CircRNA Information

General Information
circRNA Basic Information
CircID chr2:96809416|96809587
Strand -
CircType exon
Host Gene ENSG00000158158.10;
Algorism CIRI2;
Sequence TTGGCCGAGAAGTCTGAGCTGCCTGTGGTGGACGAGACCACAACTCTTCTCAACGAGCGTAACTCCTTGCTGCACAAAGCCTCCCACGAGAATGCCATCTGACAGGAGGGCCCGGGGCCCCCTGCCCACCCTGCGGGGGCCTCCCCAGTGGGCCCACATGAAGAGAGGGAAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr2:96809416|96809587 hsa-miR-107 0 0 1
chr2:96809416|96809587 hsa-miR-580-5p 0 0 1
chr2:96809416|96809587 hsa-miR-580-3p 0 0 1
chr2:96809416|96809587 hsa-miR-541-5p 0 0 1
chr2:96809416|96809587 hsa-miR-541-3p 0 0 1
chr2:96809416|96809587 hsa-miR-939-5p 0 0 1
chr2:96809416|96809587 hsa-miR-939-3p 0 0 1
chr2:96809416|96809587 hsa-miR-1236-5p 0 0 1
chr2:96809416|96809587 hsa-miR-1236-3p 0 0 1
chr2:96809416|96809587 hsa-miR-1253 0 0 1
chr2:96809416|96809587 hsa-miR-1256 0 0 1
chr2:96809416|96809587 hsa-miR-1307-5p 0 0 1
chr2:96809416|96809587 hsa-miR-1307-3p 0 0 1
chr2:96809416|96809587 hsa-miR-296-5p 0 0 1
chr2:96809416|96809587 hsa-miR-299-3p 0 0 1
chr2:96809416|96809587 hsa-miR-654-5p 0 0 1
chr2:96809416|96809587 hsa-miR-140-3p 0 0 1
chr2:96809416|96809587 hsa-miR-1207-5p 0 1 1
chr2:96809416|96809587 hsa-miR-574-3p 0 0 1
chr2:96809416|96809587 hsa-miR-642 0 0 1
chr2:96809416|96809587 hsa-miR-103 0 0 1
chr2:96809416|96809587 hsa-miR-1300 0 0 1
chr2:96809416|96809587 hsa-miR-602 1 0 0
chr2:96809416|96809587 hsa-miR-663a 0 1 0
chr2:96809416|96809587 hsa-miR-3188 1 1 0
chr2:96809416|96809587 hsa-miR-4296 0 1 0
chr2:96809416|96809587 hsa-miR-4322 0 1 0
chr2:96809416|96809587 hsa-miR-4265 0 1 0
chr2:96809416|96809587 hsa-miR-3937 1 0 0
chr2:96809416|96809587 hsa-miR-4692 0 1 0
chr2:96809416|96809587 hsa-miR-3150a-3p 0 1 0
chr2:96809416|96809587 hsa-miR-6892-3p 1 0 0
chr2:96809416|96809587 hsa-miR-6799-5p 1 0 0
chr2:96809416|96809587 hsa-miR-6089 1 0 0
chr2:96809416|96809587 hsa-miR-3192-5p 1 0 0
chr2:96809416|96809587 hsa-miR-4653-3p 0 1 0
chr2:96809416|96809587 hsa-miR-6721-5p 0 1 0
chr2:96809416|96809587 hsa-miR-7110-3p 1 0 0
chr2:96809416|96809587 hsa-miR-6798-5p 0 1 0
chr2:96809416|96809587 hsa-miR-486-3p 1 0 0
chr2:96809416|96809587 hsa-miR-5008-5p 0 1 0
chr2:96809416|96809587 hsa-miR-642b-5p 0 1 0
chr2:96809416|96809587 hsa-miR-6824-5p 1 0 0
chr2:96809416|96809587 hsa-miR-6886-5p 0 1 0
chr2:96809416|96809587 hsa-miR-660-3p 0 1 0
chr2:96809416|96809587 hsa-miR-3944-5p 0 1 0
chr2:96809416|96809587 hsa-miR-4727-3p 1 0 0
chr2:96809416|96809587 hsa-miR-6515-3p 0 1 0
chr2:96809416|96809587 hsa-miR-5587-3p 0 1 0
chr2:96809416|96809587 hsa-miR-642a-5p 0 1 0
chr2:96809416|96809587 hsa-miR-1233-5p 1 1 0
chr2:96809416|96809587 hsa-miR-1273h-5p 1 1 0
chr2:96809416|96809587 hsa-miR-4763-3p 0 1 0
chr2:96809416|96809587 hsa-miR-6778-5p 1 0 0
chr2:96809416|96809587 hsa-miR-6865-5p 1 0 0
chr2:96809416|96809587 hsa-miR-1343-5p 1 0 0
chr2:96809416|96809587 hsa-miR-6756-5p 0 1 0
chr2:96809416|96809587 hsa-miR-6815-5p 1 0 0
chr2:96809416|96809587 hsa-miR-10401-5p 1 0 0
chr2:96809416|96809587 hsa-miR-6722-3p 0 1 0
chr2:96809416|96809587 hsa-miR-6780a-5p 1 0 0
chr2:96809416|96809587 hsa-miR-4728-5p 1 0 0
chr2:96809416|96809587 hsa-miR-1909-3p 0 1 0
chr2:96809416|96809587 hsa-miR-328-5p 1 0 0
chr2:96809416|96809587 hsa-miR-6735-5p 0 1 0
chr2:96809416|96809587 hsa-miR-6885-5p 1 1 0
chr2:96809416|96809587 hsa-miR-3085-5p 1 0 0
chr2:96809416|96809587 hsa-miR-10396a-3p 0 1 0
chr2:96809416|96809587 hsa-miR-10396b-3p 1 1 0
chr2:96809416|96809587 hsa-miR-6724-5p 1 1 0
chr2:96809416|96809587 hsa-miR-3059-5p 1 0 0
chr2:96809416|96809587 hsa-miR-6843-3p 0 1 0
chr2:96809416|96809587 hsa-miR-5588-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr2:96809416|96809587
ORF Type ORF1
Protein Length 33
Nucleotide Length 102
Protein Sequence LAEKSELPVVDETTTLLNERNSLLHKASHENAI
Nucleotide Sequence TTGGCCGAGAAGTCTGAGCTGCCTGTGGTGGACGAGACCACAACTCTTCTCAACGAGCGTAACTCCTTGCTGCACAAAGCCTCCCACGAGAATGCCATCTGA

CircID chr2:96809416|96809587
ORF Type ORF2
Protein Length 53
Nucleotide Length 159
Protein Sequence MSCLWWTRPQLFSTSVTPCCTKPPTRMPSDRRARGPLPTLRGPPQWAHMKRGN
Nucleotide Sequence CTGAGCTGCCTGTGGTGGACGAGACCACAACTCTTCTCAACGAGCGTAACTCCTTGCTGCACAAAGCCTCCCACGAGAATGCCATCTGACAGGAGGGCCCGGGGCCCCCTGCCCACCCTGCGGGGGCCTCCCCAGTGGGCCCACATGAAGAGAGGGAAC

CircID chr2:96809416|96809587
ORF Type ORF3
Protein Length 32
Nucleotide Length 99
Protein Sequence MGRPPQGGQGAPGPPVRWHSRGRLCAARSYAR
Nucleotide Sequence CTGGGGAGGCCCCCGCAGGGTGGGCAGGGGGCCCCGGGCCCTCCTGTCAGATGGCATTCTCGTGGGAGGCTTTGTGCAGCAAGGAGTTACGCTCGTTGA

CircID chr2:96809416|96809587
ORF Type ORF4
Protein Length 53
Nucleotide Length 159
Protein Sequence MWAHWGGPRRVGRGPRALLSDGILVGGFVQQGVTLVEKSCGLVHHRQLRLLGQ
Nucleotide Sequence ATGTGGGCCCACTGGGGAGGCCCCCGCAGGGTGGGCAGGGGGCCCCGGGCCCTCCTGTCAGATGGCATTCTCGTGGGAGGCTTTGTGCAGCAAGGAGTTACGCTCGTTGAGAAGAGTTGTGGTCTCGTCCACCACAGGCAGCTCAGACTTCTCGGCCAA

CircID chr2:96809416|96809587
ORF Type ORF5
Protein Length 32
Nucleotide Length 96
Protein Sequence MAFSWEALCSKELRSLRRVVVSSTTGSSDFSA
Nucleotide Sequence ATGGCATTCTCGTGGGAGGCTTTGTGCAGCAAGGAGTTACGCTCGTTGAGAAGAGTTGTGGTCTCGTCCACCACAGGCAGCTCAGACTTCTCGGCC

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites