CircRNA Information

General Information
circRNA Basic Information
CircID chr2:88857233|88857450
Strand +
CircType exon
Host Gene ENSG00000211592.5;
Algorism CIRI2;
Sequence TACGAGAAACACAAAGTCTACGCCTGCGAAGTCACCCATCAGGGCCTGAGCTCGCCCGTCACAAAGAGCTTCAACAGGGGAGAGTGTTAGAGGGAGAAGTGCCCCCACCTGCTCCTCAGTTCCAGCCTGACCCCCTCCCATCCTTTGGCCTCTGACCCTTTTTCCACAGGGGACCTACCCCTATTGCGGTCCTCCAGCTCATCTTTCACCTCACCCCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr2:88857233|88857450 hsa-miR-141-5p 0 0 1
chr2:88857233|88857450 hsa-miR-141-3p 0 0 1
chr2:88857233|88857450 hsa-miR-200a-5p 0 0 1
chr2:88857233|88857450 hsa-miR-200a-3p 0 0 1
chr2:88857233|88857450 hsa-miR-484 0 0 1
chr2:88857233|88857450 hsa-miR-558 0 0 1
chr2:88857233|88857450 hsa-miR-599 0 0 1
chr2:88857233|88857450 hsa-miR-617 0 0 1
chr2:88857233|88857450 hsa-miR-653-5p 0 0 1
chr2:88857233|88857450 hsa-miR-653-3p 0 0 1
chr2:88857233|88857450 hsa-miR-758-5p 0 0 1
chr2:88857233|88857450 hsa-miR-758-3p 0 0 1
chr2:88857233|88857450 hsa-miR-765 0 0 1
chr2:88857233|88857450 hsa-miR-1291 0 1 1
chr2:88857233|88857450 hsa-miR-1294 0 0 1
chr2:88857233|88857450 hsa-miR-1262 0 1 1
chr2:88857233|88857450 hsa-miR-1267 0 1 1
chr2:88857233|88857450 hsa-miR-127-5p 1 0 1
chr2:88857233|88857450 hsa-miR-331-3p 0 0 1
chr2:88857233|88857450 hsa-miR-556-5p 0 1 1
chr2:88857233|88857450 hsa-miR-642 0 0 1
chr2:88857233|88857450 hsa-miR-1274b 0 0 1
chr2:88857233|88857450 hsa-miR-608 1 0 0
chr2:88857233|88857450 hsa-miR-611 1 0 0
chr2:88857233|88857450 hsa-miR-623 1 0 0
chr2:88857233|88857450 hsa-miR-762 1 0 0
chr2:88857233|88857450 hsa-miR-920 1 0 0
chr2:88857233|88857450 hsa-miR-1257 1 0 0
chr2:88857233|88857450 hsa-miR-3175 1 0 0
chr2:88857233|88857450 hsa-miR-4281 1 0 0
chr2:88857233|88857450 hsa-miR-3652 1 1 0
chr2:88857233|88857450 hsa-miR-3665 0 1 0
chr2:88857233|88857450 hsa-miR-3917 1 0 0
chr2:88857233|88857450 hsa-miR-4430 1 1 0
chr2:88857233|88857450 hsa-miR-4447 0 1 0
chr2:88857233|88857450 hsa-miR-3135b 1 1 0
chr2:88857233|88857450 hsa-miR-4469 0 1 0
chr2:88857233|88857450 hsa-miR-4478 1 0 0
chr2:88857233|88857450 hsa-miR-4488 1 0 0
chr2:88857233|88857450 hsa-miR-4498 1 0 0
chr2:88857233|88857450 hsa-miR-4505 1 0 0
chr2:88857233|88857450 hsa-miR-2392 1 1 0
chr2:88857233|88857450 hsa-miR-4514 1 0 0
chr2:88857233|88857450 hsa-miR-4534 1 0 0
chr2:88857233|88857450 hsa-miR-1587 1 0 0
chr2:88857233|88857450 hsa-miR-4651 1 0 0
chr2:88857233|88857450 hsa-miR-4656 1 0 0
chr2:88857233|88857450 hsa-miR-4657 1 1 0
chr2:88857233|88857450 hsa-miR-4689 1 1 0
chr2:88857233|88857450 hsa-miR-4710 1 0 0
chr2:88857233|88857450 hsa-miR-4767 1 0 0
chr2:88857233|88857450 hsa-miR-5194 1 0 0
chr2:88857233|88857450 hsa-miR-5572 1 0 0
chr2:88857233|88857450 hsa-miR-5787 1 0 0
chr2:88857233|88857450 hsa-miR-6081 0 1 0
chr2:88857233|88857450 hsa-miR-6085 1 0 0
chr2:88857233|88857450 hsa-miR-6086 1 0 0
chr2:88857233|88857450 hsa-miR-6088 1 0 0
chr2:88857233|88857450 hsa-miR-6124 1 0 0
chr2:88857233|88857450 hsa-miR-6127 1 0 0
chr2:88857233|88857450 hsa-miR-6133 1 0 0
chr2:88857233|88857450 hsa-miR-6745 1 0 0
chr2:88857233|88857450 hsa-miR-7150 1 0 0
chr2:88857233|88857450 hsa-miR-8089 1 0 0
chr2:88857233|88857450 hsa-miR-92a-2-5p 0 1 0
chr2:88857233|88857450 hsa-miR-6734-5p 1 1 0
chr2:88857233|88857450 hsa-miR-6747-5p 1 0 0
chr2:88857233|88857450 hsa-miR-6765-5p 1 0 0
chr2:88857233|88857450 hsa-miR-125b-1-3p 1 0 0
chr2:88857233|88857450 hsa-miR-7106-5p 1 0 0
chr2:88857233|88857450 hsa-miR-6825-5p 1 0 0
chr2:88857233|88857450 hsa-miR-6894-5p 1 0 0
chr2:88857233|88857450 hsa-miR-6854-5p 0 1 0
chr2:88857233|88857450 hsa-miR-6799-5p 1 0 0
chr2:88857233|88857450 hsa-miR-6728-5p 1 0 0
chr2:88857233|88857450 hsa-miR-6804-5p 1 0 0
chr2:88857233|88857450 hsa-miR-6833-5p 1 1 0
chr2:88857233|88857450 hsa-miR-5187-5p 1 0 0
chr2:88857233|88857450 hsa-miR-7114-5p 1 1 0
chr2:88857233|88857450 hsa-miR-6089 1 1 0
chr2:88857233|88857450 hsa-miR-3192-5p 1 0 0
chr2:88857233|88857450 hsa-miR-6757-5p 1 1 0
chr2:88857233|88857450 hsa-miR-7847-3p 1 0 0
chr2:88857233|88857450 hsa-miR-4722-5p 1 0 0
chr2:88857233|88857450 hsa-miR-6730-5p 1 0 0
chr2:88857233|88857450 hsa-miR-4753-5p 0 1 0
chr2:88857233|88857450 hsa-miR-3622b-5p 1 0 0
chr2:88857233|88857450 hsa-miR-197-5p 1 0 0
chr2:88857233|88857450 hsa-miR-27b-5p 0 1 0
chr2:88857233|88857450 hsa-miR-6873-3p 0 1 0
chr2:88857233|88857450 hsa-miR-6742-5p 1 0 0
chr2:88857233|88857450 hsa-miR-6871-5p 1 1 0
chr2:88857233|88857450 hsa-miR-6748-5p 1 0 0
chr2:88857233|88857450 hsa-miR-6796-5p 1 0 0
chr2:88857233|88857450 hsa-miR-6732-5p 1 1 0
chr2:88857233|88857450 hsa-miR-3190-3p 1 0 0
chr2:88857233|88857450 hsa-miR-6805-5p 1 0 0
chr2:88857233|88857450 hsa-miR-6881-5p 1 0 0
chr2:88857233|88857450 hsa-miR-6782-5p 1 0 0
chr2:88857233|88857450 hsa-miR-6786-5p 1 0 0
chr2:88857233|88857450 hsa-miR-6835-5p 1 0 0
chr2:88857233|88857450 hsa-miR-5088-5p 1 0 0
chr2:88857233|88857450 hsa-miR-3944-3p 1 0 0
chr2:88857233|88857450 hsa-miR-4640-5p 1 0 0
chr2:88857233|88857450 hsa-miR-1228-5p 1 0 0
chr2:88857233|88857450 hsa-miR-4690-5p 1 0 0
chr2:88857233|88857450 hsa-miR-7854-3p 1 1 0
chr2:88857233|88857450 hsa-miR-149-3p 1 1 0
chr2:88857233|88857450 hsa-miR-193a-5p 1 0 0
chr2:88857233|88857450 hsa-miR-6824-5p 1 0 0
chr2:88857233|88857450 hsa-miR-6789-5p 1 0 0
chr2:88857233|88857450 hsa-miR-146b-3p 0 1 0
chr2:88857233|88857450 hsa-miR-6781-5p 1 0 0
chr2:88857233|88857450 hsa-miR-6878-5p 1 0 0
chr2:88857233|88857450 hsa-miR-6867-3p 0 1 0
chr2:88857233|88857450 hsa-miR-6801-5p 1 1 0
chr2:88857233|88857450 hsa-miR-4649-3p 1 0 0
chr2:88857233|88857450 hsa-miR-3124-5p 1 0 0
chr2:88857233|88857450 hsa-miR-4639-3p 0 1 0
chr2:88857233|88857450 hsa-miR-1207-5p 1 0 0
chr2:88857233|88857450 hsa-miR-1233-5p 1 0 0
chr2:88857233|88857450 hsa-miR-1273h-5p 1 1 0
chr2:88857233|88857450 hsa-miR-4763-3p 1 0 0
chr2:88857233|88857450 hsa-miR-6769b-5p 1 0 0
chr2:88857233|88857450 hsa-miR-6778-5p 1 0 0
chr2:88857233|88857450 hsa-miR-6787-5p 1 0 0
chr2:88857233|88857450 hsa-miR-6812-5p 1 1 0
chr2:88857233|88857450 hsa-miR-6816-5p 1 0 0
chr2:88857233|88857450 hsa-miR-1343-5p 1 0 0
chr2:88857233|88857450 hsa-miR-5001-5p 1 1 0
chr2:88857233|88857450 hsa-miR-6726-5p 1 0 0
chr2:88857233|88857450 hsa-miR-6737-5p 1 0 0
chr2:88857233|88857450 hsa-miR-6743-5p 1 0 0
chr2:88857233|88857450 hsa-miR-6752-5p 1 1 0
chr2:88857233|88857450 hsa-miR-6756-5p 1 1 0
chr2:88857233|88857450 hsa-miR-6803-5p 1 0 0
chr2:88857233|88857450 hsa-miR-6813-5p 1 0 0
chr2:88857233|88857450 hsa-miR-6819-5p 1 0 0
chr2:88857233|88857450 hsa-miR-6851-5p 1 0 0
chr2:88857233|88857450 hsa-miR-7107-5p 1 0 0
chr2:88857233|88857450 hsa-miR-7110-5p 1 1 0
chr2:88857233|88857450 hsa-miR-10401-5p 1 0 0
chr2:88857233|88857450 hsa-miR-11181-3p 1 0 0
chr2:88857233|88857450 hsa-miR-6751-5p 1 1 0
chr2:88857233|88857450 hsa-miR-6763-5p 1 1 0
chr2:88857233|88857450 hsa-miR-6779-5p 1 1 0
chr2:88857233|88857450 hsa-miR-6780a-5p 1 1 0
chr2:88857233|88857450 hsa-miR-6797-5p 1 0 0
chr2:88857233|88857450 hsa-miR-7111-5p 1 0 0
chr2:88857233|88857450 hsa-miR-3620-5p 1 0 0
chr2:88857233|88857450 hsa-miR-4728-5p 1 1 0
chr2:88857233|88857450 hsa-miR-5196-5p 1 0 0
chr2:88857233|88857450 hsa-miR-328-5p 1 1 0
chr2:88857233|88857450 hsa-miR-4649-5p 1 1 0
chr2:88857233|88857450 hsa-miR-4745-5p 1 0 0
chr2:88857233|88857450 hsa-miR-6729-5p 1 0 0
chr2:88857233|88857450 hsa-miR-6738-5p 1 0 0
chr2:88857233|88857450 hsa-miR-6794-5p 1 0 0
chr2:88857233|88857450 hsa-miR-6795-5p 1 0 0
chr2:88857233|88857450 hsa-miR-6858-5p 1 1 0
chr2:88857233|88857450 hsa-miR-6883-5p 1 1 0
chr2:88857233|88857450 hsa-miR-6887-5p 1 0 0
chr2:88857233|88857450 hsa-miR-939-5p 1 1 0
chr2:88857233|88857450 hsa-miR-4758-5p 1 0 0
chr2:88857233|88857450 hsa-miR-10394-3p 1 0 0
chr2:88857233|88857450 hsa-miR-30c-1-3p 1 0 0
chr2:88857233|88857450 hsa-miR-4664-5p 1 0 0
chr2:88857233|88857450 hsa-miR-1914-3p 1 0 0
chr2:88857233|88857450 hsa-miR-6736-5p 1 0 0
chr2:88857233|88857450 hsa-miR-4716-3p 1 0 0
chr2:88857233|88857450 hsa-miR-6766-5p 1 1 0
chr2:88857233|88857450 hsa-miR-6785-5p 1 1 0
chr2:88857233|88857450 hsa-miR-4667-5p 1 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr2:88857233|88857450
ORF Type ORF1
Protein Length 36
Nucleotide Length 108
Protein Sequence MLLSSSLTPSHPLASDPFSTGDLPLLRSSSSSFTSP
Nucleotide Sequence CTGCTCCTCAGTTCCAGCCTGACCCCCTCCCATCCTTTGGCCTCTGACCCTTTTTCCACAGGGGACCTACCCCTATTGCGGTCCTCCAGCTCATCTTTCACCTCACCC
CircID chr2:88857233|88857450
ORF Type ORF2
Protein Length 43
Nucleotide Length 132
Protein Sequence MRSHPSGPELARHKELQQGRVLEGEVPPPAPQFQPDPLPSFGL
Nucleotide Sequence CTGCGAAGTCACCCATCAGGGCCTGAGCTCGCCCGTCACAAAGAGCTTCAACAGGGGAGAGTGTTAGAGGGAGAAGTGCCCCCACCTGCTCCTCAGTTCCAGCCTGACCCCCTCCCATCCTTTGGCCTCTGA
CircID chr2:88857233|88857450
ORF Type ORF3
Protein Length 36
Nucleotide Length 111
Protein Sequence MEDRNRGRSPVEKGSEAKGWEGVRLELRSRWGHFSL
Nucleotide Sequence CTGGAGGACCGCAATAGGGGTAGGTCCCCTGTGGAAAAAGGGTCAGAGGCCAAAGGATGGGAGGGGGTCAGGCTGGAACTGAGGAGCAGGTGGGGGCACTTCTCCCTCTAA
CircID chr2:88857233|88857450
ORF Type ORF4
Protein Length 28
Nucleotide Length 87
Protein Sequence MSWRTAIGVGPLWKKGQRPKDGRGSGWN
Nucleotide Sequence ATGAGCTGGAGGACCGCAATAGGGGTAGGTCCCCTGTGGAAAAAGGGTCAGAGGCCAAAGGATGGGAGGGGGTCAGGCTGGAACTGA
CircID chr2:88857233|88857450
ORF Type ORF5
Protein Length 47
Nucleotide Length 141
Protein Sequence MGGGQAGTEEQVGALLPLTLSPVEALCDGRAQALMGDFAGVDFVFLV
Nucleotide Sequence ATGGGAGGGGGTCAGGCTGGAACTGAGGAGCAGGTGGGGGCACTTCTCCCTCTAACACTCTCCCCTGTTGAAGCTCTTTGTGACGGGCGAGCTCAGGCCCTGATGGGTGACTTCGCAGGCGTAGACTTTGTGTTTCTCGTA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab