CircRNA Information

General Information
circRNA Basic Information
CircID chr2:74680000|74680168
Strand -
CircType exon
Host Gene ENSG00000135622.11;
Algorism CIRI2;
Sequence CTGGGGGCTCCACCTTCTGGGACCACAAGCTACAGCCAAGACCCTCCCTCCCCCTCTCCTGAAGATGAGCGGTTGCCGCTGGCCCTGGCCAAGAGGGGCAGTGGCTTTGGTGGATTCTCACCACCCTTCCTGCTTGATCCTTGCCCAAGCCCAGCCCACATTCGGCTAA
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr2:74680000|74680168 hsa-miR-580-5p 0 0 1
chr2:74680000|74680168 hsa-miR-580-3p 0 0 1
chr2:74680000|74680168 hsa-miR-588 0 0 1
chr2:74680000|74680168 hsa-miR-635 0 0 1
chr2:74680000|74680168 hsa-miR-647 0 0 1
chr2:74680000|74680168 hsa-miR-1182 0 1 1
chr2:74680000|74680168 hsa-miR-1293 0 0 1
chr2:74680000|74680168 hsa-miR-1321 0 0 1
chr2:74680000|74680168 hsa-miR-1225-3p 0 0 1
chr2:74680000|74680168 hsa-miR-299-3p 0 1 1
chr2:74680000|74680168 hsa-miR-193a-5p 0 0 1
chr2:74680000|74680168 hsa-miR-361-3p 0 0 1
chr2:74680000|74680168 hsa-miR-324-3p 0 1 1
chr2:74680000|74680168 hsa-miR-608 1 0 0
chr2:74680000|74680168 hsa-miR-663a 1 0 0
chr2:74680000|74680168 hsa-miR-762 1 1 0
chr2:74680000|74680168 hsa-miR-665 0 1 0
chr2:74680000|74680168 hsa-miR-940 1 0 0
chr2:74680000|74680168 hsa-miR-1268a 1 0 0
chr2:74680000|74680168 hsa-miR-1913 0 1 0
chr2:74680000|74680168 hsa-miR-3137 0 1 0
chr2:74680000|74680168 hsa-miR-3147 1 0 0
chr2:74680000|74680168 hsa-miR-4296 0 1 0
chr2:74680000|74680168 hsa-miR-4322 1 1 0
chr2:74680000|74680168 hsa-miR-4265 1 1 0
chr2:74680000|74680168 hsa-miR-4281 1 0 0
chr2:74680000|74680168 hsa-miR-3943 0 1 0
chr2:74680000|74680168 hsa-miR-1268b 1 0 0
chr2:74680000|74680168 hsa-miR-378g 0 1 0
chr2:74680000|74680168 hsa-miR-4481 1 0 0
chr2:74680000|74680168 hsa-miR-4492 1 1 0
chr2:74680000|74680168 hsa-miR-4498 1 1 0
chr2:74680000|74680168 hsa-miR-4505 1 1 0
chr2:74680000|74680168 hsa-miR-4507 1 1 0
chr2:74680000|74680168 hsa-miR-4514 1 0 0
chr2:74680000|74680168 hsa-miR-1587 1 1 0
chr2:74680000|74680168 hsa-miR-4651 1 0 0
chr2:74680000|74680168 hsa-miR-4656 1 0 0
chr2:74680000|74680168 hsa-miR-4673 1 0 0
chr2:74680000|74680168 hsa-miR-4706 1 0 0
chr2:74680000|74680168 hsa-miR-4739 1 0 0
chr2:74680000|74680168 hsa-miR-4741 1 0 0
chr2:74680000|74680168 hsa-miR-4748 1 0 0
chr2:74680000|74680168 hsa-miR-5698 1 0 0
chr2:74680000|74680168 hsa-miR-5787 1 1 0
chr2:74680000|74680168 hsa-miR-6069 1 1 0
chr2:74680000|74680168 hsa-miR-6090 1 0 0
chr2:74680000|74680168 hsa-miR-6129 0 1 0
chr2:74680000|74680168 hsa-miR-6130 0 1 0
chr2:74680000|74680168 hsa-miR-6133 1 1 0
chr2:74680000|74680168 hsa-miR-6165 0 1 0
chr2:74680000|74680168 hsa-miR-6860 1 0 0
chr2:74680000|74680168 hsa-miR-7974 1 0 0
chr2:74680000|74680168 hsa-miR-4433b-3p 1 0 0
chr2:74680000|74680168 hsa-miR-6809-5p 0 1 0
chr2:74680000|74680168 hsa-miR-4433a-3p 1 1 0
chr2:74680000|74680168 hsa-miR-7106-5p 1 0 0
chr2:74680000|74680168 hsa-miR-6825-5p 1 0 0
chr2:74680000|74680168 hsa-miR-6894-5p 1 0 0
chr2:74680000|74680168 hsa-miR-125a-3p 1 0 0
chr2:74680000|74680168 hsa-miR-6799-5p 1 0 0
chr2:74680000|74680168 hsa-miR-6746-5p 1 0 0
chr2:74680000|74680168 hsa-miR-3622b-5p 1 0 0
chr2:74680000|74680168 hsa-miR-6842-3p 1 0 0
chr2:74680000|74680168 hsa-miR-6759-5p 1 0 0
chr2:74680000|74680168 hsa-miR-6721-5p 1 0 0
chr2:74680000|74680168 hsa-miR-6742-5p 1 0 0
chr2:74680000|74680168 hsa-miR-6793-5p 1 0 0
chr2:74680000|74680168 hsa-miR-6732-5p 1 0 0
chr2:74680000|74680168 hsa-miR-6805-5p 1 0 0
chr2:74680000|74680168 hsa-miR-6798-5p 1 0 0
chr2:74680000|74680168 hsa-miR-6760-5p 1 0 0
chr2:74680000|74680168 hsa-miR-6881-5p 1 0 0
chr2:74680000|74680168 hsa-miR-6782-5p 1 1 0
chr2:74680000|74680168 hsa-miR-7855-5p 0 1 0
chr2:74680000|74680168 hsa-miR-6735-3p 1 0 0
chr2:74680000|74680168 hsa-miR-6740-5p 1 0 0
chr2:74680000|74680168 hsa-miR-1229-5p 1 0 0
chr2:74680000|74680168 hsa-miR-4640-5p 1 1 0
chr2:74680000|74680168 hsa-miR-1228-5p 1 0 0
chr2:74680000|74680168 hsa-miR-296-3p 1 0 0
chr2:74680000|74680168 hsa-miR-149-3p 1 1 0
chr2:74680000|74680168 hsa-miR-1225-5p 1 0 0
chr2:74680000|74680168 hsa-miR-4661-3p 0 1 0
chr2:74680000|74680168 hsa-miR-4749-3p 0 1 0
chr2:74680000|74680168 hsa-miR-4746-5p 1 0 0
chr2:74680000|74680168 hsa-miR-1207-5p 1 0 0
chr2:74680000|74680168 hsa-miR-4763-3p 1 0 0
chr2:74680000|74680168 hsa-miR-6787-5p 1 0 0
chr2:74680000|74680168 hsa-miR-6816-5p 1 0 0
chr2:74680000|74680168 hsa-miR-6870-5p 1 1 0
chr2:74680000|74680168 hsa-miR-6893-5p 1 0 0
chr2:74680000|74680168 hsa-miR-1343-5p 1 0 0
chr2:74680000|74680168 hsa-miR-5001-5p 1 1 0
chr2:74680000|74680168 hsa-miR-6743-5p 1 0 0
chr2:74680000|74680168 hsa-miR-6752-5p 1 0 0
chr2:74680000|74680168 hsa-miR-6754-5p 0 1 0
chr2:74680000|74680168 hsa-miR-6756-5p 1 0 0
chr2:74680000|74680168 hsa-miR-6819-5p 1 0 0
chr2:74680000|74680168 hsa-miR-10401-5p 1 0 0
chr2:74680000|74680168 hsa-miR-1249-5p 1 1 0
chr2:74680000|74680168 hsa-miR-6774-5p 1 1 0
chr2:74680000|74680168 hsa-miR-6779-5p 1 0 0
chr2:74680000|74680168 hsa-miR-6780a-5p 1 0 0
chr2:74680000|74680168 hsa-miR-6797-5p 1 1 0
chr2:74680000|74680168 hsa-miR-6808-5p 1 0 0
chr2:74680000|74680168 hsa-miR-6875-5p 1 0 0
chr2:74680000|74680168 hsa-miR-6879-5p 1 0 0
chr2:74680000|74680168 hsa-miR-7111-5p 1 1 0
chr2:74680000|74680168 hsa-miR-3620-5p 1 1 0
chr2:74680000|74680168 hsa-miR-4728-5p 1 1 0
chr2:74680000|74680168 hsa-miR-5189-5p 1 0 0
chr2:74680000|74680168 hsa-miR-5196-5p 1 0 0
chr2:74680000|74680168 hsa-miR-6780b-5p 1 0 0
chr2:74680000|74680168 hsa-miR-10396b-5p 1 0 0
chr2:74680000|74680168 hsa-miR-328-5p 1 0 0
chr2:74680000|74680168 hsa-miR-4649-5p 1 0 0
chr2:74680000|74680168 hsa-miR-4685-5p 1 0 0
chr2:74680000|74680168 hsa-miR-4725-3p 1 0 0
chr2:74680000|74680168 hsa-miR-4726-5p 1 1 0
chr2:74680000|74680168 hsa-miR-6729-5p 1 0 0
chr2:74680000|74680168 hsa-miR-6794-5p 1 1 0
chr2:74680000|74680168 hsa-miR-6795-5p 1 0 0
chr2:74680000|74680168 hsa-miR-6846-5p 1 0 0
chr2:74680000|74680168 hsa-miR-6848-5p 1 0 0
chr2:74680000|74680168 hsa-miR-6883-5p 1 1 0
chr2:74680000|74680168 hsa-miR-939-5p 1 0 0
chr2:74680000|74680168 hsa-miR-3940-5p 1 0 0
chr2:74680000|74680168 hsa-miR-4747-5p 1 0 0
chr2:74680000|74680168 hsa-miR-6891-5p 1 0 0
chr2:74680000|74680168 hsa-miR-4716-3p 0 1 0
chr2:74680000|74680168 hsa-miR-6785-5p 1 1 0
chr2:74680000|74680168 hsa-miR-6837-5p 1 1 0
chr2:74680000|74680168 hsa-miR-6848-3p 1 0 0
chr2:74680000|74680168 hsa-miR-3619-5p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr2:74680000|74680168
ORF Type ORF1
Protein Length 56
Nucleotide Length 168
Protein Sequence LGAPPSGTTSYSQDPPSPSPEDERLPLALAKRGSGFGGFSPPFLLDPCPSPAHIRL
Nucleotide Sequence CTGGGGGCTCCACCTTCTGGGACCACAAGCTACAGCCAAGACCCTCCCTCCCCCTCTCCTGAAGATGAGCGGTTGCCGCTGGCCCTGGCCAAGAGGGGCAGTGGCTTTGGTGGATTCTCACCACCCTTCCTGCTTGATCCTTGCCCAAGCCCAGCCCACATTCGGCTA
CircID chr2:74680000|74680168
ORF Type ORF2
Protein Length 50
Nucleotide Length 153
Protein Sequence MGPQATAKTLPPPLLKMSGCRWPWPRGAVALVDSHHPSCLILAQAQPTFG
Nucleotide Sequence CTGGGACCACAAGCTACAGCCAAGACCCTCCCTCCCCCTCTCCTGAAGATGAGCGGTTGCCGCTGGCCCTGGCCAAGAGGGGCAGTGGCTTTGGTGGATTCTCACCACCCTTCCTGCTTGATCCTTGCCCAAGCCCAGCCCACATTCGGCTAA
CircID chr2:74680000|74680168
ORF Type ORF3
Protein Length 51
Nucleotide Length 153
Protein Sequence MGLGKDQAGRVVRIHQSHCPSWPGPAATAHLQERGREGLGCSLWSQKVEPP
Nucleotide Sequence CTGGGCTTGGGCAAGGATCAAGCAGGAAGGGTGGTGAGAATCCACCAAAGCCACTGCCCCTCTTGGCCAGGGCCAGCGGCAACCGCTCATCTTCAGGAGAGGGGGAGGGAGGGTCTTGGCTGTAGCTTGTGGTCCCAGAAGGTGGAGCCCCCA
CircID chr2:74680000|74680168
ORF Type ORF4
Protein Length 43
Nucleotide Length 132
Protein Sequence MWAGLGQGSSRKGGENPPKPLPLLARASGNRSSSGEGEGGSWL
Nucleotide Sequence ATGTGGGCTGGGCTTGGGCAAGGATCAAGCAGGAAGGGTGGTGAGAATCCACCAAAGCCACTGCCCCTCTTGGCCAGGGCCAGCGGCAACCGCTCATCTTCAGGAGAGGGGGAGGGAGGGTCTTGGCTGTAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab