CircRNA Information

General Information
circRNA Basic Information
CircID chr2:88857294|88857504
Strand +
CircType exon
Host Gene ENSG00000211592.5;
Algorism CIRI2;
Sequence AGCAAGGACAGCACCTACAGCCTCAGCAGCACCCTGACGCTGAGCAAAGCAGACTACGAGAAACACAAAGTCTACGCCTGCGAAGTCACCCATCAGGGCCTGAGCTCGCCCGTCACAAAGAGCTTCAACAGGGGAGAGTGTTAGAGGGAGAAGTGCCCCCACCTGCTCCTCAGTTCCAGCCTGACCCCCTCCCATCCTTTGGCCTCTGACC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr2:88857294|88857504 hsa-miR-141-5p 0 0 1
chr2:88857294|88857504 hsa-miR-141-3p 0 0 1
chr2:88857294|88857504 hsa-miR-200a-5p 0 0 1
chr2:88857294|88857504 hsa-miR-200a-3p 0 0 1
chr2:88857294|88857504 hsa-miR-484 0 0 1
chr2:88857294|88857504 hsa-miR-599 0 0 1
chr2:88857294|88857504 hsa-miR-617 0 0 1
chr2:88857294|88857504 hsa-miR-626 0 0 1
chr2:88857294|88857504 hsa-miR-653-5p 0 0 1
chr2:88857294|88857504 hsa-miR-653-3p 0 0 1
chr2:88857294|88857504 hsa-miR-758-5p 0 0 1
chr2:88857294|88857504 hsa-miR-758-3p 0 0 1
chr2:88857294|88857504 hsa-miR-1178-5p 0 0 1
chr2:88857294|88857504 hsa-miR-1178-3p 0 0 1
chr2:88857294|88857504 hsa-miR-1291 1 0 1
chr2:88857294|88857504 hsa-miR-1262 0 0 1
chr2:88857294|88857504 hsa-miR-1267 0 0 1
chr2:88857294|88857504 hsa-miR-127-5p 1 0 1
chr2:88857294|88857504 hsa-miR-485-5p 0 0 1
chr2:88857294|88857504 hsa-miR-502-5p 0 0 1
chr2:88857294|88857504 hsa-miR-331-3p 0 0 1
chr2:88857294|88857504 hsa-miR-642 0 0 1
chr2:88857294|88857504 hsa-miR-1274b 0 0 1
chr2:88857294|88857504 hsa-miR-608 1 0 0
chr2:88857294|88857504 hsa-miR-1294 1 0 0
chr2:88857294|88857504 hsa-miR-3188 1 0 0
chr2:88857294|88857504 hsa-miR-3652 0 1 0
chr2:88857294|88857504 hsa-miR-3665 0 1 0
chr2:88857294|88857504 hsa-miR-3917 1 0 0
chr2:88857294|88857504 hsa-miR-3937 1 0 0
chr2:88857294|88857504 hsa-miR-4430 0 1 0
chr2:88857294|88857504 hsa-miR-4447 0 1 0
chr2:88857294|88857504 hsa-miR-3135b 1 0 0
chr2:88857294|88857504 hsa-miR-4469 0 1 0
chr2:88857294|88857504 hsa-miR-4478 1 0 0
chr2:88857294|88857504 hsa-miR-4488 1 0 0
chr2:88857294|88857504 hsa-miR-2392 0 1 0
chr2:88857294|88857504 hsa-miR-4651 1 0 0
chr2:88857294|88857504 hsa-miR-4689 1 0 0
chr2:88857294|88857504 hsa-miR-4767 1 0 0
chr2:88857294|88857504 hsa-miR-5047 1 0 0
chr2:88857294|88857504 hsa-miR-5787 1 0 0
chr2:88857294|88857504 hsa-miR-6081 0 1 0
chr2:88857294|88857504 hsa-miR-6085 1 0 0
chr2:88857294|88857504 hsa-miR-6133 1 0 0
chr2:88857294|88857504 hsa-miR-6745 1 0 0
chr2:88857294|88857504 hsa-miR-7150 1 0 0
chr2:88857294|88857504 hsa-miR-7974 1 0 0
chr2:88857294|88857504 hsa-miR-8089 1 0 0
chr2:88857294|88857504 hsa-miR-92a-2-5p 0 1 0
chr2:88857294|88857504 hsa-miR-6765-5p 1 0 0
chr2:88857294|88857504 hsa-miR-125b-1-3p 1 0 0
chr2:88857294|88857504 hsa-miR-6854-5p 0 1 0
chr2:88857294|88857504 hsa-miR-6799-5p 1 0 0
chr2:88857294|88857504 hsa-miR-6728-5p 1 0 0
chr2:88857294|88857504 hsa-miR-6804-5p 1 0 0
chr2:88857294|88857504 hsa-miR-7114-5p 1 0 0
chr2:88857294|88857504 hsa-miR-6089 1 0 0
chr2:88857294|88857504 hsa-miR-3192-5p 1 0 0
chr2:88857294|88857504 hsa-miR-6757-5p 1 0 0
chr2:88857294|88857504 hsa-miR-4753-5p 0 1 0
chr2:88857294|88857504 hsa-miR-7160-5p 1 0 0
chr2:88857294|88857504 hsa-miR-6741-5p 1 0 0
chr2:88857294|88857504 hsa-miR-27b-5p 0 1 0
chr2:88857294|88857504 hsa-miR-6873-3p 0 1 0
chr2:88857294|88857504 hsa-miR-6871-5p 1 0 0
chr2:88857294|88857504 hsa-miR-6748-5p 1 0 0
chr2:88857294|88857504 hsa-miR-6772-5p 1 0 0
chr2:88857294|88857504 hsa-miR-6829-5p 1 0 0
chr2:88857294|88857504 hsa-miR-6732-5p 1 0 0
chr2:88857294|88857504 hsa-miR-2467-5p 1 0 0
chr2:88857294|88857504 hsa-miR-2467-3p 1 0 0
chr2:88857294|88857504 hsa-miR-4640-5p 1 0 0
chr2:88857294|88857504 hsa-miR-1228-5p 1 0 0
chr2:88857294|88857504 hsa-miR-4690-5p 1 0 0
chr2:88857294|88857504 hsa-miR-149-3p 1 0 0
chr2:88857294|88857504 hsa-miR-193a-5p 1 0 0
chr2:88857294|88857504 hsa-let-7i-5p 1 0 0
chr2:88857294|88857504 hsa-miR-1251-3p 0 1 0
chr2:88857294|88857504 hsa-miR-6867-3p 0 1 0
chr2:88857294|88857504 hsa-miR-6801-5p 0 1 0
chr2:88857294|88857504 hsa-miR-4649-3p 1 0 0
chr2:88857294|88857504 hsa-miR-2277-5p 1 0 0
chr2:88857294|88857504 hsa-miR-3124-5p 1 0 0
chr2:88857294|88857504 hsa-miR-4639-3p 0 1 0
chr2:88857294|88857504 hsa-miR-1233-5p 1 0 0
chr2:88857294|88857504 hsa-miR-1273h-5p 1 0 0
chr2:88857294|88857504 hsa-miR-4763-3p 1 0 0
chr2:88857294|88857504 hsa-miR-6769b-5p 1 0 0
chr2:88857294|88857504 hsa-miR-6778-5p 1 0 0
chr2:88857294|88857504 hsa-miR-6787-5p 1 0 0
chr2:88857294|88857504 hsa-miR-6816-5p 1 0 0
chr2:88857294|88857504 hsa-miR-5001-5p 0 1 0
chr2:88857294|88857504 hsa-miR-6726-5p 1 0 0
chr2:88857294|88857504 hsa-miR-6743-5p 1 0 0
chr2:88857294|88857504 hsa-miR-6752-5p 1 0 0
chr2:88857294|88857504 hsa-miR-6756-5p 1 0 0
chr2:88857294|88857504 hsa-miR-6803-5p 1 0 0
chr2:88857294|88857504 hsa-miR-6819-5p 1 0 0
chr2:88857294|88857504 hsa-miR-6851-5p 1 0 0
chr2:88857294|88857504 hsa-miR-6751-5p 1 0 0
chr2:88857294|88857504 hsa-miR-6763-5p 1 0 0
chr2:88857294|88857504 hsa-miR-6779-5p 1 0 0
chr2:88857294|88857504 hsa-miR-6780a-5p 1 0 0
chr2:88857294|88857504 hsa-miR-6797-5p 1 0 0
chr2:88857294|88857504 hsa-miR-7111-5p 1 0 0
chr2:88857294|88857504 hsa-miR-4728-5p 1 0 0
chr2:88857294|88857504 hsa-miR-5196-5p 1 0 0
chr2:88857294|88857504 hsa-miR-1909-3p 1 0 0
chr2:88857294|88857504 hsa-miR-328-5p 1 0 0
chr2:88857294|88857504 hsa-miR-4649-5p 1 0 0
chr2:88857294|88857504 hsa-miR-6729-5p 1 0 0
chr2:88857294|88857504 hsa-miR-6738-5p 1 0 0
chr2:88857294|88857504 hsa-miR-6795-5p 1 0 0
chr2:88857294|88857504 hsa-miR-6858-5p 1 0 0
chr2:88857294|88857504 hsa-miR-6883-5p 1 0 0
chr2:88857294|88857504 hsa-miR-6887-5p 1 0 0
chr2:88857294|88857504 hsa-miR-939-5p 1 0 0
chr2:88857294|88857504 hsa-miR-10394-3p 1 0 0
chr2:88857294|88857504 hsa-miR-1914-3p 1 0 0
chr2:88857294|88857504 hsa-miR-6766-5p 1 0 0
chr2:88857294|88857504 hsa-miR-6785-5p 1 0 0
chr2:88857294|88857504 hsa-miR-4667-5p 1 0 0
chr2:88857294|88857504 hsa-miR-6791-5p 1 0 0
chr2:88857294|88857504 hsa-miR-6884-5p 1 0 0
chr2:88857294|88857504 hsa-miR-6811-5p 1 0 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

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    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr2:88857294|88857504
ORF Type ORF1
Protein Length 36
Nucleotide Length 111
Protein Sequence MTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
Nucleotide Sequence CTGACGCTGAGCAAAGCAGACTACGAGAAACACAAAGTCTACGCCTGCGAAGTCACCCATCAGGGCCTGAGCTCGCCCGTCACAAAGAGCTTCAACAGGGGAGAGTGTTAG
CircID chr2:88857294|88857504
ORF Type ORF2
Protein Length 43
Nucleotide Length 132
Protein Sequence MRSHPSGPELARHKELQQGRVLEGEVPPPAPQFQPDPLPSFGL
Nucleotide Sequence CTGCGAAGTCACCCATCAGGGCCTGAGCTCGCCCGTCACAAAGAGCTTCAACAGGGGAGAGTGTTAGAGGGAGAAGTGCCCCCACCTGCTCCTCAGTTCCAGCCTGACCCCCTCCCATCCTTTGGCCTCTGA
CircID chr2:88857294|88857504
ORF Type ORF3
Protein Length 65
Nucleotide Length 195
Protein Sequence MGGGQAGTEEQVGALLPLTLSPVEALCDGRAQALMGDFAGVDFVFLVVCFAQRQGAAEAVGAVLA
Nucleotide Sequence ATGGGAGGGGGTCAGGCTGGAACTGAGGAGCAGGTGGGGGCACTTCTCCCTCTAACACTCTCCCCTGTTGAAGCTCTTTGTGACGGGCGAGCTCAGGCCCTGATGGGTGACTTCGCAGGCGTAGACTTTGTGTTTCTCGTAGTCTGCTTTGCTCAGCGTCAGGGTGCTGCTGAGGCTGTAGGTGCTGTCCTTGCT
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab