CircRNA Information

General Information
circRNA Basic Information
CircID chr2:88857491|88857668
Strand +
CircType exon
Host Gene ENSG00000211592.5;
Algorism CIRI2;
Sequence CATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGCCCTCCAATCGGGTAACTCCCAGGAGAGTGTCACAGAGCAGGACAGCAAGGACAGCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr2:88857491|88857668 hsa-miR-214-5p 0 0 1
chr2:88857491|88857668 hsa-miR-214-3p 0 0 1
chr2:88857491|88857668 hsa-miR-370-5p 0 0 1
chr2:88857491|88857668 hsa-miR-370-3p 0 0 1
chr2:88857491|88857668 hsa-miR-326 0 0 1
chr2:88857491|88857668 hsa-miR-626 0 0 1
chr2:88857491|88857668 hsa-miR-922 0 0 1
chr2:88857491|88857668 hsa-miR-1305 0 0 1
chr2:88857491|88857668 hsa-miR-1827 0 1 1
chr2:88857491|88857668 hsa-miR-525-5p 0 0 1
chr2:88857491|88857668 hsa-miR-502-5p 1 1 1
chr2:88857491|88857668 hsa-miR-767-3p 0 1 1
chr2:88857491|88857668 hsa-miR-520a-5p 0 0 1
chr2:88857491|88857668 hsa-miR-330-5p 0 0 1
chr2:88857491|88857668 hsa-miR-542-3p 0 0 1
chr2:88857491|88857668 hsa-miR-768-5p 0 0 1
chr2:88857491|88857668 hsa-miR-663 0 0 1
chr2:88857491|88857668 hsa-miR-636 1 0 0
chr2:88857491|88857668 hsa-miR-3132 1 0 0
chr2:88857491|88857668 hsa-miR-3141 1 0 0
chr2:88857491|88857668 hsa-miR-3183 0 1 0
chr2:88857491|88857668 hsa-miR-4298 1 0 0
chr2:88857491|88857668 hsa-miR-4269 0 1 0
chr2:88857491|88857668 hsa-miR-4291 0 1 0
chr2:88857491|88857668 hsa-miR-4425 1 0 0
chr2:88857491|88857668 hsa-miR-6127 1 0 0
chr2:88857491|88857668 hsa-miR-8072 1 0 0
chr2:88857491|88857668 hsa-miR-12128 1 0 0
chr2:88857491|88857668 hsa-miR-511-5p 1 0 0
chr2:88857491|88857668 hsa-miR-152-5p 1 0 0
chr2:88857491|88857668 hsa-miR-3194-3p 1 0 0
chr2:88857491|88857668 hsa-miR-6765-5p 1 0 0
chr2:88857491|88857668 hsa-miR-6728-5p 1 0 0
chr2:88857491|88857668 hsa-miR-6515-5p 0 1 0
chr2:88857491|88857668 hsa-miR-3192-5p 0 1 0
chr2:88857491|88857668 hsa-miR-6806-5p 1 0 0
chr2:88857491|88857668 hsa-miR-4677-5p 1 0 0
chr2:88857491|88857668 hsa-miR-1915-5p 1 0 0
chr2:88857491|88857668 hsa-miR-3663-5p 1 0 0
chr2:88857491|88857668 hsa-miR-2467-3p 1 0 0
chr2:88857491|88857668 hsa-miR-4793-3p 1 0 0
chr2:88857491|88857668 hsa-miR-6728-3p 1 0 0
chr2:88857491|88857668 hsa-miR-6815-3p 1 0 0
chr2:88857491|88857668 hsa-miR-6740-5p 1 0 0
chr2:88857491|88857668 hsa-miR-185-5p 1 0 0
chr2:88857491|88857668 hsa-miR-1266-3p 1 0 0
chr2:88857491|88857668 hsa-miR-4694-5p 0 1 0
chr2:88857491|88857668 hsa-miR-584-3p 0 1 0
chr2:88857491|88857668 hsa-miR-4727-3p 1 0 0
chr2:88857491|88857668 hsa-miR-2355-3p 1 1 0
chr2:88857491|88857668 hsa-miR-7151-5p 0 1 0
chr2:88857491|88857668 hsa-miR-6777-3p 1 0 0
chr2:88857491|88857668 hsa-miR-6838-3p 1 0 0
chr2:88857491|88857668 hsa-miR-1207-5p 1 0 0
chr2:88857491|88857668 hsa-miR-6787-5p 1 0 0
chr2:88857491|88857668 hsa-miR-6865-5p 1 0 0
chr2:88857491|88857668 hsa-miR-6743-5p 1 0 0
chr2:88857491|88857668 hsa-miR-6815-5p 1 0 0
chr2:88857491|88857668 hsa-miR-6797-5p 1 0 0
chr2:88857491|88857668 hsa-miR-10396b-5p 1 0 0
chr2:88857491|88857668 hsa-miR-449c-5p 0 1 0
chr2:88857491|88857668 hsa-miR-34b-5p 0 1 0
chr2:88857491|88857668 hsa-miR-5008-3p 1 0 0
chr2:88857491|88857668 hsa-miR-4723-3p 0 1 0
chr2:88857491|88857668 hsa-miR-500b-5p 1 0 0
chr2:88857491|88857668 hsa-miR-6744-3p 0 1 0
chr2:88857491|88857668 hsa-miR-323b-5p 1 0 0
chr2:88857491|88857668 hsa-miR-6876-3p 1 1 0
chr2:88857491|88857668 hsa-miR-3619-5p 1 1 0
chr2:88857491|88857668 hsa-miR-494-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr2:88857491|88857668
ORF Type ORF1
Protein Length 47
Nucleotide Length 141
Protein Sequence MKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDS
Nucleotide Sequence TTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGCCCTCCAATCGGGTAACTCCCAGGAGAGTGTCACAGAGCAGGACAGCAAGGACAGC

CircID chr2:88857491|88857668
ORF Type ORF2
Protein Length 31
Nucleotide Length 96
Protein Sequence MSLLSCSVTLSWELPDWRALSTFHCTLASLG
Nucleotide Sequence CTGTCCTTGCTGTCCTGCTCTGTGACACTCTCCTGGGAGTTACCCGATTGGAGGGCGTTATCCACCTTCCACTGTACTTTGGCCTCTCTGGGATAG

CircID chr2:88857491|88857668
ORF Type ORF3
Protein Length 53
Nucleotide Length 159
Protein Sequence MLCDTLLGVTRLEGVIHLPLYFGLSGIEVIQQAHNRGSSRFQLLIRWREDEDR
Nucleotide Sequence CTGCTCTGTGACACTCTCCTGGGAGTTACCCGATTGGAGGGCGTTATCCACCTTCCACTGTACTTTGGCCTCTCTGGGATAGAAGTTATTCAGCAGGCACACAACAGAGGCAGTTCCAGATTTCAACTGCTCATCAGATGGCGGGAAGATGAAGACAGA

CircID chr2:88857491|88857668
ORF Type ORF1
Protein Length 26
Nucleotide Length 78
Protein Sequence MSGRWITPSNRVTPRRVSQSRTARTA
Nucleotide Sequence CTGAGTGGAAGGTGGATAACGCCCTCCAATCGGGTAACTCCCAGGAGAGTGTCACAGAGCAGGACAGCAAGGACAGCA

CircID chr2:88857491|88857668
ORF Type ORF2
Protein Length 26
Nucleotide Length 78
Protein Sequence MSLLSCSVTLSWELPDWRALSTFHSD
Nucleotide Sequence CTGTCCTTGCTGTCCTGCTCTGTGACACTCTCCTGGGAGTTACCCGATTGGAGGGCGTTATCCACCTTCCACTCAGAT

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites