
chr2:74526664|74526821 hsa-miR-3652 1 1 0
chr2:74526664|74526821 hsa-miR-3918 1 1 0
chr2:74526664|74526821 hsa-miR-3929 0 1 0
chr2:74526664|74526821 hsa-miR-4430 0 1 0
chr2:74526664|74526821 hsa-miR-4436a 1 0 0
chr2:74526664|74526821 hsa-miR-4439 0 1 0
chr2:74526664|74526821 hsa-miR-3135b 1 0 0
chr2:74526664|74526821 hsa-miR-4463 0 1 0
chr2:74526664|74526821 hsa-miR-4478 0 1 0
chr2:74526664|74526821 hsa-miR-3155b 1 0 0
chr2:74526664|74526821 hsa-miR-4498 1 0 0
chr2:74526664|74526821 hsa-miR-4505 1 0 0
chr2:74526664|74526821 hsa-miR-4506 1 0 0
chr2:74526664|74526821 hsa-miR-2392 1 1 0
chr2:74526664|74526821 hsa-miR-4514 1 0 0
chr2:74526664|74526821 hsa-miR-4526 1 0 0
chr2:74526664|74526821 hsa-miR-4651 1 0 0
chr2:74526664|74526821 hsa-miR-4656 1 0 0
chr2:74526664|74526821 hsa-miR-5787 1 0 0
chr2:74526664|74526821 hsa-miR-12120 0 1 0
chr2:74526664|74526821 hsa-miR-432-3p 1 0 0
chr2:74526664|74526821 hsa-miR-6840-3p 0 1 0
chr2:74526664|74526821 hsa-miR-6861-5p 1 0 0
chr2:74526664|74526821 hsa-miR-6894-5p 1 0 0
chr2:74526664|74526821 hsa-miR-25-5p 0 1 0
chr2:74526664|74526821 hsa-miR-4695-5p 0 1 0
chr2:74526664|74526821 hsa-miR-6776-5p 1 0 0
chr2:74526664|74526821 hsa-miR-6748-5p 1 1 0
chr2:74526664|74526821 hsa-miR-6793-5p 1 0 0
chr2:74526664|74526821 hsa-miR-185-3p 1 0 0
chr2:74526664|74526821 hsa-miR-6798-5p 0 1 0
chr2:74526664|74526821 hsa-miR-6782-5p 1 0 0
chr2:74526664|74526821 hsa-miR-5088-5p 1 0 0
chr2:74526664|74526821 hsa-miR-1226-5p 1 0 0
chr2:74526664|74526821 hsa-miR-3944-3p 1 0 0
chr2:74526664|74526821 hsa-miR-4690-5p 1 0 0
chr2:74526664|74526821 hsa-miR-92b-5p 0 1 0
chr2:74526664|74526821 hsa-miR-4743-5p 1 0 0
chr2:74526664|74526821 hsa-miR-4446-3p 1 0 0
chr2:74526664|74526821 hsa-miR-6886-5p 1 1 0
chr2:74526664|74526821 hsa-miR-6826-5p 1 0 0
chr2:74526664|74526821 hsa-miR-4687-5p 0 1 0
chr2:74526664|74526821 hsa-miR-6857-3p 0 1 0
chr2:74526664|74526821 hsa-miR-5003-5p 0 1 0
chr2:74526664|74526821 hsa-miR-6769b-5p 1 1 0
chr2:74526664|74526821 hsa-miR-5001-5p 1 0 0
chr2:74526664|74526821 hsa-miR-6756-5p 1 1 0
chr2:74526664|74526821 hsa-miR-6769a-5p 1 0 0
chr2:74526664|74526821 hsa-miR-6813-5p 1 0 0
chr2:74526664|74526821 hsa-miR-7107-5p 1 0 0
chr2:74526664|74526821 hsa-miR-5196-5p 0 1 0
chr2:74526664|74526821 hsa-miR-6883-5p 1 0 0
chr2:74526664|74526821 hsa-miR-1238-5p 1 0 0
chr2:74526664|74526821 hsa-miR-4769-5p 1 0 0
chr2:74526664|74526821 hsa-miR-7151-3p 1 1 0
chr2:74526664|74526821 hsa-miR-6784-3p 0 1 0
chr2:74526664|74526821 hsa-miR-6862-3p 0 1 0
chr2:74526664|74526821 hsa-miR-1295b-5p 0 1 0
chr2:74526664|74526821 hsa-miR-3619-5p 1 0 0
chr2:74526664|74526821 hsa-miR-3136-5p 0 1 0
chr2:74526664|74526821 hsa-miR-1912-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr2:74526664|74526821
ORF Type ORF1
Protein Length 28
Nucleotide Length 84
Protein Sequence MGEGCPQSPSCGSGCHPVPLSSVSLLGS
Nucleotide Sequence TTGGGTGAGGGCTGCCCCCAGTCTCCGTCCTGCGGCTCTGGGTGCCATCCTGTTCCTTTGAGCTCAGTCAGCCTCCTGGGCTCG
CircID chr2:74526664|74526821
ORF Type ORF2
Protein Length 36
Nucleotide Length 111
Protein Sequence MSSKEQDGTQSRRTETGGSPHPTHNRLDGWVVKREG
Nucleotide Sequence CTGAGCTCAAAGGAACAGGATGGCACCCAGAGCCGCAGGACGGAGACTGGGGGCAGCCCTCACCCAACTCACAACAGGCTGGATGGGTGGGTGGTAAAAAGGGAAGGATGA
CircID chr2:74526664|74526821
ORF Type ORF3
Protein Length 25
Nucleotide Length 78
Protein Sequence MAPRAAGRRLGAALTQLTTGWMGGW
Nucleotide Sequence ATGGCACCCAGAGCCGCAGGACGGAGACTGGGGGCAGCCCTCACCCAACTCACAACAGGCTGGATGGGTGGGTGGTAA
CircID chr2:74526664|74526821
ORF Type ORF4
Protein Length 48
Nucleotide Length 144
Protein Sequence MTELKGTGWHPEPQDGDWGQPSPNSQQAGWVGGKKGRMRLPQCHIKFM
Nucleotide Sequence CTGACTGAGCTCAAAGGAACAGGATGGCACCCAGAGCCGCAGGACGGAGACTGGGGGCAGCCCTCACCCAACTCACAACAGGCTGGATGGGTGGGTGGTAAAAAGGGAAGGATGAGGCTCCCCCAATGTCACATTAAATTCATG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab