CircRNA Information

General Information
circRNA Basic Information
CircID chr2:84905674|84906068
Strand -
CircType exon
Host Gene ENSG00000034510.5;
Algorism CIRI2;
Sequence GCGAGTGGGAGCACCAGGATCTCGGGCTCGGAACGAGACTGCACGGTGAGTGCGGCGCCGGGGCGGGGGGCCCACCCAGGGTGTGGTCGGATCCGGTGCACCGGGCGGGCGCGCCGCAACCGCGACAGGCGCCCTTCTCGGACCGGACGCAGGGGCCGGCGACCACGCCCTGGGACCGAGAAGAGGGGTGCGGGACGCGCCCAGATCCTCGGCCTTGGGGCTGCTCGGCACGCCTTGGCGCGAGTGCCACGTCGAGAGGCGTCGGCGGGGAGCGCGGAAGGGGACGCTGGCCCCCAGGCCCAGGTCAAGCGCCTTGGTTTGCCCACTAGGATTGTTTTAAGAAAATGGCAGACAAACCAGACATGGGGGAAATCGCCAGCTTCGATAAGGCCAAG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr2:84905674|84906068 hsa-miR-192-5p 0 0 1
chr2:84905674|84906068 hsa-miR-192-3p 0 0 1
chr2:84905674|84906068 hsa-miR-215-5p 0 0 1
chr2:84905674|84906068 hsa-miR-215-3p 0 0 1
chr2:84905674|84906068 hsa-miR-346 0 0 1
chr2:84905674|84906068 hsa-miR-612 1 0 1
chr2:84905674|84906068 hsa-miR-631 0 0 1
chr2:84905674|84906068 hsa-miR-632 1 0 1
chr2:84905674|84906068 hsa-miR-637 1 1 1
chr2:84905674|84906068 hsa-miR-661 1 1 1
chr2:84905674|84906068 hsa-miR-541-5p 0 0 1
chr2:84905674|84906068 hsa-miR-541-3p 0 0 1
chr2:84905674|84906068 hsa-miR-937-5p 0 0 1
chr2:84905674|84906068 hsa-miR-937-3p 0 0 1
chr2:84905674|84906068 hsa-miR-942-5p 0 0 1
chr2:84905674|84906068 hsa-miR-942-3p 0 0 1
chr2:84905674|84906068 hsa-miR-1231 0 0 1
chr2:84905674|84906068 hsa-miR-1293 0 0 1
chr2:84905674|84906068 hsa-miR-296-5p 0 1 1
chr2:84905674|84906068 hsa-miR-127-3p 0 1 1
chr2:84905674|84906068 hsa-miR-615-3p 1 1 1
chr2:84905674|84906068 hsa-miR-532-3p 0 0 1
chr2:84905674|84906068 hsa-miR-654-5p 0 0 1
chr2:84905674|84906068 hsa-miR-566 0 0 1
chr2:84905674|84906068 hsa-miR-361-3p 0 0 1
chr2:84905674|84906068 hsa-miR-654-3p 0 0 1
chr2:84905674|84906068 hsa-miR-524-3p 0 1 1
chr2:84905674|84906068 hsa-miR-525-3p 0 1 1
chr2:84905674|84906068 hsa-miR-1285 0 0 1
chr2:84905674|84906068 hsa-miR-1268 0 0 1
chr2:84905674|84906068 hsa-miR-762 1 0 0
chr2:84905674|84906068 hsa-miR-1295a 0 1 0
chr2:84905674|84906068 hsa-miR-1268a 0 1 0
chr2:84905674|84906068 hsa-miR-1470 0 1 0
chr2:84905674|84906068 hsa-miR-2861 1 1 0
chr2:84905674|84906068 hsa-miR-3193 0 1 0
chr2:84905674|84906068 hsa-miR-4292 0 1 0
chr2:84905674|84906068 hsa-miR-3661 0 1 0
chr2:84905674|84906068 hsa-miR-3907 0 1 0
chr2:84905674|84906068 hsa-miR-1268b 0 1 0
chr2:84905674|84906068 hsa-miR-4449 1 1 0
chr2:84905674|84906068 hsa-miR-4454 0 1 0
chr2:84905674|84906068 hsa-miR-4682 1 0 0
chr2:84905674|84906068 hsa-miR-4683 1 0 0
chr2:84905674|84906068 hsa-miR-6075 1 0 0
chr2:84905674|84906068 hsa-miR-9899 1 1 0
chr2:84905674|84906068 hsa-miR-214-5p 0 1 0
chr2:84905674|84906068 hsa-miR-6881-3p 0 1 0
chr2:84905674|84906068 hsa-miR-877-3p 0 1 0
chr2:84905674|84906068 hsa-miR-4436b-5p 1 0 0
chr2:84905674|84906068 hsa-miR-1343-3p 0 1 0
chr2:84905674|84906068 hsa-miR-939-3p 1 1 0
chr2:84905674|84906068 hsa-miR-7108-3p 0 1 0
chr2:84905674|84906068 hsa-miR-1247-5p 0 1 0
chr2:84905674|84906068 hsa-miR-4783-3p 1 0 0
chr2:84905674|84906068 hsa-miR-7113-3p 1 1 0
chr2:84905674|84906068 hsa-miR-4783-5p 0 1 0
chr2:84905674|84906068 hsa-miR-6742-3p 0 1 0
chr2:84905674|84906068 hsa-miR-6781-5p 1 0 0
chr2:84905674|84906068 hsa-miR-3922-5p 0 1 0
chr2:84905674|84906068 hsa-miR-4707-5p 1 1 0
chr2:84905674|84906068 hsa-miR-1307-3p 0 1 0
chr2:84905674|84906068 hsa-miR-4727-3p 0 1 0
chr2:84905674|84906068 hsa-miR-6814-5p 0 1 0
chr2:84905674|84906068 hsa-miR-3940-3p 1 0 0
chr2:84905674|84906068 hsa-miR-5088-3p 0 1 0
chr2:84905674|84906068 hsa-miR-4746-5p 0 1 0
chr2:84905674|84906068 hsa-miR-6846-3p 1 0 0
chr2:84905674|84906068 hsa-miR-4787-3p 1 0 0
chr2:84905674|84906068 hsa-miR-6816-5p 1 0 0
chr2:84905674|84906068 hsa-miR-3127-3p 0 1 0
chr2:84905674|84906068 hsa-miR-1915-3p 0 1 0
chr2:84905674|84906068 hsa-miR-4685-5p 0 1 0
chr2:84905674|84906068 hsa-miR-4745-3p 1 0 0
chr2:84905674|84906068 hsa-miR-10394-3p 0 1 0
chr2:84905674|84906068 hsa-miR-10396a-3p 1 1 0
chr2:84905674|84906068 hsa-miR-10396b-3p 1 1 0
chr2:84905674|84906068 hsa-miR-6724-5p 0 1 0
chr2:84905674|84906068 hsa-miR-6791-5p 0 1 0
chr2:84905674|84906068 hsa-miR-6756-3p 0 1 0
chr2:84905674|84906068 hsa-miR-6862-3p 1 0 0
chr2:84905674|84906068 hsa-miR-6810-3p 0 1 0
chr2:84905674|84906068 hsa-miR-10400-3p 0 1 0
chr2:84905674|84906068 hsa-miR-10392-3p 1 1 0
chr2:84905674|84906068 hsa-miR-11181-5p 1 0 0
chr2:84905674|84906068 hsa-miR-6764-5p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr2:84905674|84906068
ORF Type ORF1
Protein Length 53
Nucleotide Length 159
Protein Sequence MARVPRREASAGSAEGDAGPQAQVKRLGLPTRIVLRKWQTNQTWGKSPASIRP
Nucleotide Sequence TTGGCGCGAGTGCCACGTCGAGAGGCGTCGGCGGGGAGCGCGGAAGGGGACGCTGGCCCCCAGGCCCAGGTCAAGCGCCTTGGTTTGCCCACTAGGATTGTTTTAAGAAAATGGCAGACAAACCAGACATGGGGGAAATCGCCAGCTTCGATAAGGCCA
CircID chr2:84905674|84906068
ORF Type ORF2
Protein Length 56
Nucleotide Length 171
Protein Sequence MGPRRGVRDAPRSSALGLLGTPWRECHVERRRRGARKGTLAPRPRSSALVCPLGLF
Nucleotide Sequence CTGGGACCGAGAAGAGGGGTGCGGGACGCGCCCAGATCCTCGGCCTTGGGGCTGCTCGGCACGCCTTGGCGCGAGTGCCACGTCGAGAGGCGTCGGCGGGGAGCGCGGAAGGGGACGCTGGCCCCCAGGCCCAGGTCAAGCGCCTTGGTTTGCCCACTAGGATTGTTTTAA
CircID chr2:84905674|84906068
ORF Type ORF3
Protein Length 96
Nucleotide Length 291
Protein Sequence MHGECGAGAGGPPRVWSDPVHRAGAPQPRQAPFSDRTQGPATTPWDREEGCGTRPDPRPWGCSARLGASATSRGVGGERGRGRWPPGPGQAPWFAH
Nucleotide Sequence CTGCACGGTGAGTGCGGCGCCGGGGCGGGGGGCCCACCCAGGGTGTGGTCGGATCCGGTGCACCGGGCGGGCGCGCCGCAACCGCGACAGGCGCCCTTCTCGGACCGGACGCAGGGGCCGGCGACCACGCCCTGGGACCGAGAAGAGGGGTGCGGGACGCGCCCAGATCCTCGGCCTTGGGGCTGCTCGGCACGCCTTGGCGCGAGTGCCACGTCGAGAGGCGTCGGCGGGGAGCGCGGAAGGGGACGCTGGCCCCCAGGCCCAGGTCAAGCGCCTTGGTTTGCCCACTAG
CircID chr2:84905674|84906068
ORF Type ORF4
Protein Length 102
Nucleotide Length 306
Protein Sequence MTWAWGPASPSALPADASRRGTRAKACRAAPRPRIWARPAPLFSVPGRGRRPLRPVREGRLSRLRRARPVHRIRPHPGWAPRPGAALTVQSRSEPEILVLPL
Nucleotide Sequence TTGACCTGGGCCTGGGGGCCAGCGTCCCCTTCCGCGCTCCCCGCCGACGCCTCTCGACGTGGCACTCGCGCCAAGGCGTGCCGAGCAGCCCCAAGGCCGAGGATCTGGGCGCGTCCCGCACCCCTCTTCTCGGTCCCAGGGCGTGGTCGCCGGCCCCTGCGTCCGGTCCGAGAAGGGCGCCTGTCGCGGTTGCGGCGCGCCCGCCCGGTGCACCGGATCCGACCACACCCTGGGTGGGCCCCCCGCCCCGGCGCCGCACTCACCGTGCAGTCTCGTTCCGAGCCCGAGATCCTGGTGCTCCCACTC
CircID chr2:84905674|84906068
ORF Type ORF5
Protein Length 26
Nucleotide Length 78
Protein Sequence MGGPPAPAPHSPCSLVPSPRSWCSHS
Nucleotide Sequence CTGGGTGGGCCCCCCGCCCCGGCGCCGCACTCACCGTGCAGTCTCGTTCCGAGCCCGAGATCCTGGTGCTCCCACTCG
CircID chr2:84905674|84906068
ORF Type ORF6
Protein Length 101
Nucleotide Length 303
Protein Sequence MGLGASVPFRAPRRRLSTWHSRQGVPSSPKAEDLGASRTPLLGPRAWSPAPASGPRRAPVAVAARPPGAPDPTTPWVGPPPRRRTHRAVSFRARDPGAPTR
Nucleotide Sequence CTGGGCCTGGGGGCCAGCGTCCCCTTCCGCGCTCCCCGCCGACGCCTCTCGACGTGGCACTCGCGCCAAGGCGTGCCGAGCAGCCCCAAGGCCGAGGATCTGGGCGCGTCCCGCACCCCTCTTCTCGGTCCCAGGGCGTGGTCGCCGGCCCCTGCGTCCGGTCCGAGAAGGGCGCCTGTCGCGGTTGCGGCGCGCCCGCCCGGTGCACCGGATCCGACCACACCCTGGGTGGGCCCCCCGCCCCGGCGCCGCACTCACCGTGCAGTCTCGTTCCGAGCCCGAGATCCTGGTGCTCCCACTCGC
CircID chr2:84905674|84906068
ORF Type ORF1
Protein Length 36
Nucleotide Length 108
Protein Sequence LALSKLAISPMSGLSAIFLKQSVQSRSEPEILVLPL
Nucleotide Sequence TTGGCCTTATCGAAGCTGGCGATTTCCCCCATGTCTGGTTTGTCTGCCATTTTCTTAAAACAATCCGTGCAGTCTCGTTCCGAGCCCGAGATCCTGGTGCTCCCACTC
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab