CircRNA Information

General Information
circRNA Basic Information
CircID chr2:74556653|74556828
Strand +
CircType exon
Host Gene ENSG00000115325.12;
Algorism CIRI2;
Sequence CATGCATCCTTGGGCTCCCGAGGCAGATCATAAAGGCCCTGGGGAGGGACTGGGGCCAGGCCCTCAGGTTCATCATAGATGGGATCCTCTTTGGGGTCTGTCAGCTTGGCCTTCAGCAACTGCTGCTGCGCATGCTCATACAAGTCCCAATAGAGAGGTTTCTTCCGTTGTACTCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr2:74556653|74556828 hsa-miR-15a-5p 0 0 1
chr2:74556653|74556828 hsa-miR-15a-3p 0 0 1
chr2:74556653|74556828 hsa-miR-15b-5p 0 0 1
chr2:74556653|74556828 hsa-miR-15b-3p 0 0 1
chr2:74556653|74556828 hsa-miR-191-5p 0 0 1
chr2:74556653|74556828 hsa-miR-191-3p 0 0 1
chr2:74556653|74556828 hsa-miR-195-5p 0 0 1
chr2:74556653|74556828 hsa-miR-195-3p 0 0 1
chr2:74556653|74556828 hsa-miR-424-5p 0 0 1
chr2:74556653|74556828 hsa-miR-424-3p 0 0 1
chr2:74556653|74556828 hsa-miR-497-5p 0 0 1
chr2:74556653|74556828 hsa-miR-497-3p 0 0 1
chr2:74556653|74556828 hsa-miR-583 0 1 1
chr2:74556653|74556828 hsa-miR-643 0 1 1
chr2:74556653|74556828 hsa-miR-297 0 0 1
chr2:74556653|74556828 hsa-miR-1272 0 0 1
chr2:74556653|74556828 hsa-miR-1322 0 0 1
chr2:74556653|74556828 hsa-miR-556-5p 0 0 1
chr2:74556653|74556828 hsa-miR-628-5p 0 0 1
chr2:74556653|74556828 hsa-miR-1302 0 0 1
chr2:74556653|74556828 hsa-miR-16 0 0 1
chr2:74556653|74556828 hsa-miR-2861 0 1 0
chr2:74556653|74556828 hsa-miR-3149 0 1 0
chr2:74556653|74556828 hsa-miR-4512 0 1 0
chr2:74556653|74556828 hsa-miR-5047 1 0 0
chr2:74556653|74556828 hsa-miR-6126 0 1 0
chr2:74556653|74556828 hsa-miR-8052 1 0 0
chr2:74556653|74556828 hsa-miR-6749-3p 1 0 0
chr2:74556653|74556828 hsa-miR-7160-5p 0 1 0
chr2:74556653|74556828 hsa-miR-874-5p 0 1 0
chr2:74556653|74556828 hsa-miR-3189-5p 1 0 0
chr2:74556653|74556828 hsa-miR-4655-3p 1 0 0
chr2:74556653|74556828 hsa-miR-6827-5p 0 1 0
chr2:74556653|74556828 hsa-miR-1226-5p 0 1 0
chr2:74556653|74556828 hsa-miR-5001-3p 0 1 0
chr2:74556653|74556828 hsa-miR-6771-5p 0 1 0
chr2:74556653|74556828 hsa-miR-2114-5p 0 1 0
chr2:74556653|74556828 hsa-miR-519d-5p 0 1 0
chr2:74556653|74556828 hsa-miR-6814-5p 0 1 0
chr2:74556653|74556828 hsa-miR-6895-3p 1 1 0
chr2:74556653|74556828 hsa-miR-365a-5p 0 1 0
chr2:74556653|74556828 hsa-miR-365b-5p 0 1 0
chr2:74556653|74556828 hsa-miR-3085-5p 1 0 0
chr2:74556653|74556828 hsa-miR-10396b-3p 0 1 0
chr2:74556653|74556828 hsa-miR-6764-5p 0 1 0
chr2:74556653|74556828 hsa-miR-6838-5p 1 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr2:74556653|74556828
ORF Type ORF1
Protein Length 58
Nucleotide Length 174
Protein Sequence MHPWAPEADHKGPGEGLGPGPQVHHRWDPLWGLSAWPSATAAAHAHTSPNREVSSVVL
Nucleotide Sequence ATGCATCCTTGGGCTCCCGAGGCAGATCATAAAGGCCCTGGGGAGGGACTGGGGCCAGGCCCTCAGGTTCATCATAGATGGGATCCTCTTTGGGGTCTGTCAGCTTGGCCTTCAGCAACTGCTGCTGCGCATGCTCATACAAGTCCCAATAGAGAGGTTTCTTCCGTTGTACTC

CircID chr2:74556653|74556828
ORF Type ORF2
Protein Length 46
Nucleotide Length 138
Protein Sequence MGRDWGQALRFIIDGILFGVCQLGLQQLLLRMLIQVPIERFLPLYS
Nucleotide Sequence CTGGGGAGGGACTGGGGCCAGGCCCTCAGGTTCATCATAGATGGGATCCTCTTTGGGGTCTGTCAGCTTGGCCTTCAGCAACTGCTGCTGCGCATGCTCATACAAGTCCCAATAGAGAGGTTTCTTCCGTTGTACTCC

CircID chr2:74556653|74556828
ORF Type ORF3
Protein Length 47
Nucleotide Length 141
Protein Sequence MYEHAQQQLLKAKLTDPKEDPIYDEPEGLAPVPPQGLYDLPREPKDA
Nucleotide Sequence TTGTATGAGCATGCGCAGCAGCAGTTGCTGAAGGCCAAGCTGACAGACCCCAAAGAGGATCCCATCTATGATGAACCTGAGGGCCTGGCCCCAGTCCCTCCCCAGGGCCTTTATGATCTGCCTCGGGAGCCCAAGGATGCA

CircID chr2:74556653|74556828
ORF Type ORF4
Protein Length 25
Nucleotide Length 75
Protein Sequence MMNLRAWPQSLPRAFMICLGSPRMH
Nucleotide Sequence ATGATGAACCTGAGGGCCTGGCCCCAGTCCCTCCCCAGGGCCTTTATGATCTGCCTCGGGAGCCCAAGGATGCAT

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites