CircRNA Information

General Information
circRNA Basic Information
CircID chr2:88857219|88857375
Strand +
CircType exon
Host Gene ENSG00000211592.5;
Algorism CIRI2;
Sequence AGGGGAGAGTGTTAGAGGGAGAAGTGCCCCCACCTGCTCCTCAGTTCCAGCCTGACCCCCTCCCATCCTTTGGCCTCTGACCCTTTTTCCACAGGGGACCTACCCCTATTGCGGTCCTCCAGCTCATCTTTCACCTCACCCCCCTCCTCCTCCTTGG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr2:88857219|88857375 hsa-miR-141-5p 0 0 1
chr2:88857219|88857375 hsa-miR-141-3p 0 0 1
chr2:88857219|88857375 hsa-miR-200a-5p 0 0 1
chr2:88857219|88857375 hsa-miR-200a-3p 0 0 1
chr2:88857219|88857375 hsa-miR-484 0 0 1
chr2:88857219|88857375 hsa-miR-558 0 0 1
chr2:88857219|88857375 hsa-miR-765 1 1 1
chr2:88857219|88857375 hsa-miR-1294 0 0 1
chr2:88857219|88857375 hsa-miR-331-3p 0 0 1
chr2:88857219|88857375 hsa-miR-556-5p 0 1 1
chr2:88857219|88857375 hsa-miR-642 0 0 1
chr2:88857219|88857375 hsa-miR-608 1 0 0
chr2:88857219|88857375 hsa-miR-611 1 0 0
chr2:88857219|88857375 hsa-miR-623 1 0 0
chr2:88857219|88857375 hsa-miR-658 1 0 0
chr2:88857219|88857375 hsa-miR-762 1 0 0
chr2:88857219|88857375 hsa-miR-920 1 0 0
chr2:88857219|88857375 hsa-miR-1182 1 0 0
chr2:88857219|88857375 hsa-miR-1275 1 0 0
chr2:88857219|88857375 hsa-miR-1321 1 0 0
chr2:88857219|88857375 hsa-miR-3141 1 0 0
chr2:88857219|88857375 hsa-miR-3154 1 0 0
chr2:88857219|88857375 hsa-miR-3197 1 0 0
chr2:88857219|88857375 hsa-miR-4257 1 0 0
chr2:88857219|88857375 hsa-miR-4270 1 0 0
chr2:88857219|88857375 hsa-miR-4271 1 0 0
chr2:88857219|88857375 hsa-miR-4281 1 0 0
chr2:88857219|88857375 hsa-miR-3652 1 1 0
chr2:88857219|88857375 hsa-miR-3665 0 1 0
chr2:88857219|88857375 hsa-miR-3917 1 0 0
chr2:88857219|88857375 hsa-miR-4430 1 1 0
chr2:88857219|88857375 hsa-miR-4447 0 1 0
chr2:88857219|88857375 hsa-miR-3135b 1 1 0
chr2:88857219|88857375 hsa-miR-4469 0 1 0
chr2:88857219|88857375 hsa-miR-4478 1 0 0
chr2:88857219|88857375 hsa-miR-4488 1 0 0
chr2:88857219|88857375 hsa-miR-4498 1 0 0
chr2:88857219|88857375 hsa-miR-4505 1 0 0
chr2:88857219|88857375 hsa-miR-2392 1 1 0
chr2:88857219|88857375 hsa-miR-4514 1 0 0
chr2:88857219|88857375 hsa-miR-4516 1 0 0
chr2:88857219|88857375 hsa-miR-4525 1 0 0
chr2:88857219|88857375 hsa-miR-4533 1 0 0
chr2:88857219|88857375 hsa-miR-4534 1 0 0
chr2:88857219|88857375 hsa-miR-1587 1 0 0
chr2:88857219|88857375 hsa-miR-4651 1 0 0
chr2:88857219|88857375 hsa-miR-4656 1 0 0
chr2:88857219|88857375 hsa-miR-4657 1 1 0
chr2:88857219|88857375 hsa-miR-4688 1 0 0
chr2:88857219|88857375 hsa-miR-4689 1 1 0
chr2:88857219|88857375 hsa-miR-4710 1 0 0
chr2:88857219|88857375 hsa-miR-4739 1 1 0
chr2:88857219|88857375 hsa-miR-4784 1 0 0
chr2:88857219|88857375 hsa-miR-5194 1 0 0
chr2:88857219|88857375 hsa-miR-5572 1 0 0
chr2:88857219|88857375 hsa-miR-5698 1 0 0
chr2:88857219|88857375 hsa-miR-5787 1 0 0
chr2:88857219|88857375 hsa-miR-6081 0 1 0
chr2:88857219|88857375 hsa-miR-6085 1 0 0
chr2:88857219|88857375 hsa-miR-6086 1 0 0
chr2:88857219|88857375 hsa-miR-6088 1 0 0
chr2:88857219|88857375 hsa-miR-6124 1 0 0
chr2:88857219|88857375 hsa-miR-6133 1 0 0
chr2:88857219|88857375 hsa-miR-6165 1 0 0
chr2:88857219|88857375 hsa-miR-6745 1 0 0
chr2:88857219|88857375 hsa-miR-7150 1 0 0
chr2:88857219|88857375 hsa-miR-8089 1 0 0
chr2:88857219|88857375 hsa-miR-12114 1 0 0
chr2:88857219|88857375 hsa-miR-12118 1 1 0
chr2:88857219|88857375 hsa-miR-4433b-3p 1 0 0
chr2:88857219|88857375 hsa-miR-92a-2-5p 0 1 0
chr2:88857219|88857375 hsa-miR-6734-5p 1 1 0
chr2:88857219|88857375 hsa-miR-6747-5p 1 0 0
chr2:88857219|88857375 hsa-miR-125b-1-3p 1 0 0
chr2:88857219|88857375 hsa-miR-7106-5p 1 0 0
chr2:88857219|88857375 hsa-miR-6825-5p 1 0 0
chr2:88857219|88857375 hsa-miR-6894-5p 1 0 0
chr2:88857219|88857375 hsa-miR-6799-5p 1 0 0
chr2:88857219|88857375 hsa-miR-6510-5p 1 0 0
chr2:88857219|88857375 hsa-miR-6728-5p 1 0 0
chr2:88857219|88857375 hsa-miR-766-5p 1 0 0
chr2:88857219|88857375 hsa-miR-6804-5p 1 0 0
chr2:88857219|88857375 hsa-miR-6833-5p 1 1 0
chr2:88857219|88857375 hsa-miR-5187-5p 1 0 0
chr2:88857219|88857375 hsa-miR-1227-5p 1 0 0
chr2:88857219|88857375 hsa-miR-7114-5p 1 1 0
chr2:88857219|88857375 hsa-miR-6089 1 1 0
chr2:88857219|88857375 hsa-miR-3192-5p 1 0 0
chr2:88857219|88857375 hsa-miR-6757-5p 1 1 0
chr2:88857219|88857375 hsa-miR-6880-5p 1 0 0
chr2:88857219|88857375 hsa-miR-7847-3p 1 0 0
chr2:88857219|88857375 hsa-miR-4695-5p 1 0 0
chr2:88857219|88857375 hsa-miR-4722-5p 1 0 0
chr2:88857219|88857375 hsa-miR-6730-5p 1 0 0
chr2:88857219|88857375 hsa-miR-7154-3p 1 0 0
chr2:88857219|88857375 hsa-miR-4753-5p 1 1 0
chr2:88857219|88857375 hsa-miR-3622b-5p 1 0 0
chr2:88857219|88857375 hsa-miR-6721-5p 1 0 0
chr2:88857219|88857375 hsa-miR-197-5p 1 0 0
chr2:88857219|88857375 hsa-miR-6873-3p 0 1 0
chr2:88857219|88857375 hsa-miR-6742-5p 1 0 0
chr2:88857219|88857375 hsa-miR-6871-5p 1 1 0
chr2:88857219|88857375 hsa-miR-3180-3p 1 0 0
chr2:88857219|88857375 hsa-miR-6748-5p 1 0 0
chr2:88857219|88857375 hsa-miR-6796-5p 1 0 0
chr2:88857219|88857375 hsa-miR-6732-5p 1 1 0
chr2:88857219|88857375 hsa-miR-3190-3p 1 0 0
chr2:88857219|88857375 hsa-miR-6805-5p 1 0 0
chr2:88857219|88857375 hsa-miR-6798-5p 1 0 0
chr2:88857219|88857375 hsa-miR-3126-5p 1 0 0
chr2:88857219|88857375 hsa-miR-6881-5p 1 0 0
chr2:88857219|88857375 hsa-miR-2467-3p 1 0 0
chr2:88857219|88857375 hsa-miR-6782-5p 1 0 0
chr2:88857219|88857375 hsa-miR-3150b-3p 1 0 0
chr2:88857219|88857375 hsa-miR-5008-5p 1 0 0
chr2:88857219|88857375 hsa-miR-6786-5p 1 0 0
chr2:88857219|88857375 hsa-miR-6835-5p 1 0 0
chr2:88857219|88857375 hsa-miR-5088-5p 1 0 0
chr2:88857219|88857375 hsa-miR-3944-3p 1 0 0
chr2:88857219|88857375 hsa-miR-4640-5p 1 0 0
chr2:88857219|88857375 hsa-miR-1228-5p 1 0 0
chr2:88857219|88857375 hsa-miR-92b-5p 1 0 0
chr2:88857219|88857375 hsa-miR-6847-5p 1 0 0
chr2:88857219|88857375 hsa-miR-7854-3p 1 1 0
chr2:88857219|88857375 hsa-miR-4787-5p 1 0 0
chr2:88857219|88857375 hsa-miR-4446-3p 1 0 0
chr2:88857219|88857375 hsa-miR-149-3p 1 1 0
chr2:88857219|88857375 hsa-miR-6824-5p 1 0 0
chr2:88857219|88857375 hsa-miR-6789-5p 1 0 0
chr2:88857219|88857375 hsa-miR-146b-3p 0 1 0
chr2:88857219|88857375 hsa-miR-6781-5p 1 0 0
chr2:88857219|88857375 hsa-miR-6878-5p 1 0 0
chr2:88857219|88857375 hsa-miR-5010-5p 1 0 0
chr2:88857219|88857375 hsa-miR-423-5p 1 0 0
chr2:88857219|88857375 hsa-miR-6867-3p 0 1 0
chr2:88857219|88857375 hsa-miR-6801-5p 1 1 0
chr2:88857219|88857375 hsa-miR-4649-3p 1 0 0
chr2:88857219|88857375 hsa-miR-1207-5p 1 0 0
chr2:88857219|88857375 hsa-miR-1233-5p 1 0 0
chr2:88857219|88857375 hsa-miR-1273h-5p 1 1 0
chr2:88857219|88857375 hsa-miR-4763-3p 1 0 0
chr2:88857219|88857375 hsa-miR-6769b-5p 1 0 0
chr2:88857219|88857375 hsa-miR-6778-5p 1 0 0
chr2:88857219|88857375 hsa-miR-6787-5p 1 0 0
chr2:88857219|88857375 hsa-miR-6812-5p 1 1 0
chr2:88857219|88857375 hsa-miR-6816-5p 1 0 0
chr2:88857219|88857375 hsa-miR-6870-5p 1 0 0
chr2:88857219|88857375 hsa-miR-1343-5p 1 0 0
chr2:88857219|88857375 hsa-miR-5001-5p 1 1 0
chr2:88857219|88857375 hsa-miR-6726-5p 1 0 0
chr2:88857219|88857375 hsa-miR-6737-5p 1 0 0
chr2:88857219|88857375 hsa-miR-6743-5p 1 0 0
chr2:88857219|88857375 hsa-miR-6752-5p 1 1 0
chr2:88857219|88857375 hsa-miR-6754-5p 1 0 0
chr2:88857219|88857375 hsa-miR-6756-5p 1 1 0
chr2:88857219|88857375 hsa-miR-6803-5p 1 0 0
chr2:88857219|88857375 hsa-miR-6813-5p 1 0 0
chr2:88857219|88857375 hsa-miR-6819-5p 1 0 0
chr2:88857219|88857375 hsa-miR-6851-5p 1 0 0
chr2:88857219|88857375 hsa-miR-7107-5p 1 0 0
chr2:88857219|88857375 hsa-miR-7110-5p 1 1 0
chr2:88857219|88857375 hsa-miR-10401-5p 1 0 0
chr2:88857219|88857375 hsa-miR-11181-3p 1 1 0
chr2:88857219|88857375 hsa-miR-1249-5p 1 0 0
chr2:88857219|88857375 hsa-miR-6751-5p 1 1 0
chr2:88857219|88857375 hsa-miR-6763-5p 1 1 0
chr2:88857219|88857375 hsa-miR-6779-5p 1 1 0
chr2:88857219|88857375 hsa-miR-6780a-5p 1 1 0
chr2:88857219|88857375 hsa-miR-6797-5p 1 0 0
chr2:88857219|88857375 hsa-miR-7111-5p 1 0 0
chr2:88857219|88857375 hsa-miR-3620-5p 1 0 0
chr2:88857219|88857375 hsa-miR-4728-5p 1 1 0
chr2:88857219|88857375 hsa-miR-5196-5p 1 0 0
chr2:88857219|88857375 hsa-miR-6780b-5p 1 0 0
chr2:88857219|88857375 hsa-miR-10526-3p 1 0 0
chr2:88857219|88857375 hsa-miR-1237-5p 1 0 0
chr2:88857219|88857375 hsa-miR-1909-3p 1 0 0
chr2:88857219|88857375 hsa-miR-328-5p 1 1 0
chr2:88857219|88857375 hsa-miR-4649-5p 1 0 0
chr2:88857219|88857375 hsa-miR-4726-5p 1 0 0
chr2:88857219|88857375 hsa-miR-4745-5p 1 0 0
chr2:88857219|88857375 hsa-miR-6729-5p 1 0 0
chr2:88857219|88857375 hsa-miR-6738-5p 1 0 0
chr2:88857219|88857375 hsa-miR-6794-5p 1 1 0
chr2:88857219|88857375 hsa-miR-6795-5p 1 0 0
chr2:88857219|88857375 hsa-miR-6846-5p 1 0 0
chr2:88857219|88857375 hsa-miR-6848-5p 1 0 0
chr2:88857219|88857375 hsa-miR-6858-5p 1 1 0
chr2:88857219|88857375 hsa-miR-6883-5p 1 1 0
chr2:88857219|88857375 hsa-miR-6887-5p 1 0 0
chr2:88857219|88857375 hsa-miR-4723-5p 1 0 0
chr2:88857219|88857375 hsa-miR-6885-5p 1 0 0
chr2:88857219|88857375 hsa-miR-939-5p 1 0 0
chr2:88857219|88857375 hsa-miR-4758-5p 1 0 0
chr2:88857219|88857375 hsa-miR-6511a-5p 1 0 0
chr2:88857219|88857375 hsa-miR-1914-3p 1 0 0
chr2:88857219|88857375 hsa-miR-6736-5p 1 0 0
chr2:88857219|88857375 hsa-miR-3173-3p 1 0 0
chr2:88857219|88857375 hsa-miR-4747-5p 1 0 0
chr2:88857219|88857375 hsa-miR-6891-5p 1 1 0
chr2:88857219|88857375 hsa-miR-4472 1 0 0
chr2:88857219|88857375 hsa-miR-4716-3p 1 0 0
chr2:88857219|88857375 hsa-miR-6766-5p 1 1 0
chr2:88857219|88857375 hsa-miR-6785-5p 1 1 0
chr2:88857219|88857375 hsa-miR-4667-5p 1 1 0
chr2:88857219|88857375 hsa-miR-3184-5p 1 0 0
chr2:88857219|88857375 hsa-miR-6762-5p 1 0 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr2:88857219|88857375
ORF Type ORF1
Protein Length 41
Nucleotide Length 123
Protein Sequence MLLSSSLTPSHPLASDPFSTGDLPLLRSSSSSFTSPPSSSL
Nucleotide Sequence CTGCTCCTCAGTTCCAGCCTGACCCCCTCCCATCCTTTGGCCTCTGACCCTTTTTCCACAGGGGACCTACCCCTATTGCGGTCCTCCAGCTCATCTTTCACCTCACCCCCCTCCTCCTCCTTG
CircID chr2:88857219|88857375
ORF Type ORF2
Protein Length 27
Nucleotide Length 81
Protein Sequence MTLFPQGTYPYCGPPAHLSPHPPPPPW
Nucleotide Sequence CTGACCCTTTTTCCACAGGGGACCTACCCCTATTGCGGTCCTCCAGCTCATCTTTCACCTCACCCCCCTCCTCCTCCTTGG
CircID chr2:88857219|88857375
ORF Type ORF3
Protein Length 28
Nucleotide Length 87
Protein Sequence MSWRTAIGVGPLWKKGQRPKDGRGSGWN
Nucleotide Sequence ATGAGCTGGAGGACCGCAATAGGGGTAGGTCCCCTGTGGAAAAAGGGTCAGAGGCCAAAGGATGGGAGGGGGTCAGGCTGGAACTGA
CircID chr2:88857219|88857375
ORF Type ORF4
Protein Length 36
Nucleotide Length 111
Protein Sequence MEDRNRGRSPVEKGSEAKGWEGVRLELRSRWGHFSL
Nucleotide Sequence CTGGAGGACCGCAATAGGGGTAGGTCCCCTGTGGAAAAAGGGTCAGAGGCCAAAGGATGGGAGGGGGTCAGGCTGGAACTGAGGAGCAGGTGGGGGCACTTCTCCCTCTAA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab