CircRNA Information

General Information
circRNA Basic Information
CircID chr2:84906503|84906662
Strand -
CircType exon
Host Gene ENSG00000034510.5;
Algorism CIRI2;
Sequence ACGAGCCACAAGCTGCACTGTGAACCTGGGCACTCCGCGCCGATGCCACCGGCCTGTGGGTCTCTGAAGGGACCCCCCCCCAATCGGACTGCCAAATTCTCCGGTTTGCCCCGGGATATTATAGAAAATTATTTGTATGAATAATGAAAATAAAACACAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr2:84906503|84906662 hsa-miR-27a-5p 0 0 1
chr2:84906503|84906662 hsa-miR-27a-3p 0 0 1
chr2:84906503|84906662 hsa-miR-96-5p 0 0 1
chr2:84906503|84906662 hsa-miR-96-3p 0 0 1
chr2:84906503|84906662 hsa-miR-148a-5p 0 0 1
chr2:84906503|84906662 hsa-miR-148a-3p 0 0 1
chr2:84906503|84906662 hsa-miR-34a-5p 0 0 1
chr2:84906503|84906662 hsa-miR-34a-3p 0 0 1
chr2:84906503|84906662 hsa-miR-182-5p 0 0 1
chr2:84906503|84906662 hsa-miR-182-3p 0 0 1
chr2:84906503|84906662 hsa-miR-27b-5p 0 0 1
chr2:84906503|84906662 hsa-miR-27b-3p 0 0 1
chr2:84906503|84906662 hsa-miR-152-5p 0 0 1
chr2:84906503|84906662 hsa-miR-152-3p 0 0 1
chr2:84906503|84906662 hsa-miR-374a-5p 0 0 1
chr2:84906503|84906662 hsa-miR-374a-3p 0 0 1
chr2:84906503|84906662 hsa-miR-148b-5p 0 0 1
chr2:84906503|84906662 hsa-miR-148b-3p 0 0 1
chr2:84906503|84906662 hsa-miR-449a 0 0 1
chr2:84906503|84906662 hsa-miR-449b-5p 0 0 1
chr2:84906503|84906662 hsa-miR-449b-3p 0 0 1
chr2:84906503|84906662 hsa-miR-1271-5p 0 0 1
chr2:84906503|84906662 hsa-miR-1271-3p 0 0 1
chr2:84906503|84906662 hsa-miR-1301-5p 0 0 1
chr2:84906503|84906662 hsa-miR-1301-3p 0 0 1
chr2:84906503|84906662 hsa-miR-889-5p 0 0 1
chr2:84906503|84906662 hsa-miR-889-3p 0 0 1
chr2:84906503|84906662 hsa-miR-374b-5p 0 0 1
chr2:84906503|84906662 hsa-miR-374b-3p 0 0 1
chr2:84906503|84906662 hsa-miR-1275 0 0 1
chr2:84906503|84906662 hsa-miR-615-5p 0 1 1
chr2:84906503|84906662 hsa-miR-513a-5p 0 0 1
chr2:84906503|84906662 hsa-miR-485-3p 0 0 1
chr2:84906503|84906662 hsa-miR-34c-5p 0 0 1
chr2:84906503|84906662 hsa-miR-590-3p 0 0 1
chr2:84906503|84906662 hsa-miR-369-3p 0 0 1
chr2:84906503|84906662 hsa-miR-128 0 0 1
chr2:84906503|84906662 hsa-miR-664 0 0 1
chr2:84906503|84906662 hsa-miR-1469 1 1 0
chr2:84906503|84906662 hsa-miR-3135a 0 1 0
chr2:84906503|84906662 hsa-miR-4281 1 0 0
chr2:84906503|84906662 hsa-miR-4449 1 0 0
chr2:84906503|84906662 hsa-miR-4479 1 0 0
chr2:84906503|84906662 hsa-miR-4519 1 0 0
chr2:84906503|84906662 hsa-miR-4634 1 0 0
chr2:84906503|84906662 hsa-miR-4642 0 1 0
chr2:84906503|84906662 hsa-miR-5090 0 1 0
chr2:84906503|84906662 hsa-miR-139-5p 1 0 0
chr2:84906503|84906662 hsa-miR-4726-3p 0 1 0
chr2:84906503|84906662 hsa-miR-6089 1 0 0
chr2:84906503|84906662 hsa-miR-4655-5p 1 0 0
chr2:84906503|84906662 hsa-miR-3934-3p 0 1 0
chr2:84906503|84906662 hsa-miR-7109-5p 1 1 0
chr2:84906503|84906662 hsa-miR-6749-5p 1 0 0
chr2:84906503|84906662 hsa-miR-4743-5p 1 0 0
chr2:84906503|84906662 hsa-miR-6781-5p 1 0 0
chr2:84906503|84906662 hsa-miR-1180-5p 0 1 0
chr2:84906503|84906662 hsa-miR-6769b-5p 1 0 0
chr2:84906503|84906662 hsa-miR-6893-5p 1 0 0
chr2:84906503|84906662 hsa-miR-6775-5p 1 1 0
chr2:84906503|84906662 hsa-miR-6803-5p 1 0 0
chr2:84906503|84906662 hsa-miR-4755-5p 0 1 0
chr2:84906503|84906662 hsa-miR-328-5p 1 0 0
chr2:84906503|84906662 hsa-miR-675-5p 1 0 0
chr2:84906503|84906662 hsa-miR-10396b-3p 1 0 0
chr2:84906503|84906662 hsa-miR-10398-3p 1 0 0
chr2:84906503|84906662 hsa-miR-3679-5p 1 0 0
chr2:84906503|84906662 hsa-miR-6791-5p 1 0 0
chr2:84906503|84906662 hsa-miR-33b-3p 1 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr2:84906503|84906662
ORF Type ORF1
Protein Length 43
Nucleotide Length 132
Protein Sequence MHCEPGHSAPMPPACGSLKGPPPNRTAKFSGLPRDIIENYLYE
Nucleotide Sequence CTGCACTGTGAACCTGGGCACTCCGCGCCGATGCCACCGGCCTGTGGGTCTCTGAAGGGACCCCCCCCCAATCGGACTGCCAAATTCTCCGGTTTGCCCCGGGATATTATAGAAAATTATTTGTATGAATAA
CircID chr2:84906503|84906662
ORF Type ORF2
Protein Length 28
Nucleotide Length 87
Protein Sequence MWVSEGTPPQSDCQILRFAPGYYRKLFV
Nucleotide Sequence CTGTGGGTCTCTGAAGGGACCCCCCCCCAATCGGACTGCCAAATTCTCCGGTTTGCCCCGGGATATTATAGAAAATTATTTGTATGA
CircID chr2:84906503|84906662
ORF Type ORF3
Protein Length 31
Nucleotide Length 93
Protein Sequence MAVRLGGGPFRDPQAGGIGAECPGSQCSLWL
Nucleotide Sequence TTGGCAGTCCGATTGGGGGGGGGTCCCTTCAGAGACCCACAGGCCGGTGGCATCGGCGCGGAGTGCCCAGGTTCACAGTGCAGCTTGTGGCTC
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab