CircRNA Information

General Information
circRNA Basic Information
CircID chr2:85659494|85661515
Strand +
CircType exon
Host Gene ENSG00000168878.15;
Algorism CIRI2;
Sequence CATGTCCAGCCCTCTCCAGTGTATCCACAGCCCCGACCTTTGATGAGAACTCAGCTGTCCAGCTGCAAAGGAAAAGCCAAGTGAGACGGGCTCTGGGACCATGGTGACCAGGCTCTTCCCCTGCTCCCTGGCCCTCGCCAGCTGCCAGGCTGAAAAGAAGCCTCAGCTCCCACACCGCCCTCCTCACCGCCCTTCCTCGGCAGTCACTTCCACTGGTGGACCACGGGCCCCCAGCCCTGTGTCGGCCTTGT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr2:85659494|85661515 hsa-miR-134-5p 0 0 1
chr2:85659494|85661515 hsa-miR-134-3p 0 0 1
chr2:85659494|85661515 hsa-miR-185-5p 0 0 1
chr2:85659494|85661515 hsa-miR-185-3p 0 0 1
chr2:85659494|85661515 hsa-miR-637 0 1 1
chr2:85659494|85661515 hsa-miR-1301-5p 0 0 1
chr2:85659494|85661515 hsa-miR-1301-3p 0 0 1
chr2:85659494|85661515 hsa-miR-920 0 1 1
chr2:85659494|85661515 hsa-miR-885-3p 0 0 1
chr2:85659494|85661515 hsa-miR-485-5p 0 0 1
chr2:85659494|85661515 hsa-miR-1207-3p 0 0 1
chr2:85659494|85661515 hsa-miR-220c 0 0 1
chr2:85659494|85661515 hsa-miR-663a 1 0 0
chr2:85659494|85661515 hsa-miR-762 1 1 0
chr2:85659494|85661515 hsa-miR-1293 1 0 0
chr2:85659494|85661515 hsa-miR-2861 1 0 0
chr2:85659494|85661515 hsa-miR-3131 1 0 0
chr2:85659494|85661515 hsa-miR-3141 1 1 0
chr2:85659494|85661515 hsa-miR-3154 1 0 0
chr2:85659494|85661515 hsa-miR-3185 1 0 0
chr2:85659494|85661515 hsa-miR-3196 1 0 0
chr2:85659494|85661515 hsa-miR-4300 0 1 0
chr2:85659494|85661515 hsa-miR-4257 1 0 0
chr2:85659494|85661515 hsa-miR-4270 1 1 0
chr2:85659494|85661515 hsa-miR-4271 1 0 0
chr2:85659494|85661515 hsa-miR-3911 1 1 0
chr2:85659494|85661515 hsa-miR-4466 1 0 0
chr2:85659494|85661515 hsa-miR-4488 1 0 0
chr2:85659494|85661515 hsa-miR-4492 0 1 0
chr2:85659494|85661515 hsa-miR-4498 0 1 0
chr2:85659494|85661515 hsa-miR-2392 1 0 0
chr2:85659494|85661515 hsa-miR-4508 0 1 0
chr2:85659494|85661515 hsa-miR-3960 1 0 0
chr2:85659494|85661515 hsa-miR-4651 1 0 0
chr2:85659494|85661515 hsa-miR-4675 0 1 0
chr2:85659494|85661515 hsa-miR-4688 1 0 0
chr2:85659494|85661515 hsa-miR-4689 1 1 0
chr2:85659494|85661515 hsa-miR-4706 1 0 0
chr2:85659494|85661515 hsa-miR-4710 1 1 0
chr2:85659494|85661515 hsa-miR-4721 1 0 0
chr2:85659494|85661515 hsa-miR-4739 1 1 0
chr2:85659494|85661515 hsa-miR-4741 1 0 0
chr2:85659494|85661515 hsa-miR-5047 0 1 0
chr2:85659494|85661515 hsa-miR-5090 1 0 0
chr2:85659494|85661515 hsa-miR-5698 1 0 0
chr2:85659494|85661515 hsa-miR-5787 1 1 0
chr2:85659494|85661515 hsa-miR-6069 1 0 0
chr2:85659494|85661515 hsa-miR-6077 0 1 0
chr2:85659494|85661515 hsa-miR-6081 1 0 0
chr2:85659494|85661515 hsa-miR-6085 1 0 0
chr2:85659494|85661515 hsa-miR-6090 1 0 0
chr2:85659494|85661515 hsa-miR-6127 1 0 0
chr2:85659494|85661515 hsa-miR-6133 1 0 0
chr2:85659494|85661515 hsa-miR-7150 1 0 0
chr2:85659494|85661515 hsa-miR-7974 0 1 0
chr2:85659494|85661515 hsa-miR-8072 1 0 0
chr2:85659494|85661515 hsa-miR-8073 0 1 0
chr2:85659494|85661515 hsa-miR-12115 1 0 0
chr2:85659494|85661515 hsa-miR-103a-2-5p 0 1 0
chr2:85659494|85661515 hsa-miR-4433b-3p 1 0 0
chr2:85659494|85661515 hsa-miR-214-5p 0 1 0
chr2:85659494|85661515 hsa-miR-4731-5p 1 1 0
chr2:85659494|85661515 hsa-miR-6765-5p 1 0 0
chr2:85659494|85661515 hsa-miR-7106-5p 1 0 0
chr2:85659494|85661515 hsa-miR-6825-5p 1 0 0
chr2:85659494|85661515 hsa-miR-6894-5p 1 0 0
chr2:85659494|85661515 hsa-miR-25-5p 1 0 0
chr2:85659494|85661515 hsa-miR-6799-5p 1 0 0
chr2:85659494|85661515 hsa-miR-6510-5p 1 1 0
chr2:85659494|85661515 hsa-miR-6833-5p 1 0 0
chr2:85659494|85661515 hsa-miR-6089 1 1 0
chr2:85659494|85661515 hsa-miR-7847-3p 1 0 0
chr2:85659494|85661515 hsa-miR-4695-5p 1 0 0
chr2:85659494|85661515 hsa-miR-7160-5p 1 0 0
chr2:85659494|85661515 hsa-miR-6727-5p 1 0 0
chr2:85659494|85661515 hsa-miR-4655-5p 1 0 0
chr2:85659494|85661515 hsa-miR-6783-5p 0 1 0
chr2:85659494|85661515 hsa-miR-6742-5p 1 0 0
chr2:85659494|85661515 hsa-miR-6716-5p 1 0 0
chr2:85659494|85661515 hsa-miR-6768-5p 0 1 0
chr2:85659494|85661515 hsa-miR-3180-3p 1 0 0
chr2:85659494|85661515 hsa-miR-6793-5p 1 0 0
chr2:85659494|85661515 hsa-miR-6796-5p 1 0 0
chr2:85659494|85661515 hsa-miR-6829-5p 1 0 0
chr2:85659494|85661515 hsa-miR-3190-3p 1 1 0
chr2:85659494|85661515 hsa-miR-6805-5p 1 0 0
chr2:85659494|85661515 hsa-miR-6798-5p 1 1 0
chr2:85659494|85661515 hsa-miR-6760-5p 1 0 0
chr2:85659494|85661515 hsa-miR-4793-3p 1 0 0
chr2:85659494|85661515 hsa-miR-5006-5p 1 0 0
chr2:85659494|85661515 hsa-miR-6786-5p 1 0 0
chr2:85659494|85661515 hsa-miR-1226-5p 1 0 0
chr2:85659494|85661515 hsa-miR-1229-5p 1 0 0
chr2:85659494|85661515 hsa-miR-6784-5p 1 0 0
chr2:85659494|85661515 hsa-miR-4640-5p 1 1 0
chr2:85659494|85661515 hsa-miR-1908-5p 1 0 0
chr2:85659494|85661515 hsa-miR-6771-5p 1 0 0
chr2:85659494|85661515 hsa-miR-767-5p 0 1 0
chr2:85659494|85661515 hsa-miR-92b-5p 1 0 0
chr2:85659494|85661515 hsa-miR-3202 0 1 0
chr2:85659494|85661515 hsa-miR-4446-3p 0 1 0
chr2:85659494|85661515 hsa-miR-149-3p 1 0 0
chr2:85659494|85661515 hsa-miR-6824-5p 1 0 0
chr2:85659494|85661515 hsa-miR-6789-5p 1 0 0
chr2:85659494|85661515 hsa-miR-3162-5p 1 0 0
chr2:85659494|85661515 hsa-miR-6800-5p 1 0 0
chr2:85659494|85661515 hsa-miR-6781-5p 1 0 0
chr2:85659494|85661515 hsa-miR-6895-5p 0 1 0
chr2:85659494|85661515 hsa-miR-423-5p 1 0 0
chr2:85659494|85661515 hsa-miR-598-5p 1 0 0
chr2:85659494|85661515 hsa-miR-7113-5p 0 1 0
chr2:85659494|85661515 hsa-miR-5197-3p 0 1 0
chr2:85659494|85661515 hsa-miR-5007-5p 0 1 0
chr2:85659494|85661515 hsa-miR-1207-5p 1 0 0
chr2:85659494|85661515 hsa-miR-1233-5p 1 0 0
chr2:85659494|85661515 hsa-miR-4763-3p 1 0 0
chr2:85659494|85661515 hsa-miR-6769b-5p 1 0 0
chr2:85659494|85661515 hsa-miR-6778-5p 1 1 0
chr2:85659494|85661515 hsa-miR-6787-5p 1 0 0
chr2:85659494|85661515 hsa-miR-6816-5p 1 0 0
chr2:85659494|85661515 hsa-miR-6775-5p 1 0 0
chr2:85659494|85661515 hsa-miR-5001-5p 1 1 0
chr2:85659494|85661515 hsa-miR-6726-5p 1 1 0
chr2:85659494|85661515 hsa-miR-6743-5p 1 0 0
chr2:85659494|85661515 hsa-miR-6752-5p 1 0 0
chr2:85659494|85661515 hsa-miR-6754-5p 1 1 0
chr2:85659494|85661515 hsa-miR-6756-5p 1 0 0
chr2:85659494|85661515 hsa-miR-6803-5p 1 0 0
chr2:85659494|85661515 hsa-miR-6819-5p 1 0 0
chr2:85659494|85661515 hsa-miR-7110-5p 1 0 0
chr2:85659494|85661515 hsa-miR-10401-5p 1 0 0
chr2:85659494|85661515 hsa-miR-1249-5p 1 0 0
chr2:85659494|85661515 hsa-miR-6722-3p 1 1 0
chr2:85659494|85661515 hsa-miR-6763-5p 1 0 0
chr2:85659494|85661515 hsa-miR-6779-5p 1 0 0
chr2:85659494|85661515 hsa-miR-6797-5p 1 0 0
chr2:85659494|85661515 hsa-miR-6808-5p 1 0 0
chr2:85659494|85661515 hsa-miR-6879-5p 1 0 0
chr2:85659494|85661515 hsa-miR-4728-5p 1 0 0
chr2:85659494|85661515 hsa-miR-5196-5p 1 0 0
chr2:85659494|85661515 hsa-miR-6780b-5p 1 1 0
chr2:85659494|85661515 hsa-miR-10396b-5p 1 0 0
chr2:85659494|85661515 hsa-miR-1237-5p 1 0 0
chr2:85659494|85661515 hsa-miR-1909-3p 1 1 0
chr2:85659494|85661515 hsa-miR-328-5p 1 0 0
chr2:85659494|85661515 hsa-miR-4649-5p 1 0 0
chr2:85659494|85661515 hsa-miR-4685-5p 1 0 0
chr2:85659494|85661515 hsa-miR-4725-3p 1 1 0
chr2:85659494|85661515 hsa-miR-4726-5p 1 1 0
chr2:85659494|85661515 hsa-miR-6729-5p 1 0 0
chr2:85659494|85661515 hsa-miR-6738-5p 1 0 0
chr2:85659494|85661515 hsa-miR-6846-5p 1 0 0
chr2:85659494|85661515 hsa-miR-6848-5p 1 1 0
chr2:85659494|85661515 hsa-miR-6858-5p 1 1 0
chr2:85659494|85661515 hsa-miR-6883-5p 1 0 0
chr2:85659494|85661515 hsa-miR-6889-5p 1 0 0
chr2:85659494|85661515 hsa-miR-6845-5p 1 0 0
chr2:85659494|85661515 hsa-miR-939-5p 1 1 0
chr2:85659494|85661515 hsa-miR-4758-5p 1 0 0
chr2:85659494|85661515 hsa-miR-6731-5p 1 0 0
chr2:85659494|85661515 hsa-miR-4646-5p 1 0 0
chr2:85659494|85661515 hsa-miR-6891-5p 1 0 0
chr2:85659494|85661515 hsa-miR-6785-5p 1 1 0
chr2:85659494|85661515 hsa-miR-6849-5p 1 0 0
chr2:85659494|85661515 hsa-miR-6762-5p 1 1 0
chr2:85659494|85661515 hsa-miR-6837-5p 1 0 0
chr2:85659494|85661515 hsa-miR-6827-3p 0 1 0
chr2:85659494|85661515 hsa-miR-103a-1-5p 0 1 0
chr2:85659494|85661515 hsa-miR-340-3p 0 1 0
chr2:85659494|85661515 hsa-miR-3119 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr2:85659494|85661515
ORF Type ORF1
Protein Length 50
Nucleotide Length 150
Protein Sequence MVTRLFPCSLALASCQAEKKPQLPHRPPHRPSSAVTSTGGPRAPSPVSAL
Nucleotide Sequence ATGGTGACCAGGCTCTTCCCCTGCTCCCTGGCCCTCGCCAGCTGCCAGGCTGAAAAGAAGCCTCAGCTCCCACACCGCCCTCCTCACCGCCCTTCCTCGGCAGTCACTTCCACTGGTGGACCACGGGCCCCCAGCCCTGTGTCGGCCTTG
CircID chr2:85659494|85661515
ORF Type ORF2
Protein Length 34
Nucleotide Length 102
Protein Sequence MKRSLSSHTALLTALPRQSLPLVDHGPPALCRPC
Nucleotide Sequence CTGAAAAGAAGCCTCAGCTCCCACACCGCCCTCCTCACCGCCCTTCCTCGGCAGTCACTTCCACTGGTGGACCACGGGCCCCCAGCCCTGTGTCGGCCTTGT
CircID chr2:85659494|85661515
ORF Type ORF3
Protein Length 50
Nucleotide Length 153
Protein Sequence MPRKGGEEGGVGAEASFQPGSWRGPGSRGRAWSPWSQSPSHLAFPLQLDS
Nucleotide Sequence CTGCCGAGGAAGGGCGGTGAGGAGGGCGGTGTGGGAGCTGAGGCTTCTTTTCAGCCTGGCAGCTGGCGAGGGCCAGGGAGCAGGGGAAGAGCCTGGTCACCATGGTCCCAGAGCCCGTCTCACTTGGCTTTTCCTTTGCAGCTGGACAGCTGA
CircID chr2:85659494|85661515
ORF Type ORF4
Protein Length 55
Nucleotide Length 165
Protein Sequence MRLLFSLAAGEGQGAGEEPGHHGPRARLTWLFLCSWTAEFSSKVGAVDTLERAGH
Nucleotide Sequence CTGAGGCTTCTTTTCAGCCTGGCAGCTGGCGAGGGCCAGGGAGCAGGGGAAGAGCCTGGTCACCATGGTCCCAGAGCCCGTCTCACTTGGCTTTTCCTTTGCAGCTGGACAGCTGAGTTCTCATCAAAGGTCGGGGCTGTGGATACACTGGAGAGGGCTGGACAT
CircID chr2:85659494|85661515
ORF Type ORF5
Protein Length 47
Nucleotide Length 141
Protein Sequence MARAREQGKSLVTMVPEPVSLGFSFAAGQLSSHQRSGLWIHWRGLDM
Nucleotide Sequence CTGGCGAGGGCCAGGGAGCAGGGGAAGAGCCTGGTCACCATGGTCCCAGAGCCCGTCTCACTTGGCTTTTCCTTTGCAGCTGGACAGCTGAGTTCTCATCAAAGGTCGGGGCTGTGGATACACTGGAGAGGGCTGGACATG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab