CircRNA Information

General Information
circRNA Basic Information
CircID chr2:88857343|88857668
Strand +
CircType exon
Host Gene ENSG00000211592.5;
Algorism CIRI2;
Sequence CATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGCCCTCCAATCGGGTAACTCCCAGGAGAGTGTCACAGAGCAGGACAGCAAGGACAGCACCTACAGCCTCAGCAGCACCCTGACGCTGAGCAAAGCAGACTACGAGAAACACAAAGTCTACGCCTGCGAAGTCACCCATCAGGGCCTGAGCTCGCCCGTCACAAAGAGCTTCAACAGGGGAGAGTGTTAGAGGGAGAAGTGCCCCCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr2:88857343|88857668 hsa-miR-214-5p 0 0 1
chr2:88857343|88857668 hsa-miR-214-3p 0 0 1
chr2:88857343|88857668 hsa-miR-141-5p 0 0 1
chr2:88857343|88857668 hsa-miR-141-3p 0 0 1
chr2:88857343|88857668 hsa-miR-200a-5p 0 0 1
chr2:88857343|88857668 hsa-miR-200a-3p 0 0 1
chr2:88857343|88857668 hsa-miR-370-5p 0 0 1
chr2:88857343|88857668 hsa-miR-370-3p 0 0 1
chr2:88857343|88857668 hsa-miR-326 0 0 1
chr2:88857343|88857668 hsa-miR-599 0 0 1
chr2:88857343|88857668 hsa-miR-617 0 0 1
chr2:88857343|88857668 hsa-miR-626 0 0 1
chr2:88857343|88857668 hsa-miR-653-5p 0 0 1
chr2:88857343|88857668 hsa-miR-653-3p 0 0 1
chr2:88857343|88857668 hsa-miR-758-5p 0 0 1
chr2:88857343|88857668 hsa-miR-758-3p 0 0 1
chr2:88857343|88857668 hsa-miR-922 0 0 1
chr2:88857343|88857668 hsa-miR-1178-5p 0 0 1
chr2:88857343|88857668 hsa-miR-1178-3p 0 0 1
chr2:88857343|88857668 hsa-miR-1291 1 1 1
chr2:88857343|88857668 hsa-miR-1305 0 0 1
chr2:88857343|88857668 hsa-miR-1262 0 1 1
chr2:88857343|88857668 hsa-miR-1267 0 1 1
chr2:88857343|88857668 hsa-miR-1827 0 1 1
chr2:88857343|88857668 hsa-miR-127-5p 1 0 1
chr2:88857343|88857668 hsa-miR-485-5p 0 1 1
chr2:88857343|88857668 hsa-miR-525-5p 0 0 1
chr2:88857343|88857668 hsa-miR-502-5p 0 1 1
chr2:88857343|88857668 hsa-miR-331-3p 0 0 1
chr2:88857343|88857668 hsa-miR-767-3p 0 1 1
chr2:88857343|88857668 hsa-miR-520a-5p 0 0 1
chr2:88857343|88857668 hsa-miR-330-5p 0 0 1
chr2:88857343|88857668 hsa-miR-542-3p 0 0 1
chr2:88857343|88857668 hsa-miR-642 0 0 1
chr2:88857343|88857668 hsa-miR-1274b 0 0 1
chr2:88857343|88857668 hsa-miR-768-5p 0 0 1
chr2:88857343|88857668 hsa-miR-663 0 0 1
chr2:88857343|88857668 hsa-miR-623 1 0 0
chr2:88857343|88857668 hsa-miR-636 1 0 0
chr2:88857343|88857668 hsa-miR-3132 1 0 0
chr2:88857343|88857668 hsa-miR-3141 1 0 0
chr2:88857343|88857668 hsa-miR-3183 0 1 0
chr2:88857343|88857668 hsa-miR-4298 1 0 0
chr2:88857343|88857668 hsa-miR-4269 0 1 0
chr2:88857343|88857668 hsa-miR-4291 0 1 0
chr2:88857343|88857668 hsa-miR-3907 1 0 0
chr2:88857343|88857668 hsa-miR-4425 1 0 0
chr2:88857343|88857668 hsa-miR-4447 0 1 0
chr2:88857343|88857668 hsa-miR-4469 0 1 0
chr2:88857343|88857668 hsa-miR-4488 1 0 0
chr2:88857343|88857668 hsa-miR-5047 1 0 0
chr2:88857343|88857668 hsa-miR-6127 1 0 0
chr2:88857343|88857668 hsa-miR-7974 1 1 0
chr2:88857343|88857668 hsa-miR-8072 1 0 0
chr2:88857343|88857668 hsa-miR-12128 1 0 0
chr2:88857343|88857668 hsa-miR-6749-3p 1 0 0
chr2:88857343|88857668 hsa-miR-152-5p 1 0 0
chr2:88857343|88857668 hsa-miR-6765-5p 1 0 0
chr2:88857343|88857668 hsa-miR-6854-5p 0 1 0
chr2:88857343|88857668 hsa-miR-6728-5p 1 0 0
chr2:88857343|88857668 hsa-miR-6515-5p 0 1 0
chr2:88857343|88857668 hsa-miR-3192-5p 0 1 0
chr2:88857343|88857668 hsa-miR-7160-5p 1 0 0
chr2:88857343|88857668 hsa-miR-6741-5p 1 0 0
chr2:88857343|88857668 hsa-miR-6806-5p 1 0 0
chr2:88857343|88857668 hsa-miR-4677-5p 1 0 0
chr2:88857343|88857668 hsa-miR-27b-5p 0 1 0
chr2:88857343|88857668 hsa-miR-6873-3p 0 1 0
chr2:88857343|88857668 hsa-miR-1915-5p 1 0 0
chr2:88857343|88857668 hsa-miR-6772-5p 1 0 0
chr2:88857343|88857668 hsa-miR-2467-3p 1 0 0
chr2:88857343|88857668 hsa-miR-6728-3p 1 0 0
chr2:88857343|88857668 hsa-miR-6815-3p 1 0 0
chr2:88857343|88857668 hsa-miR-6740-5p 1 0 0
chr2:88857343|88857668 hsa-miR-185-5p 1 0 0
chr2:88857343|88857668 hsa-miR-4690-5p 1 0 0
chr2:88857343|88857668 hsa-miR-1266-3p 1 0 0
chr2:88857343|88857668 hsa-miR-193a-5p 1 0 0
chr2:88857343|88857668 hsa-miR-4694-5p 0 1 0
chr2:88857343|88857668 hsa-let-7i-5p 1 0 0
chr2:88857343|88857668 hsa-miR-584-3p 0 1 0
chr2:88857343|88857668 hsa-miR-1251-3p 0 1 0
chr2:88857343|88857668 hsa-miR-6867-3p 0 1 0
chr2:88857343|88857668 hsa-miR-4727-3p 1 0 0
chr2:88857343|88857668 hsa-miR-2355-3p 1 1 0
chr2:88857343|88857668 hsa-miR-7151-5p 0 1 0
chr2:88857343|88857668 hsa-miR-6777-3p 1 0 0
chr2:88857343|88857668 hsa-miR-3124-5p 1 0 0
chr2:88857343|88857668 hsa-miR-4639-3p 0 1 0
chr2:88857343|88857668 hsa-miR-6838-3p 1 0 0
chr2:88857343|88857668 hsa-miR-1207-5p 1 0 0
chr2:88857343|88857668 hsa-miR-6787-5p 1 0 0
chr2:88857343|88857668 hsa-miR-6816-5p 1 0 0
chr2:88857343|88857668 hsa-miR-6865-5p 1 0 0
chr2:88857343|88857668 hsa-miR-6743-5p 1 0 0
chr2:88857343|88857668 hsa-miR-6803-5p 1 0 0
chr2:88857343|88857668 hsa-miR-6815-5p 1 0 0
chr2:88857343|88857668 hsa-miR-6797-5p 1 0 0
chr2:88857343|88857668 hsa-miR-10396b-5p 1 0 0
chr2:88857343|88857668 hsa-miR-1909-3p 1 0 0
chr2:88857343|88857668 hsa-miR-328-5p 1 0 0
chr2:88857343|88857668 hsa-miR-449c-5p 0 1 0
chr2:88857343|88857668 hsa-miR-4649-5p 1 1 0
chr2:88857343|88857668 hsa-miR-6729-5p 1 0 0
chr2:88857343|88857668 hsa-miR-4697-5p 1 0 0
chr2:88857343|88857668 hsa-miR-6885-5p 1 0 0
chr2:88857343|88857668 hsa-miR-939-5p 1 1 0
chr2:88857343|88857668 hsa-miR-10394-3p 1 0 0
chr2:88857343|88857668 hsa-miR-34b-5p 0 1 0
chr2:88857343|88857668 hsa-miR-5008-3p 1 0 0
chr2:88857343|88857668 hsa-miR-6791-5p 1 0 0
chr2:88857343|88857668 hsa-miR-4723-3p 0 1 0
chr2:88857343|88857668 hsa-miR-6884-5p 1 1 0
chr2:88857343|88857668 hsa-miR-6744-3p 0 1 0
chr2:88857343|88857668 hsa-miR-6876-3p 1 1 0
chr2:88857343|88857668 hsa-miR-3619-5p 1 1 0
chr2:88857343|88857668 hsa-miR-494-5p 1 0 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr2:88857343|88857668
ORF Type ORF1
Protein Length 28
Nucleotide Length 84
Protein Sequence MRSHPSGPELARHKELQQGRVLEGEVPP
Nucleotide Sequence CTGCGAAGTCACCCATCAGGGCCTGAGCTCGCCCGTCACAAAGAGCTTCAACAGGGGAGAGTGTTAGAGGGAGAAGTGCCCCCA
CircID chr2:88857343|88857668
ORF Type ORF2
Protein Length 90
Nucleotide Length 273
Protein Sequence MKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
Nucleotide Sequence TTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGCCCTCCAATCGGGTAACTCCCAGGAGAGTGTCACAGAGCAGGACAGCAAGGACAGCACCTACAGCCTCAGCAGCACCCTGACGCTGAGCAAAGCAGACTACGAGAAACACAAAGTCTACGCCTGCGAAGTCACCCATCAGGGCCTGAGCTCGCCCGTCACAAAGAGCTTCAACAGGGGAGAGTGTTAG
CircID chr2:88857343|88857668
ORF Type ORF3
Protein Length 86
Nucleotide Length 258
Protein Sequence MMGDFAGVDFVFLVVCFAQRQGAAEAVGAVLAVLLCDTLLGVTRLEGVIHLPLYFGLSGIEVIQQAHNRGSSRFQLLIRWREDEDR
Nucleotide Sequence CTGATGGGTGACTTCGCAGGCGTAGACTTTGTGTTTCTCGTAGTCTGCTTTGCTCAGCGTCAGGGTGCTGCTGAGGCTGTAGGTGCTGTCCTTGCTGTCCTGCTCTGTGACACTCTCCTGGGAGTTACCCGATTGGAGGGCGTTATCCACCTTCCACTGTACTTTGGCCTCTCTGGGATAGAAGTTATTCAGCAGGCACACAACAGAGGCAGTTCCAGATTTCAACTGCTCATCAGATGGCGGGAAGATGAAGACAGA
CircID chr2:88857343|88857668
ORF Type ORF4
Protein Length 31
Nucleotide Length 96
Protein Sequence MSLLSCSVTLSWELPDWRALSTFHCTLASLG
Nucleotide Sequence CTGTCCTTGCTGTCCTGCTCTGTGACACTCTCCTGGGAGTTACCCGATTGGAGGGCGTTATCCACCTTCCACTGTACTTTGGCCTCTCTGGGATAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab