CircRNA Information

General Information
circRNA Basic Information
CircID chr2:85662202|85662417
Strand +
CircType exon
Host Gene ENSG00000168878.15;
Algorism CIRI2;
Sequence CAGATGAACGTTAAGTTTCCTTCTAGAACTGAAATGGAGGTGGAGGGAGGGGAGGGTGGTGGCTGAGATTCCACCCCTCTGCCTGAGTCCTCCGTCTCCAGTGTCGCCTGCTTTTCTGATGGAAGTCCTCCATTTCAGCTGGCTCCAGTTTGTTAAGGGTTTCAACTGCAGCCAGAGGTGTTCCGTGAGGGCTGATGGAGGAGTCGGGAGGGAGCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr2:85662202|85662417 hsa-miR-216a-5p 0 0 1
chr2:85662202|85662417 hsa-miR-216a-3p 0 0 1
chr2:85662202|85662417 hsa-miR-136-5p 0 0 1
chr2:85662202|85662417 hsa-miR-136-3p 0 0 1
chr2:85662202|85662417 hsa-miR-149-5p 0 0 1
chr2:85662202|85662417 hsa-miR-149-3p 0 0 1
chr2:85662202|85662417 hsa-miR-495-5p 0 0 1
chr2:85662202|85662417 hsa-miR-495-3p 0 0 1
chr2:85662202|85662417 hsa-miR-510-5p 0 0 1
chr2:85662202|85662417 hsa-miR-510-3p 0 0 1
chr2:85662202|85662417 hsa-miR-604 0 0 1
chr2:85662202|85662417 hsa-miR-608 0 1 1
chr2:85662202|85662417 hsa-miR-617 0 0 1
chr2:85662202|85662417 hsa-miR-647 0 1 1
chr2:85662202|85662417 hsa-miR-765 0 0 1
chr2:85662202|85662417 hsa-miR-1252-5p 0 0 1
chr2:85662202|85662417 hsa-miR-1252-3p 0 0 1
chr2:85662202|85662417 hsa-miR-518d-5p 1 1 1
chr2:85662202|85662417 hsa-miR-519b-5p 1 1 1
chr2:85662202|85662417 hsa-miR-519c-5p 1 1 1
chr2:85662202|85662417 hsa-miR-520c-5p 1 1 1
chr2:85662202|85662417 hsa-miR-220b 0 0 1
chr2:85662202|85662417 hsa-miR-1273 0 0 1
chr2:85662202|85662417 hsa-miR-526a 0 0 1
chr2:85662202|85662417 hsa-miR-203 0 0 1
chr2:85662202|85662417 hsa-miR-1202 1 1 0
chr2:85662202|85662417 hsa-miR-3135b 0 1 0
chr2:85662202|85662417 hsa-miR-4469 0 1 0
chr2:85662202|85662417 hsa-miR-4692 0 1 0
chr2:85662202|85662417 hsa-miR-4721 1 0 0
chr2:85662202|85662417 hsa-miR-4739 1 0 0
chr2:85662202|85662417 hsa-miR-5193 0 1 0
chr2:85662202|85662417 hsa-miR-5194 0 1 0
chr2:85662202|85662417 hsa-miR-8089 0 1 0
chr2:85662202|85662417 hsa-miR-1843 0 1 0
chr2:85662202|85662417 hsa-miR-197-3p 0 1 0
chr2:85662202|85662417 hsa-miR-17-3p 0 1 0
chr2:85662202|85662417 hsa-miR-671-5p 1 0 0
chr2:85662202|85662417 hsa-miR-6894-5p 1 0 0
chr2:85662202|85662417 hsa-miR-25-5p 0 1 0
chr2:85662202|85662417 hsa-miR-6807-5p 0 1 0
chr2:85662202|85662417 hsa-miR-7847-3p 1 0 0
chr2:85662202|85662417 hsa-miR-3064-5p 0 1 0
chr2:85662202|85662417 hsa-miR-505-5p 0 1 0
chr2:85662202|85662417 hsa-miR-7110-3p 0 1 0
chr2:85662202|85662417 hsa-miR-6787-3p 0 1 0
chr2:85662202|85662417 hsa-miR-6845-3p 0 1 0
chr2:85662202|85662417 hsa-miR-877-3p 0 1 0
chr2:85662202|85662417 hsa-miR-2467-3p 0 1 0
chr2:85662202|85662417 hsa-miR-6782-5p 0 1 0
chr2:85662202|85662417 hsa-miR-6884-3p 0 1 0
chr2:85662202|85662417 hsa-miR-5088-5p 0 1 0
chr2:85662202|85662417 hsa-miR-4738-3p 0 1 0
chr2:85662202|85662417 hsa-miR-4690-5p 1 1 0
chr2:85662202|85662417 hsa-miR-7111-3p 0 1 0
chr2:85662202|85662417 hsa-miR-5196-3p 0 1 0
chr2:85662202|85662417 hsa-miR-4667-3p 0 1 0
chr2:85662202|85662417 hsa-miR-4695-3p 0 1 0
chr2:85662202|85662417 hsa-miR-7106-3p 0 1 0
chr2:85662202|85662417 hsa-miR-4687-5p 0 1 0
chr2:85662202|85662417 hsa-miR-6730-3p 1 0 0
chr2:85662202|85662417 hsa-miR-6887-3p 0 1 0
chr2:85662202|85662417 hsa-miR-6746-3p 0 1 0
chr2:85662202|85662417 hsa-miR-6865-3p 0 1 0
chr2:85662202|85662417 hsa-miR-6826-3p 0 1 0
chr2:85662202|85662417 hsa-miR-1229-3p 0 1 0
chr2:85662202|85662417 hsa-miR-6734-3p 0 1 0
chr2:85662202|85662417 hsa-miR-6512-5p 1 0 0
chr2:85662202|85662417 hsa-miR-6893-5p 0 1 0
chr2:85662202|85662417 hsa-miR-6842-5p 0 1 0
chr2:85662202|85662417 hsa-miR-6808-5p 0 1 0
chr2:85662202|85662417 hsa-miR-4685-3p 0 1 0
chr2:85662202|85662417 hsa-miR-6738-5p 0 1 0
chr2:85662202|85662417 hsa-miR-6511a-5p 0 1 0
chr2:85662202|85662417 hsa-miR-6876-5p 1 0 0
chr2:85662202|85662417 hsa-miR-10398-5p 0 1 0
chr2:85662202|85662417 hsa-miR-518e-5p 1 1 0
chr2:85662202|85662417 hsa-miR-518f-5p 1 1 0
chr2:85662202|85662417 hsa-miR-519a-5p 1 1 0
chr2:85662202|85662417 hsa-miR-522-5p 1 1 0
chr2:85662202|85662417 hsa-miR-523-5p 1 1 0
chr2:85662202|85662417 hsa-miR-526a-5p 1 1 0
chr2:85662202|85662417 hsa-miR-6792-3p 0 1 0
chr2:85662202|85662417 hsa-miR-3085-3p 0 1 0
chr2:85662202|85662417 hsa-miR-6504-5p 0 1 0
chr2:85662202|85662417 hsa-miR-5195-3p 1 0 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr2:85662202|85662417
ORF Type ORF1
Protein Length 25
Nucleotide Length 78
Protein Sequence MPESSVSSVACFSDGSPPFQLAPVC
Nucleotide Sequence CTGCCTGAGTCCTCCGTCTCCAGTGTCGCCTGCTTTTCTGATGGAAGTCCTCCATTTCAGCTGGCTCCAGTTTGTTAA

CircID chr2:85662202|85662417
ORF Type ORF2
Protein Length 62
Nucleotide Length 186
Protein Sequence MKWRWREGRVVAEIPPLCLSPPSPVSPAFLMEVLHFSWLQFVKGFNCSQRCSVRADGGVGRE
Nucleotide Sequence CTGAAATGGAGGTGGAGGGAGGGGAGGGTGGTGGCTGAGATTCCACCCCTCTGCCTGAGTCCTCCGTCTCCAGTGTCGCCTGCTTTTCTGATGGAAGTCCTCCATTTCAGCTGGCTCCAGTTTGTTAAGGGTTTCAACTGCAGCCAGAGGTGTTCCGTGAGGGCTGATGGAGGAGTCGGGAGGGAG

CircID chr2:85662202|85662417
ORF Type ORF3
Protein Length 57
Nucleotide Length 171
Protein Sequence MQLKPLTNWSQLKWRTSIRKAGDTGDGGLRQRGGISATTLPSLHLHFSSRRKLNVHL
Nucleotide Sequence CTGCAGTTGAAACCCTTAACAAACTGGAGCCAGCTGAAATGGAGGACTTCCATCAGAAAAGCAGGCGACACTGGAGACGGAGGACTCAGGCAGAGGGGTGGAATCTCAGCCACCACCCTCCCCTCCCTCCACCTCCATTTCAGTTCTAGAAGGAAACTTAACGTTCATCTG

CircID chr2:85662202|85662417
ORF Type ORF4
Protein Length 33
Nucleotide Length 99
Protein Sequence METEDSGRGVESQPPPSPPSTSISVLEGNLTFI
Nucleotide Sequence CTGGAGACGGAGGACTCAGGCAGAGGGGTGGAATCTCAGCCACCACCCTCCCCTCCCTCCACCTCCATTTCAGTTCTAGAAGGAAACTTAACGTTCATC

CircID chr2:85662202|85662417
ORF Type ORF5
Protein Length 50
Nucleotide Length 153
Protein Sequence MAAVETLNKLEPAEMEDFHQKSRRHWRRRTQAEGWNLSHHPPLPPPPFQF
Nucleotide Sequence CTGGCTGCAGTTGAAACCCTTAACAAACTGGAGCCAGCTGAAATGGAGGACTTCCATCAGAAAAGCAGGCGACACTGGAGACGGAGGACTCAGGCAGAGGGGTGGAATCTCAGCCACCACCCTCCCCTCCCTCCACCTCCATTTCAGTTCTAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites