CircRNA Information

General Information
circRNA Basic Information
CircID chr2:85401258|85401588
Strand -
CircType exon
Host Gene ENSG00000042493.14;
Algorism CIRI2;
Sequence CTGGTAGAGTTTCTTGATGGCAGCTGGGGCTCCTGTGGAGGTCTTGTGAAATGCTGACTCCACACCACCTTCCTGCAGCCCAGACGGCCCATCTGAGTGGACTGACAGGAGACCCAGAGCCCTCTGCACCCCATCCCACTGGAAGACGGGCAGAAAGGTGGGGACCCGGCTCCAAAGGCACCCGGGTCTTCTGCAGGGTGAGAACCAGCCAGAAGCAGGGCTGGCTCTGAGGGAAGCTGCAGGGTGGGGGTGCCTAGAGGTGGGCTCTGACCTGGTACTTGAGGCCCCGTGGGAAGTAGCTCATGAAGAGGTCAGACTCATTGCCCTGCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr2:85401258|85401588 hsa-miR-22-5p 0 0 1
chr2:85401258|85401588 hsa-miR-22-3p 0 0 1
chr2:85401258|85401588 hsa-miR-26b-5p 0 0 1
chr2:85401258|85401588 hsa-miR-26b-3p 0 0 1
chr2:85401258|85401588 hsa-miR-223-5p 0 0 1
chr2:85401258|85401588 hsa-miR-223-3p 0 0 1
chr2:85401258|85401588 hsa-miR-149-5p 0 0 1
chr2:85401258|85401588 hsa-miR-149-3p 0 0 1
chr2:85401258|85401588 hsa-miR-326 0 0 1
chr2:85401258|85401588 hsa-miR-433-5p 0 0 1
chr2:85401258|85401588 hsa-miR-433-3p 0 0 1
chr2:85401258|85401588 hsa-miR-608 1 0 1
chr2:85401258|85401588 hsa-miR-610 0 0 1
chr2:85401258|85401588 hsa-miR-612 0 0 1
chr2:85401258|85401588 hsa-miR-618 0 0 1
chr2:85401258|85401588 hsa-miR-627-5p 0 0 1
chr2:85401258|85401588 hsa-miR-627-3p 0 0 1
chr2:85401258|85401588 hsa-miR-645 0 0 1
chr2:85401258|85401588 hsa-miR-662 0 0 1
chr2:85401258|85401588 hsa-miR-1301-5p 0 0 1
chr2:85401258|85401588 hsa-miR-1301-3p 0 0 1
chr2:85401258|85401588 hsa-miR-298 0 0 1
chr2:85401258|85401588 hsa-miR-760 1 0 1
chr2:85401258|85401588 hsa-miR-924 0 0 1
chr2:85401258|85401588 hsa-miR-1229-5p 0 0 1
chr2:85401258|85401588 hsa-miR-1229-3p 0 0 1
chr2:85401258|85401588 hsa-miR-1205 0 0 1
chr2:85401258|85401588 hsa-miR-1286 0 0 1
chr2:85401258|85401588 hsa-miR-1297 0 0 1
chr2:85401258|85401588 hsa-miR-513b-5p 0 0 1
chr2:85401258|85401588 hsa-miR-513b-3p 0 0 1
chr2:85401258|85401588 hsa-miR-1825 0 0 1
chr2:85401258|85401588 hsa-miR-1225-3p 0 0 1
chr2:85401258|85401588 hsa-miR-145-5p 0 0 1
chr2:85401258|85401588 hsa-miR-193a-5p 0 0 1
chr2:85401258|85401588 hsa-miR-199a-5p 0 0 1
chr2:85401258|85401588 hsa-miR-1184 0 0 1
chr2:85401258|85401588 hsa-miR-1289 0 0 1
chr2:85401258|85401588 hsa-miR-1224-3p 0 0 1
chr2:85401258|85401588 hsa-miR-188-3p 0 0 1
chr2:85401258|85401588 hsa-miR-556-5p 0 0 1
chr2:85401258|85401588 hsa-miR-199b-5p 0 0 1
chr2:85401258|85401588 hsa-miR-324-3p 0 0 1
chr2:85401258|85401588 hsa-miR-342-5p 0 0 1
chr2:85401258|85401588 hsa-miR-330-5p 0 0 1
chr2:85401258|85401588 hsa-miR-455-3p 0 0 1
chr2:85401258|85401588 hsa-miR-1260 0 0 1
chr2:85401258|85401588 hsa-miR-642 0 0 1
chr2:85401258|85401588 hsa-miR-26a 0 0 1
chr2:85401258|85401588 hsa-miR-1285 0 0 1
chr2:85401258|85401588 hsa-miR-544 0 0 1
chr2:85401258|85401588 hsa-miR-768-5p 0 0 1
chr2:85401258|85401588 hsa-miR-107 0 1 0
chr2:85401258|85401588 hsa-miR-637 1 0 0
chr2:85401258|85401588 hsa-miR-658 1 0 0
chr2:85401258|85401588 hsa-miR-1183 1 0 0
chr2:85401258|85401588 hsa-miR-1260a 0 1 0
chr2:85401258|85401588 hsa-miR-1538 1 0 0
chr2:85401258|85401588 hsa-miR-4323 0 1 0
chr2:85401258|85401588 hsa-miR-378g 1 0 0
chr2:85401258|85401588 hsa-miR-4465 0 1 0
chr2:85401258|85401588 hsa-miR-4476 0 1 0
chr2:85401258|85401588 hsa-miR-2392 1 0 0
chr2:85401258|85401588 hsa-miR-1587 1 0 0
chr2:85401258|85401588 hsa-miR-4651 1 0 0
chr2:85401258|85401588 hsa-miR-4656 1 0 0
chr2:85401258|85401588 hsa-miR-4721 1 0 0
chr2:85401258|85401588 hsa-miR-4739 1 0 0
chr2:85401258|85401588 hsa-miR-4741 1 0 0
chr2:85401258|85401588 hsa-miR-5572 1 0 0
chr2:85401258|85401588 hsa-miR-5787 1 0 0
chr2:85401258|85401588 hsa-miR-12116 1 0 0
chr2:85401258|85401588 hsa-miR-12125 0 1 0
chr2:85401258|85401588 hsa-miR-504-3p 1 0 0
chr2:85401258|85401588 hsa-miR-3194-3p 0 1 0
chr2:85401258|85401588 hsa-miR-6825-5p 0 1 0
chr2:85401258|85401588 hsa-miR-6728-5p 1 0 0
chr2:85401258|85401588 hsa-miR-4722-5p 0 1 0
chr2:85401258|85401588 hsa-miR-593-5p 1 0 0
chr2:85401258|85401588 hsa-miR-6890-5p 0 1 0
chr2:85401258|85401588 hsa-miR-6741-5p 0 1 0
chr2:85401258|85401588 hsa-miR-6842-3p 1 0 0
chr2:85401258|85401588 hsa-miR-6742-5p 1 0 0
chr2:85401258|85401588 hsa-miR-6793-5p 1 0 0
chr2:85401258|85401588 hsa-miR-6796-5p 1 0 0
chr2:85401258|85401588 hsa-miR-4725-5p 1 0 0
chr2:85401258|85401588 hsa-miR-6829-5p 1 0 0
chr2:85401258|85401588 hsa-miR-6798-5p 1 0 0
chr2:85401258|85401588 hsa-miR-6782-5p 1 0 0
chr2:85401258|85401588 hsa-miR-6858-3p 1 0 0
chr2:85401258|85401588 hsa-miR-6786-5p 1 0 0
chr2:85401258|85401588 hsa-miR-5088-5p 1 0 0
chr2:85401258|85401588 hsa-miR-6740-5p 0 1 0
chr2:85401258|85401588 hsa-miR-103a-3p 0 1 0
chr2:85401258|85401588 hsa-miR-30a-3p 0 1 0
chr2:85401258|85401588 hsa-miR-6877-5p 1 0 0
chr2:85401258|85401588 hsa-miR-597-3p 0 1 0
chr2:85401258|85401588 hsa-miR-6801-5p 0 1 0
chr2:85401258|85401588 hsa-miR-6738-3p 0 1 0
chr2:85401258|85401588 hsa-miR-3675-3p 0 1 0
chr2:85401258|85401588 hsa-miR-7152-5p 0 1 0
chr2:85401258|85401588 hsa-miR-3620-3p 1 0 0
chr2:85401258|85401588 hsa-miR-3173-5p 0 1 0
chr2:85401258|85401588 hsa-miR-6515-3p 0 1 0
chr2:85401258|85401588 hsa-miR-6838-3p 0 1 0
chr2:85401258|85401588 hsa-miR-4727-5p 1 0 0
chr2:85401258|85401588 hsa-miR-6839-3p 0 1 0
chr2:85401258|85401588 hsa-miR-4763-3p 1 0 0
chr2:85401258|85401588 hsa-miR-6812-5p 0 1 0
chr2:85401258|85401588 hsa-miR-6816-5p 1 0 0
chr2:85401258|85401588 hsa-miR-6737-5p 1 0 0
chr2:85401258|85401588 hsa-miR-6752-5p 1 0 0
chr2:85401258|85401588 hsa-miR-6754-5p 1 0 0
chr2:85401258|85401588 hsa-miR-6756-5p 1 0 0
chr2:85401258|85401588 hsa-miR-6813-5p 1 0 0
chr2:85401258|85401588 hsa-miR-6819-5p 1 0 0
chr2:85401258|85401588 hsa-miR-6722-3p 1 0 0
chr2:85401258|85401588 hsa-miR-4755-5p 0 1 0
chr2:85401258|85401588 hsa-miR-3620-5p 1 0 0
chr2:85401258|85401588 hsa-miR-5196-5p 1 0 0
chr2:85401258|85401588 hsa-miR-6836-5p 0 1 0
chr2:85401258|85401588 hsa-miR-328-5p 1 0 0
chr2:85401258|85401588 hsa-miR-4745-5p 1 0 0
chr2:85401258|85401588 hsa-miR-675-5p 1 0 0
chr2:85401258|85401588 hsa-miR-6848-5p 1 0 0
chr2:85401258|85401588 hsa-miR-939-5p 0 1 0
chr2:85401258|85401588 hsa-miR-4758-5p 1 0 0
chr2:85401258|85401588 hsa-miR-4769-5p 0 1 0
chr2:85401258|85401588 hsa-miR-3940-5p 1 0 0
chr2:85401258|85401588 hsa-miR-6799-3p 1 0 0
chr2:85401258|85401588 hsa-miR-6724-5p 1 0 0
chr2:85401258|85401588 hsa-miR-6792-3p 0 1 0
chr2:85401258|85401588 hsa-miR-6817-5p 0 1 0
chr2:85401258|85401588 hsa-miR-26a-5p 0 1 0
chr2:85401258|85401588 hsa-miR-7157-5p 0 1 0
chr2:85401258|85401588 hsa-miR-10393-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr2:85401258|85401588
ORF Type ORF1
Protein Length 25
Nucleotide Length 78
Protein Sequence MHPIPLEDGQKGGDPAPKAPGSSAG
Nucleotide Sequence CTGCACCCCATCCCACTGGAAGACGGGCAGAAAGGTGGGGACCCGGCTCCAAAGGCACCCGGGTCTTCTGCAGGGTGA

CircID chr2:85401258|85401588
ORF Type ORF2
Protein Length 47
Nucleotide Length 141
Protein Sequence MQGENQPEAGLALREAAGWGCLEVGSDLVLEAPWEVAHEEVRLIALH
Nucleotide Sequence CTGCAGGGTGAGAACCAGCCAGAAGCAGGGCTGGCTCTGAGGGAAGCTGCAGGGTGGGGGTGCCTAGAGGTGGGCTCTGACCTGGTACTTGAGGCCCCGTGGGAAGTAGCTCATGAAGAGGTCAGACTCATTGCCCTGCAC

CircID chr2:85401258|85401588
ORF Type ORF3
Protein Length 68
Nucleotide Length 207
Protein Sequence MGLLWRSCEMLTPHHLPAAQTAHLSGLTGDPEPSAPHPTGRRAERWGPGSKGTRVFCRVRTSQKQGWL
Nucleotide Sequence CTGGGGCTCCTGTGGAGGTCTTGTGAAATGCTGACTCCACACCACCTTCCTGCAGCCCAGACGGCCCATCTGAGTGGACTGACAGGAGACCCAGAGCCCTCTGCACCCCATCCCACTGGAAGACGGGCAGAAAGGTGGGGACCCGGCTCCAAAGGCACCCGGGTCTTCTGCAGGGTGAGAACCAGCCAGAAGCAGGGCTGGCTCTGA

CircID chr2:85401258|85401588
ORF Type ORF4
Protein Length 69
Nucleotide Length 207
Protein Sequence MVLTLQKTRVPLEPGPHLSARLPVGWGAEGSGSPVSPLRWAVWAAGRWCGVSISQDLHRSPSCHQETLP
Nucleotide Sequence CTGGTTCTCACCCTGCAGAAGACCCGGGTGCCTTTGGAGCCGGGTCCCCACCTTTCTGCCCGTCTTCCAGTGGGATGGGGTGCAGAGGGCTCTGGGTCTCCTGTCAGTCCACTCAGATGGGCCGTCTGGGCTGCAGGAAGGTGGTGTGGAGTCAGCATTTCACAAGACCTCCACAGGAGCCCCAGCTGCCATCAAGAAACTCTACCA

CircID chr2:85401258|85401588
ORF Type ORF5
Protein Length 51
Nucleotide Length 153
Protein Sequence MPVFQWDGVQRALGLLSVHSDGPSGLQEGGVESAFHKTSTGAPAAIKKLYQ
Nucleotide Sequence CTGCCCGTCTTCCAGTGGGATGGGGTGCAGAGGGCTCTGGGTCTCCTGTCAGTCCACTCAGATGGGCCGTCTGGGCTGCAGGAAGGTGGTGTGGAGTCAGCATTTCACAAGACCTCCACAGGAGCCCCAGCTGCCATCAAGAAACTCTACCAG

CircID chr2:85401258|85401588
ORF Type ORF6
Protein Length 80
Nucleotide Length 240
Protein Sequence MQLPSEPALLLAGSHPAEDPGAFGAGSPPFCPSSSGMGCRGLWVSCQSTQMGRLGCRKVVWSQHFTRPPQEPQLPSRNST
Nucleotide Sequence CTGCAGCTTCCCTCAGAGCCAGCCCTGCTTCTGGCTGGTTCTCACCCTGCAGAAGACCCGGGTGCCTTTGGAGCCGGGTCCCCACCTTTCTGCCCGTCTTCCAGTGGGATGGGGTGCAGAGGGCTCTGGGTCTCCTGTCAGTCCACTCAGATGGGCCGTCTGGGCTGCAGGAAGGTGGTGTGGAGTCAGCATTTCACAAGACCTCCACAGGAGCCCCAGCTGCCATCAAGAAACTCTACC

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites